Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->ANAC58                                                                      --------->ANAC58                                                                      --------->ANAC46                                                                      --------->ANAC55(1)                                                                      --------->ANAC55(2)                                                                --------->YAB1                                                               <<<<<<<<<ARR2                                                               <---------ATHB12       >>>>>>>>>MYB98                                          <<<<<<<<<ARR1     ------>ZmHOX2a(1)                                       --------->WOX13(1)    <---------MYB59                                          --------->YAB1 <---------WRKY18(1) ------MYB46(1)                            --------->TOE2(3)--------->MYB46(3)    ---------->DOF2 ------MYB83                          --------->MYB46(3) --------->REM1(1) --------->WRKY38(1) ----YAB1                   --------->GLK1(2)       ----------->GT1   <---------ANAC55(2)   ctaggtcctaacccatgctaaatttcagagaatttgatcatccatcgttaagaagcgttacaacaatcatacacgtattgaccaaaatgctcgaacataa  2987600                                                                                                -----                                                                                              -------                                                                                            <--------                                                                                           ------->MYC3                                                                                           <-------MYC3                                                                                          --------->ANAC58                                                                                          <---------O2                                                                                          --------->TGA1a                      --------->TOE1(3)                                                   --------->O2                      --------->TOE2(3)                                                   --------->ANAC58                    --------->ARR14(2)                                                    ===========                    --------->ARR11(3)                                 <---------ALFIN1   <---------TGA1a                    <---------ARR11(3)                               ----------->RAV1(1)  ===========                    --------->GLK1(2)                             --------->ANAC58      <---------ALFIN1                    <---------ARR14(2)                            --------->ANAC46   --------->ANAC58         --------->ANAC58     --------->LBD16                     --------->ANAC58   --------->ANAC58         --------->ANAC58   <---------LBD16              <------ZmHOX2a(2)           --------->ANAC46    --------->DAG2 --------->GLK1(1)                    <---------ARR11(3)         <---------ANAC58   ---------->DOF2 <---------CCA1(2)   --------->AtLEC2 --------->ARR11(3)         <---------ANAC58   acaaaaaaagctcgcaatcgcaaatcttaaaccggaacatcatgcatcaaaaccagaagatcagactcaagcaacacataagattacgagccacgcgtga  2987700                                                           <-------TEIL                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 <---------AGP1       --------->MYB52(1)                        --------->AGP1     <---------MYB52(2)                          <-----------ARR10 ----->DOF2                                      <---------ARR14(2) ---->HVH21                                      --------->ARR14(2) -ANAC46              --------->At4g35610        <---------ARR11(3)                  ------>ZmHOX2a(2) ======bZIP_DOF    ---------->DOF2               --------->ARR11(3)     ----------->GT1      -------- ======bZIP_DOF   <------ZmHOX2a(1)             <---------CCA1(2)     --------->MYB52(1)     --------   aagagtagcaaacgattgtaggaaagcagaattgagacagagtcaaacgcagatctagcgattcatcgtgagtaacgaaaaatttgatctcagacaagga  2987800                                                                    <----------DOF2                                                                   <---------ANAC58                                                                   <---------ANAC46                                                                 <---------RRTF1(1)                                                                 ------>NtERF2                                                                 <---------ORA47(2)                                                                 <---------RAP2.3(1)                                                                 <---------ERF1                                                                <---------RRTF1(3)                                                                <---------ANAC46                                                                <---------RAP2.3(2)                                                                <---------RRTF1(2)                                                                <---------RAP2.6(2)                                                                <---------DEAR3(1)                                                                <---------RAP2.3(3)                                                         ------>NtERF2                                                        --------->RAP2.6(2)                                                        ------>NtERF2           <---------TOE2(1)                                                       <---------RAP2.6(2)    --------->CCA1(2)                                                      <---------At4g35610   --------->At4g35610                                                      --------->At4g35610   <---------ZAT2                               --------->ZAT18        <---------LBD16       --------->ZAT2  <--------                               ----------->HVH21  --------->GLK1(2)<---------ANAC58        <---------At4g35610      <---------ETT(2)       <---------------AtSPL8  <-----------RAV1(1)    <---------At4g35610------     <--------P   <---------ARR11(3)             <---------GLK1(2)<------NtERF2 <---------TOE1(1) ->ANAC58         --------->ARR11(3)       --------->REM1(1)    <---------DREB2C(2)        --------->At4g35610 ->ANAC58 ---------->DOF2   --------->ALFIN1--------->TOE2(3)  --------->RAP2.6(3)       --------->YAB1   aacacaggtagacaaagagagatattcagagaggggacagaacttacatcaaattctgcggccatggcggcgtttcggagctacgaggttatcagcaccg  2987900                                                                           <------MYB83                                                                           <------MYB46(1)                                                                          --------->MYB59                                                                          *TSS<---------WRKY38(1)                                                                          <---------AtMYB61                                                                  ------->GAMYB           <----------DOF2    <------NtERF2                                              --------->MYB52(1)     <--------P   --------->LBD16                                          --------->ANAC58  <---------WRKY12  --------->DEAR3(1)                                        --------->ANAC46 --------->WRKY18(1) <---------LBD16                           ---------->DOF2  --------->ANAC55(2)      <-------GAMYB -ALFIN1           --------->At4g35610  --------->ANAC58    --------->ANAC58 ------------>CBF      -- --->DEAR3(1)      <---------ZAT2       --------->ANAC58  --------->ICU4 <--------P ----------->GT1--   ctcgccggagaaaatatagacagcttgaagacgagttttgccaagaaaagactcatagccataagtaacagcaaggttggtcaatggggttactttgcaa  2988000                                                   --------->HSFB2a(2)                                                   <---------HSFB2a(2)               <---------AHL20(2)                                             <-----------GT1                        <---------AHL20(1)            <---------ARR14(2)           ------->TEIL                               --------->AHL20(2)            --------->ARR14(2)        --------->ANAC58           ------->GAMYB      --------->AHL20(1)           <------ZmHOX2a(1)        <---------ANAC58           -------->P------------>CBF    <------- ------->AHL20(2)    <---------CCA1(2)--------->ANAC58 <---------At4g35610          <---------AHL20(2) ------->YAB1     <-----------GT1   <---------ANAC58 --------->REM1(1) ----------->HVH21<-----------GT1   attataaactataggatttgtttctatcttcgattttggcatgcattttacttctacaactgatcaaccccgcttgacaattgaaatttatttctctttg  2988100                                       ------>MYB46(1)                                       ------>MYB83                                     --------->AtMYB61                                    <---------ATHB12                                    --------->MYB46(3)                                    <---------MYB55(2)                                   --------->ANAC58                                   ------>MYB46(1)                                   ------>MYB83                                   --------->ANAC58                                   -------->P  ----------->HVH21                           <------MYB83                                  --------->MYB55(1)            --------->AHL20(2)         <------MYB46(1)                    <---------------AtSPL8 ------>ZmHOX2a(1)    <---------AHL20(2)         ----------              <---------AHL20(2) <---------MYB111(2)       --------->ARR11(3)        --------->AHL20(2)              <---------YAB1     <---------MYB46(2)        --------->AHL20(1)        <---------AHL20(2)             --------->AHL20(2)  <---------MYB59           <---------AHL20(1)     <----------DOF2             <---------AHL20(2)  <---------MYB111(1)       <---------ARR11(3)<-----------GT1       <-         <---------ICU4          --------->MYB46(3)      ------->TEIL     <-----------GT1 --------->MYB59 ---DOF2<---------ATHB12   --------------->AtSPL8     <---------ATHB12 ------->TEIL --------->AHL20(2)   attttggcaaatcattttaattgtagtactaagtaccaaccaatcctacttgacaaatgaatatttttaaatgtattttcaacccttttaatttggtata  2988200                                                                 <---------AHL20(2)                                                                --------->AHL20(1)                                                           <---------AHL20(1)                                                           --------->AHL20(1)                                                           <---------AHL20(2)                                                      --------->AHL20(1)                                             ----------->GT1    <---------AHL20(2)                                             <------MYB46(1)    --------->AHL20(2)                                             <------MYB83  --------->AHL20(2)                  <---------YAB1          <---------MYB52(1)<---------AHL20(2)               <---------AHL20(2)   --------->ARR11(3)<---------AHL20(2) ->GT1   <----------DOF2           --------->YAB1--------->AHL20(2)<---------TOE2(3)        --------- --------AHL20(2)<-----------GT1 <---------WOX13(1)   --------->AHL20(2)             ----------->GT1   ttttaaaaaaactttatattatcaattcaaatttgaatgatatcgtttggttaaaataaaataaaatttaatgtgatattagactactagtaaaacgaaa  2988300                                                       <---------ICU4                                                       --------->ATHB51                      <-----------------AGL1           -------->HAHB4                      <-----------------AG             <--------ATHB1                     <---------WRKY18(1)               --------->ATHB12                    --------->WRKY38(1)               <---------AHL20(2)                    ----------->HVH21          ----------->GT1                    --------->WRKY12          <---------TOE2(3)            --------->AHL20(2)                <---------TOE1(3)                                 -----            <---------AHL20(1)                <---------YAB1                              <----------            <---------AHL20(2)             <---------YAB1                               --------->YAB1            --------->AHL20(1)            --------->AHL20(2)   <---------ARR14(2)    --------->WOX13(1)         --------->YAB1                   <---------AHL20(2)   --------->ARR14(2)  <---------ATHB12 ----------->GT1 --------->ATHB12   <-----------GT1   --------->AHL20(2)  --------->YAB1--------->AHL20(2) -->GT1--------->AHL20(2)        <---------KAN4(2)    <---------ATHB51   <---------YAB1<---------ATHB51   atatagcaaaataataaaatggttgacccatttggaataaacatttttatggttaaataattgaaaatatgcaaaatgataacaaatcaattatacaatt  2988400             <---------YAB1          <---------AHL20(2)                                                --------->ARR11(3)         --------->YAB1                                            <---------AHL20(2)        <---------YAB1                                             --------->AHL20(2)      --------->YAB1                                               --------->AHL20(1)      <---------ICU4                                               <---------AHL20(1)      -------->ATHB1       <---------AHL20(2)                     --------->AHL20(2)     --------->AHL20(2)   <---------AHL20(2)                   <---------ICU4     --------->AHL20(1)   <---------AHL20(1)                   --------->ATHB51     <---------AHL20(2)   --------->AHL20(1)                   <--------HAHB4     --------->ICU4       --------->AHL20(2)                   -------->ATHB1  <---------AHL20(2)   --------->AHL20(1)                      --------->YAB1  --------->AHL20(2)   <---------AHL20(2)                      --------->AHL20(2) --------->AHL20(2)    --------->AHL20(2)                     <---------YAB1<---------ARR11(3) <---------AHL20(1)   <---------ATHB51                        <---------ATHB12 --------->YAB1       --------->ICU4                          --------->ICU4<---------GLK1(2)      -- <---------AHL20(2)   <---------AHL20(2)                      <---------ATHB51             --------->AHL20(2) ---->AHL20(2)--------->YAB1                    <---------GLK1(2) <---------AHL20(2)     ----------->GT1 -GT1<---------YAB1   --------->AHL20(2)      --------->AHL20(2) <---------YAB1        ---------->DOF2   caataaaattattatatcatagaaataatttattctcaaacaaaacaaaaaattctcatatgcaattattaaattagagatttttcatcaaaagtaaata  2988500  Previous    Next  AGI:  At3g09735.1    Description:  DNA-binding S1FA family protein. Identical to DNA-binding protein S1FA3 (S1FA3) [Arabidopsis Thaliana] (GB:Q93VI0); contains InterPro domain DNA binding protein S1FA; (InterPro:IPR006779) Range:  from: 2986631    to: 2987974    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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