Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------AHL20(2)                                                                  ----------->GT1                                                                  <---------YAB1                                           --------->GLK1(1)    -------->HAHB4                               --------->REM1(1)                --------->YAB1                            ===============HOX2a_HOX2a     --------->AHL20(2)     --------->YAB1         ------>ZmHOX2a(2)             --------->YAB1 <---------AHL20(2)     <---------ICU4       --------->ARR11(3)--------->ARR11(3)  <---------ICU4  --------->YAB1          <---------ARR11(3)<---------ARR11(3) --------->ICU4 --------ICU4           <---------ATHB12   <---------GLK1(1) --------->YAB1                <---------YAB1 ------YAB1           --------->YAB1------>ZmHOX2a(1)   --------->AHL20(2)--------->AHL20(2)---------   atattgataatgacacaatttctctaatgatctacatcctcgtggaaatcttgttttttaaaataataatgaaaaattatttatcaaatgcttataatcg  2989000                                                                                <---------YAB1                                                                              <---------ICU4                              --------->ATHB12                                --------->YAB1                             <---------ATHB12                                <---------YAB1     <----------DOF2    --------->YAB1      <----------DOF2   --------->bZIP60(1)           <-------- >YAB1                 --------->AHL20(2)<---------ARR11(3)   <---------bZIP60(1)           ---------   tttcattcttttggattcaatgccattaaaaatcattcgacaatttctttttggtaacttcttgatgtcatactacataatcatagttgatgagtttgta  2989100                                                                                                  <--                                                                                                  <--                                                                                           <---------AHL20(1)                                                                                           --------->AHL20(1)                                                       --------->CCA1(2)                   --------->ARR11(3)                        <---------YAB1       --------->GLK1(2)                             <---------ARR11(3)                     <---------YAB1   --------->ANAC55(1)         ------->TEIL           <---------AHL20(1)                     <---------MYB52(1)  <-----------GT1   <---------AHL20(2)      ----------->GT1<-- -------AtSPL8      --------->TOE2(3)<-------MYC3     <---------ARR11(3) --------->DAG2  --------->AHL20(1) ------>AtSPL8     ----------->GT1   ------->MYC3     --------->ARR11(3)---------->DOF2  <---------AHL20(2)   caaaacttgaatagtttgatatcgttattagaagtaacacatgtaacaatcttggagatataaaaatgaatataaaaagtgtattttgtaaaatattttt  2989200                                                                                       --------->ATHB12                                                                                      <---------YAB1                                                                 --------->YAB1       <---------AHL20(2)                                                                <---------YAB1     <---------AHL20(2)                                                               <---------ARR11(3)  <---------AHL20(1)             --------->ANAC58                            --------->TOE2(3)         --------->AHL20(2)          ----------->TGA1                              <---------ANAC46          --------->YAB1     --------->ATHB51<---------YAB1                     <---------ZAT6     ---------->DOF2    <---------YAB1 <---------AHL20(2)                   <---------ANAC58--------->ANAC46 <---------YAB1    --------->AHL20(2)                   ----------->GT1 --------->ANAC58        ----- -------TOE1(3)   --------->ICU4  <---------TOE2(3)     <---------ANAC58--------->ANAC58        ----- -------TOE2(3)   <---------AHL20(2)          <---------YAB1   --------->ARR11(3)<---------YAB1 ----- -------YAB1 --------->ANAC58   ---------->DOF2  <---------WOX13(1) ---------->DOF2--------->AHL20(1)   aagattattattgtgacgaaattatttttgtataaaaaggtttagaatttgatagatagcgttaatatcataaaacgcaaagtattatattattgatcac  2989300                                                                                         <-----------RAV1(1)                                                                                        <---------TOE2(3)                                                                                  --------->LBD16                                          --------->KAN4(1)                      <---------ANAC46                                --------->ICU4                                   <---------HSFB2a(2)         ----------->GT1        <---------AHL20(2)            ----------->GT1    --------->HSFB2a(2)     <---------ZAT6      ---------->DOF2 <---------KAN4(2)    <----------ID1    <---------LBD16 ---->ANAC58     --------->ANAC55(2)  <---------TOE2(3)      ----------->GT1  <---------SPL7 ---->ANAC58     <---------ANAC55(2)  <---------YAB1       ---------->DOF2   <---------ANAC58       - ---->ANAC46    <-------TEIL    --------->AHL20(2)    ---------->DOF2        <---------ANAC58    ----   accattagagtgagtaaatacatatttgaaagaaaaaattaagaatgttcagactaaaaagaaaaggaaaaatgttttggcttccggataaatgttgggg  2989400                                  ----------->GT1                                  --------->LBD16                                 --------->ANAC58                                 --------->ANAC55(2)                                 <---------ANAC55(2)                                 --------->ANAC58                                                  --                                <---------LBD16                                                 <----                          --------->At4g35610                                               ---------                          <---------At4g35610                                             <---------ARR14(2)                         --------->ALFIN1                                                <---------SPL7                        <---------PCF2                                                  --------->DEAR3(1)                       <---------ANAC58                                                <------NtERF2-      <---------TOE2(3)<---------ANAC58                                               ------>NtERF2--     ---------->DOF2  <---------MYB46(3)                                             --------->DEAR3(1)   <---------YAB1    --------->ALFIN1                    --------->ICU4              <---------DEAR3(1)  --------->YAB1   --------->ALFIN1 *TSS    <---------ZAT14    <----------DOF2    <---------ANAC58 <- -------->ICU4  --------->DAG2<---------ARR14(2)     --------->At5g28300          <---------ANAC58 <- -------->CBF ---------->DOF2 --------->ARR14(2)    ----------->GT1            <----------DOF2  -----   tcaatattaaagaaataaaaggtgtgggtgctgatacggaaattagtttacaggctgtaatttttctttcaggctctctctctttcgtcgccgaaccagt  2989500                                                                                          --------->HSFB2a(1)                                                                                          <---------HSFB2a(1)                                                                                          <---------ZAT2                                                                                          <---------HSFC1(2)                                                                                          --------->HSFC1(2)                                                                                          <---------At4g35610                                                                                     --------->HSFB2a(2)                                                                                     <---------HSFB2a(2)                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                   --------->CCA1(2)                                                                                  <---------ARR11(3)                                                                                  --------->ARR14(2)                                                                                  --------->ARR11(3)                                                                                  <---------AGP1  ---------->DOF2                                                                 --------->AGP1 ------->HSFC1(1)                                                                 <---------ARR14(2) -----ARR14(2)                                                                   <---------CCA1(2) -------->AGL2                                                              <---------At4g35610 -------->LBD16                                                             --------->At4g35610 ------->HSFB2a(2)                ---------->DOF2                     =====================HOX2a_HOX2a --------HSFB2a(2)               --------->AHL20(2)                   ====================HOX2a_HOX2a --------HSFC1(1)                <---------AHL20(2)          <---------GLK1(2)  ----------->ARR10 <-- ---->ARR14(2)            <-----------GT1      ------>ZmHOX2a(1)      ------>ZmHOX2a(1)   --------->At4g35610   tccagaaaggctgtagcgattcaaaatttcacaaattaaagtcttcttcctctccgaatcagagattgtctccttcttagctcagatctgggagcttctt  2989600                                                                                 <---------ETT(2)                                                                                 <----------ID1                                                                           <---------TOE1(1)                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                 --------->SPL7  --------->ETT(2)                                                      ------>ZmHOX2a(2)    <---------TOE2(1)                                                    <---------ARR14(2) --------->ANAC58   --------->At4g35610                                             --------->WRKY38(1) <---------------------WRI1                                          <---------ZAT6     <---------------AtSPL8       <---------LBD16    --------->ARR11(1)          --------->GLK1(2)   --------->ARR14(2) --------->ANAC58---------->DOF2 <---------WOX13(1)        ------>ZmHOX2a(2) --------->WRKY12<---------------AtSPL3   --------->MYB52(1) -------YAB1   --------->At4g35610 <---------YAB1   <---------AGP1<----------ID1--------->DDF1-------   gtgatagatttggaagaagatgactgtgatcgatattctgactagagttgactcgatctgtaagaagtacgacaagtacgatgtcgacaaacagcgggag  2989700              ----------------------->TaNAC69(2)           <---------DEAR3(1)         --------->LBD16                                                        <-----------GT1         ------>NtERF2                                                       <---------ICU4        <---------DEAR3(1)                                                   --------->AHL20(2)       <---------LBD16                                                       <---------AHL20(2)   <---------ARR11(3)                   <---------HSFB2a(1)                  --------->ATHB51   --------->ARR11(3)        ---------->ID1                                 <---------YAB1   --------->ARR14(2)    <---------ANAC58                                   --------->ICU4   <-----------ARR10     <---------ANAC58<----------DOF2               ----------->GT1  <---------CCA1(2)  <----------DOF2   <---------At4g35610     <---------At4g35610                <-- -->ATERF1(1) --------->ICU4 <---------CCA1(2)                 --------->At4g35610      <----------DOF2   gccaatatctccggcgatgatgcctttgctcgtctctatggagctttcgaaacccaaatcgagaccgctctcgaggtaattatttctcttctttctgttt  2989800                                       --------->LBD16                                     <---------LBD16                                     --------->SPL7                                   <---------SPL7                                   <-----------HVH21                                <---------LBD16                               <-----------GT1                                              <------NtERF2 -------AtLEC2                <-----------GT1        <-------TEIL               ----------->GT1   gcatcacaatgttgaacatagagtttgatatttttccggtccggacttaaatggatgcatgagtccaattcagtcaaaaaacttgaaaataggtcgcgat  2989900  Previous    Next  AGI:  At3g09740.1    Description:  SYP71 (SYNTAXIN OF PLANTS 71). Identical to Syntaxin-71 (SYP71) [Arabidopsis Thaliana] (GB:Q9SF29); similar to SYP72 (SYNTAXIN OF PLANTS 72) [Arabidopsis thaliana] (TAIR:AT3G45280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18137.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012) Range:  from: 2989436    to: 2991666    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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