Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->YAB1                          --------->ICU4                          <---------YAB1                     --------->YAB1                                                  <----------DOF2                    <---------YAB1                                                <---------ANAC46                  --------->ATHB51               <---------AHL20(2)               <---------ANAC58                 <---------YAB1                 <---------AHL20(2)                <---------ANAC58               <---------ICU4          --------->TOE2(3)                      <---------ANAC58              --------->ICU4           <----------DOF2    --------->ARR11(3)  <---------ANAC58 ------          <---------ALFIN1<---------ATHB12      --------->AHL20(2)     <---------ANAC55(2)    ------- ------GLK1(2)<---------YAB1           --------------->AGL15           --------->ANAC55(2) <---------YAB1   attcttgttccctcacattattattgtaatcatagaaaatactttaaaaattaaatggaagacattgtattatacgtatgccttgcgttttttgtaattg  2958300                   ------->PIF5                   <-------PIF5      --------->AHL20(2) --------->At4g35610    <---------TOE2(3) <---------ANAC46  --------->AHL20(2)  <---------ANAC58                      --------->TOE1(3)                 -------  <---------AHL20(2)  <---------ANAC58                      --------->TOE2(3)                <------- ----->GT1     --------->ZAT18                        <---------ICU4                         -------- -->ICU4       <---------ZAT18                       --------->AHL20(2)                      <-------   ttaattaatgaaataagagcacttgcttgctgaaactaaaaaactcttacaacaattcattaccttcatatagtttgaaggctagtaatctcacaatgat  2958400                                                     ------->TEIL                                               <-----------GT1                                           <---------YAB1                                         <---------ICU4          ----------->GT1                                        --------->ICU4        <--------ATHB1                                      --------->AHL20(2)      <---------ICU4                                     --------->AHL20(2)       --------->YAB1                                    <---------AHL20(1)       --------->ICU4                                 <---------AHL20(2)  <---------ARR14(2) -->YAB1            <---------YAB1 --------->YAB1    --------->ARR14(2)                          ---- --ATHB12           <---------TOE2(3)<---------AHL20(2)      <---------ATHB12        ---------->DOF2 ->ICU4        <---------ZAT6    --------->AHL20(2)  <---------ARR11(3)      ---------->DOF2 <------- --YAB1 ---------->DOF2         --------->AHL20(2)  <---------CCA1(2)     XXXXXXXXXXXXXXXXXXXX>MIR829.2   aaactatattgaaagttgtgttatcgttgaaaaattaaaataatttttatttctgtatcttcaatgatggtaaacaaatgaaagcttcaaagtttatttt  2958500                                                    <---------AHL20(1)                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                                   --------->YAB1                                                  <---------YAB1                                   <-                                                <--------HAHB4                               <-------                                                --------->YAB1                              <--------                            --------->ETT(2)    <---------ICU4                           <---------RVE1(1)                            <---------ETT(2)   <---------YAB1                           <---------ARR11(3)                     <---------AHL20(2)        --------->ICU4                  --------->AHL20(1)  <-                  --------->ARR11(3)         <---------ICU4                    <---------AHL20(2)  <-    <---------LBD16  <---------YAB1          --------->YAB1                    --------->AHL20(2)  <- ------->GT1      <---------ARR11(3)        <---------ATHB12              --------->AHL20(2)--------- --YAB1          --------->YAB1    <---------ARR11(3)<---------YAB1<----------DOF2      --------->ARR11(3)   tgtaaattcggaaaacgaatgatattattgtctacaatttcttcaaatcatcattataattgttttgctcttttgaaaaaataaaatggagatattaatt  2958600 --------AtLEC2 --AHL20(2) -AHL20(2) --------ANAC46           <---------ALFIN1  --------->KAN4(1) --------ANAC58   <---------bZIP60(2)       <---------KAN4(1)                       *TSS --------ANAC58 ------>NtERF2   <----------DOF2                  <-----------GT1 <---------ALFIN1   < >AHL20(2)     --------->DEAR3(1)          <---------KAN4(2)<----------DOF2 --------->ZAT14       ---   tgcttgaactcaaaacgacgacgtagcacaactcctttccactcgaataatccatttggaggctttttttcattacagaacacacactctctctccaatg  2958700                                 <---------ICU4                                 --------->YAB1                                <---------YAB1                             --------->TGA2(2)                           <---------O2                           --------->TGA1a                           <---------bZIP60(1)                           <---------TGA1a                           --------->bZIP60(2)                           --------->O2                           --------->bZIP60(1)                           --------->TGA2(1)                           <---------TGA2(1)                           =============================================bZIP_DOF                           --------->ANAC46                           --------->ANAC58                          <-----------STF1                         ------>NtERF2                        --------->DEAR3(1)                        ----------->HVH21                    ---------->DOF2            <---------ARR11(3)                  ------>NtERF2 --------->ICU4            --------->ANAC58             <---------CCA1(2)                 ----------->HVH21                  ------>ZmHOX2a(1)                 <---------MYB52(1)           --------->KAN4(2)<-----------TGA1    <---------ARR14(2)                   --------->LBD16         ------->TEIL--------->AtMYB61          --------->ARR14(2)                 <---------LBD16 ---------MYB59  --------->DEAR3(1)           <---------DEAR3(2)         --------->TOE2(3) ---->TEIL<---------KAN4(1)--------->ANAC58 ---------->ID1--------->ANAC58  <-----------GT1<---------   gacctaaaatgaacattctccgacctccgacgtcatcatcatcttcgtcgtttcctccatacccaaagcccgtttcattaacccctccggtatctttcac  2958800                                                                                  --------->LBD16                                                                                  ------>NtERF2                                                                                 --------->ANAC46                                                                                --------->SPL7                                                                                <---------LBD16                                                                               <---------ATERF1(1)                                                                               ------>NtERF2                                                                              --------->DEAR3(1)                                               ------>MYB83                  --------->ATERF1(1)                                    ------>MYB83                            ------>NtERF2               ---------->DOF2      ------>MYB46(1)                         <------NtERF2          ------->GAMYB            --------->ANAC46    --------->ETT(2)     <---------ATERF1(1)       <---------ALFIN1--------->ZAT14       --------->AtMYB61            --------->SPL7            -       --------->AtMYB61          --------->MYB46(3)   <---------ETT(2)   <-----------------AGL1    -      <---------ALFIN1 --------->At4g35610   --------->DEAR3(1)        ------->GAMYB<---------ALFIN1-    --------->ANAC46   <---------ZAT14      --------->MYB46(3)        --------->MYB46(3)           -- -DOF2--------->MYB46(3)       <-----------GT1 ------>MYB46(1)      --------->MYB52(1)            <--   tctcatccacaaccccataaacctctgctctataaacccaccattcaccaacgctggtcgaccaattttccaacggtccgcctccggcactgctaatagc  2958900                                                      --------->MYB52(1)                                                   --------->ANAC58       --------->ARR11(3)                          --------->ANAC46              --------->ANAC58       <---------ARR11(3)                          --------->ANAC58              --------->ANAC58  --------->DEAR3(1)                       --------->ARR14(2)      <----------DOF2 ----->NtERF2                              <---------ARR14(2)   --------->ARR11(3) -------->At4g35610      <---------ZAT18<---------ANAC46 ------->GAMYB           --------->ANAC46 -------->LBD16     <---------ANAC58    <---------ANAC58--------->MYB46(3)      <---------LBD16 ------->DEAR3(1)   <---------ANAC58    <---------ANAC58<---------MYB52(2)     ------>ZmHOX2a(1) -------LBD16    <----------DOF2<-----------HVH21 ------->GAMYB <---------ARR11(3)--------->LBD16 <XX   tccgccgaagacctctcgtctttcttgggctctccctcagaggcgtattcaacacacaacgaccaagagcttttgtttctcctccgcaatagaaaaaccg  2959000                                     --------->LBD16                                   ----------->RAV1(2)                               --------->At4g35610                               <---------At4g35610                            <---------ATHB12                       <<<<<<<<<GATA-3                                           --------->WOX13(1)   <---------ANAC58    <<<<<<<<<GATA-4      -------->P                   <---------ARR11(3)   <---------ANAC58    <<<<<<<<<GATA-1      ------>MYB46(1)              --------->ARR11(3) ------->TEIL          <<<<<<<<<GATA-2    <---------MYB59               --------->YAB1      --------- XXXXXXXXXXXXXXXXXXMIR843  --------->ANAC46 ------>MYB83  <---------MYB52(1)   <---------YAB1   atgaagcttgggctaagtatgttcaatccactcatctccctggaccaacttgtcttagccgtttagtttctcaattatcttatcaatccaaacccgagag  2959100                                    <---------ATHB12                                    <---------MYB52(2)                                --------->LBD16                               --------->ANAC46                               --------->ANAC58                               --------->ANAC58                              <---------LBD16                             <---------ATERF1(1)                            <---------ALFIN1                            --------->DEAR3(1)                           --------->DEAR4(2)                           <------NtERF2                           --------->ATERF1(1)  <-------TEIL                                    -----                          ------>NtERF2      ----------->RAV1(2)                              -------                          <---------ATERF1(1)--------->At4g35610                              <------                         --------->ANAC58    <---------At4g35610                           <---------At4g35610            --------->GLK1(2)------>NtERF2   <---------ZAT2                                <---------ZAT2       --------->ZAT18   --------->ANAC46    --------->ZAT2                                <------NtERF2      --------->ANAC58   --------->ANAC58   ------>NtERF2                                  --------->At4g35610      --------->ANAC58 --------->TGA1a      <---------ATERF1(1)                            <---------ZAT14  --------->TGA1a      --------->ANAC58    <-----------RAV1(2)                          --------->RAP2.6(3)  --------->ANAC58     --------->ANAC58 --------->ANAC46                         --------->ANAC58  --------->ANAC58     --------->ANAC46 --------->ANAC58                         --------->ANAC46  <---------TGA1a   ------>ZmHOX2a(1)   --------->ANAC58                         --------->ANAC58 >LBD16<---------ZAT18 <---------TGA1a ------->TEIL      ----------->HVH21      ------>ZmHOX2a(1)   tctcacgcgcgcacaatctatcctcacgcgcctccgcaatgaacgccagctgcatcgccttgacgctaattccctcggtctcctcgccatggctgcagcg  2959200  Previous    Next  AGI:  At3g09640.1    Description:  APX2 (ASCORBATE PEROXIDASE 2); L-ascorbate peroxidase. Identical to L-ascorbate peroxidase 2, cytosolic (APX2) [Arabidopsis Thaliana] (GB:Q1PER6;GB:Q39006;GB:Q67XB1;GB:Q9SF39); similar to APX1 (ASCORBATE PEROXIDASE 1) [Arabidopsis thaliana] (TAIR:AT1G07890.8); similar to APX1 (ASCORBATE PEROXIDASE 1) [Arabidopsis thaliana] (TAIR:AT1G07890.7); similar to APX1 (ASCORBATE PEROXIDASE 1), L-ascorbate peroxidase [Arabidopsis thaliana] (TAIR:AT1G07890.5); similar to unknown [Populus trichocarpa] (GB:ABK93180.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Plant ascorbate peroxidase; (InterPro:IPR002207); Range:  from: 2956161    to: 2958332    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g09650.1    Description:  HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G03100.1); similar to hypothetical protein OsI_035906 [Oryza sativa (indica cultivar-group)] (GB:EAY81947.1); similar to pentatricopeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95579.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18040.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 2958684    to: 2961304    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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