Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->MYB46(3)                      <------NtERF2                          ----                 --------->ANAC58                         --------->ATERF1(1)                 -------             ------>NtERF2 --------->ZAT14               <---------RAP2.6(3)                  <------MYB83            <---------ATERF1(2)                          <---------ATERF1(1)                  <------MYB46(1)            <---------RAP2.6(2)                          ------>NtERF2                     <---------ANAC58            --------->ATERF1(2)      --------->ANAC58    <------NtERF2                     <---------ANAC58            <---------DEAR3(1)--------->ANAC46          --------->DEAR3(1)                 <---------ANAC46 --------->MYB52(1)  <<<<<<<<<<<<<<<<<LFY               --------->RAP2.6(2)               <-------TEIL ------>ANAC46<------NtERF2<---------ZAT18             <---------RAP2.6(2)                <---------MYB46(3) ------>ANAC55(2)--------->ANAC58    --------->ANAC58  --------->ATERF1(1)               --------->ALFIN1 -------GT1 <----------ARF1<---------ZAT14  <----------DOF2           ----------->GT1 --------->ALFIN1   acataacgacatgggcggcaagcacccagtggacacaacaaggtacctttgttcttggccgccctctaattcgggtgaaattggaagagaggtgcttggt  2946000                    <---------MYB46(3)                 <------MYB83                 <------MYB46(1)                 <---------ANAC58                 <---------ANAC58             <---------ARR14(2)             --------->ARR14(2)          <---------ANAC58                                                       <---------At4g35610          <---------ANAC58                          <---------ARR11(3)    <---------ICU4          <---------ANAC46                          --------->ARR11(3) ------>MYB46(1)          <---------ANAC55(2)                     --------->MYB59      ------>MYB83          <---------ANAC55(1)                     <-----------------------TaNAC69(2)          --------->ANAC55(2)                   <<<<<<<<<MYB1    --------->MYB46(3)           <------      <------ZmHOX2a(1)                         <<<<<<<<<MYB2  --------->MYB52(1)--------->At4g35610 ------>TaMYB80 <-----------RAV1(1)  ------->TEIL ----------->ARR10  <---------MYB59          ------- ---->GT1<-------TEIL        --------->CCA1(2)  <---------MYB52(1)------->GAMYB<-----------RAV1(2)<--   atatactaggatgcgtatttggtgcttagagatttgatgaaactgaagcagttagatattagagacaacgacctaatatttgcaggtgaagagttcagct  2946100        <-----------RAV1(2)       <---------MYB52(1)      <------NtERF2              <----------DOF2          <---------TOE2(3)      ------>NtERF2             <---------ANAC58         ---------->DOF2                 <---------TOE2(3)     --------->ANAC46           <---------ANAC58     --------->ANAC58                  --------->AHL20(2)     --------->ANAC58           <---------ANAC46     --------->ANAC58              <---------AHL20(2)     --------->ANAC58      <---------AtLEC2         <---------TOE1(2)              <---------YAB1 ---At4g35610          <---------ANAC58          --------->ANAC46        <---------ZAT18---------->DOF2 -->At4g35610          <---------ANAC58          --------->ANAC58     --------->MYB59  <---------AHL20(2) --------DOF2      ---------->DOF2               --------->ANAC58<---------TOE2(3) --------->AHL20(2)   cttttgtccgccaggtttttccaaagcttgtatggcttgatggccacaaactcgcaagttaaagataaatgttaggccacttgttttaattaaagtataa  2946200                                                      ------->MYC3                                                      <-------PIF5                                                      <-------PIF4                                                      <-------MYC4                                                      ------->MYC4                                                      ------->PIF5                                                      ------->MYC2                                                      ------->PIF4                                                      <-------MYC3                        ---------->DOF2                                                      <-------MYC2                       <------ZmHOX2a(1)                                                     --------->ANAC46                   <------MYB46(1)       <---------MYB52(1)                            --------->ANAC55(2)                <------MYB83     <---------ANAC58              ---------->DOF2 <------------OsbHLH66              <--------P ----     <---------ANAC58    <---------AtLEC2          <---------ALFIN1                --------->ALFIN1  <----------DOF2 <-------TEIL   --------->YAB1   <---------REM1(2)              <---------bZIP60(2)   aactctttcgtttttttggattcattttcatgaaatcaaaagactacaagtctacacgtgcttcaagcttgaggctctaaatgaagtggtaggaaagaat  2946300                                                                                              <------                                                                                          --------->ZAT18                                                                                          <---------ZAT18                                                                                        ------->MYC3             --------->DAG2                                                             <-------MYC3            ---------->DOF2                                                            --------->O2        --------->AHL20(2)                            --------->ANAC46                 <---------O2        --------->YAB1                               -------->P                    ------>NtERF2     --------->YAB1                      ---------->DOF2                           --------->LBD16    <---------YAB1            <------MYB83           ------>MYB83--------->ANAC46 --------->ANAC58    --------->ICU4            <------MYB46(1)        ------>MYB46(1)              --------->ANAC46  --------->YAB1             <---------AtMYB61     <---------MYB59                --------->ANAC58 ----->AHL20(2)   ----------->GT1      <------ZmHOX2a(2)      <-------TEIL       <---------LBD16   <-   gaaataataataaaaaaagtcagaaaaatggatggtctgagatcaaagtgaaacctactccacatacacatcccaacttcttccccgccatgtggacttt  2946400                                                                                 --------->GLK1(1)                                                                                 <---------GLK1(1)                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                           <------NtERF2 ------->GAMYB                                                                          <-----------HVH21                                                                          <---------RAP2.6(3)                                                                          ------>NtERF2 --------->MYB46(3)                                                                         --------->RAP2.3(3)        <                                                                        <------NtERF2 --------->MYB52(1)                                                                        --------->RAP2.3(1)    ------                                                                        --------->ATERF1(1) ---------           *TSS                                                        ------>NtERF2 --------->TOE1(2)       <---------TOE1(2)                                               <---------ATERF1(1)  ---------      ------>ZmHOX2a(1)                  <----------DOF2               <---------RAP2.3(1) ------->TEIL   <-----------GT1                 ----------->RAV1(2)                --------->DEAR3(1)<---------MYB52(2) ----DOF2<----------DOF2         --------->REM1(1)     --------->MYB52(1)--------->DEAR3(1)--------->SPL7 ---------DOF2                   <---------ALFIN1   --------->YAB1    <---------DEAR3(1)<---------MYB55(2)   tctttttcctactttctctctctgcattctctcttacacctgtctttatctgaaaaataaccgatgagctcgtcgccgtcaagaaatccaacgaacgccg  2946500                 ------>MYB83                 ------>MYB46(1)            <---------ALFIN1            --------->AtMYB61           --------->MYB46(3)          <---------ATERF1(1)          ------>NtERF2       --------->LBD16       <---------ATERF1(1)       ------>NtERF2      --------->ANAC58      --------->ANAC58      --------->ANAC46      --------->DEAR3(1)   --------->DEAR3(1)   <---------ALFIN1   --------->AtMYB61   <---------LBD16      <-------TEIL                                     -------- ------->TEIL  --------->AtMYB61         <---------HSFB2a(1)                                 <------- ---------ALFIN1----------->RAV1(1)   <------NtERF2                                          -------- --->DEAR3(1) --------->MYB46(3) ----------->HVH21                                           <------- >ANAC58 --------->DEAR3(1)      --------->ALFIN1            <------ZmHOX2a(1)   --------->ANAC58 >ANAC58 <---------ALFIN1      <-----------RAV1(1)   ---------->DOF2             --------->ANAC58   aagcacctccgccaccaccaacatcgacggatgctgtggcagagggttcgtctaagaaagtgaggaaaccatataccatcaccaagtcaagagagagctg  2946600                                               <---------AHL20(2)                                            --------->AHL20(2)                                            <---------AHL20(2)                                            --------->ATHB51                      <---------ANAC58      <---------ICU4                                          -    <------ZmHOX2a(1) <---------ANAC46      <--------ATHB1                                          < ->ZAT2               <---------ANAC58     <---------ATHB51                                    ------ --ZAT2  --------->ZAT18 ---------->DOF2   --------->ICU4                                      <----- ->At4g35610--------->ANAC58             --------->YAB1                                     <-------- --At4g35610--------->ANAC58          ----------->GT1                                       ---------   gacagaggaagagcacgataagtttcttgaagcacttcaactgtaataatttatctctgtttctctgtttttagagacttcaaatttcttagtttgctgc  2946700                                                                                                 <---                                                                                            ---------                                                                                        <---------ARR14(2) -------->GLK1(1)            --------->MYB46(3)             <---------AtMYB61           --------->GLK1(2) ---------GLK1(1)         <---------ZAT14           <---------ANAC58                    --------->ARR11(3) --->At4g35610 --------->MYB52(2)                   <---------ANAC58                    --------->ARR14(2) ----At4g35610 --------->MYB59                <---------TOE2(3)                         <---------ARR11(3) -At4g35610  <---------MYB52(1)--------->MYB52(1)<<<<<<<<<MYB98  <---------HSFB2a(2)   --------->RVE1(1) >At4g35610 ------------>MYB.PH3(2)   <------ZmHOX2a(1)     --------->MYB59        --------->YAB1----   tgatttctgagtttagttagttatagactgaacaaacagaggaaagtttatgttacttagcttaggtctagtagtaacttagctataaaaaatctgctta  2946800              <---------ANAC46        ------>ZmHOX2a(2)       <------ZmHOX2a(2)       --------->CCA1(2)       --------->ARR14(1)      --------->AGP1      <---------AGP1      --------->ARR11(3)      <---------ARR11(3)      <---------ARR14(3)      --------->ARR14(3)                   <---------YAB1      --------->ARR14(2)                <---------AHL20(2)      <---------ARR14(2)            <---------AHL20(2)     --------->RVE1(1)              <---------AHL20(1)              <---------YAB1    ----------->ARR10               --------->AHL20(1)  <---------DAG2                 <---------MYB59  ---------->DOF2                --------->YAB1     --------->WRKY38(1)    <---------REM1(1)   <----- ------At4g35610     <---------ALFIN1  --------->AHL20(2)     ---------->DOF2 ------->TEIL<---------GLK1(2) >At4g35610 <----------DOF2   ----------->GT1    <---------ANAC46 <---------ZAT6    <------ZmHOX2a(1) ----->At4g35610    <---------ZAT18 --------->AHL20(2)  <----------DOF2   <---------TOE2(3)    ------   gctaaaaagatctgcttcttggagcacttcaactgtaataaatttatagttgtgttgactttttgaaagtgttattgatgtaactaggacctgattctgc  2946900  Previous    Next  AGI:  At3g09600.1    Description:  myb family transcription factor. similar to LCL1 (LHY/CCA1-LIKE 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G02840.3); similar to MYB transcription factor [Catharanthus roseus] (GB:ABL63122.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 2946411    to: 2949000    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version