Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ANAC46                                                   --------->ANAC58                                                   --------->ANAC58                                                --------->ZAT18      --------->ARR11(3)                                          --------->YAB1        <---------AHL20(2)                                     <-------TEIL  <---------MYB52(2)<---------ARR11(3)                                    --------->ARR14(1)     <---------ATHB12                                    --------->CCA1(2)     ------>MYB46(1)                                   --------->ARR11(1)     ------>MYB83                                   <---------ARR14(2)   <---------MYB59         ----------->GT1                                   --------->ARR14(2) ------->TEIL  --------->RVE1(1)     --------->At4g35610   <-------TEIL  <---------YAB1--------->MYB46(3)      ----------->GT1 ->GT1 <----------DOF2    --------->CCA1(2)     <---------ZAT18 --------->AHL20(2)   atcaaacagctttcaaattgttggaaagatacaacgagatacgatgatagcccacgaaccaaacatttaaaaatctcagagtcggaaaatcgaaatcaac  2939100                          --------->GLK1(2)                     ----------->GT1                   <---------At4g35610                    <----------ID1                   --------->At4g35610 --------->YAB1   --------->MYB52(1)            --------->GLK1(1) <---------HSFB2a(2)    --------->ANAC58            <---------GLK1(1) --------->LBD16        --------->ANAC58          <------ZmHOX2a(1)   --------->HSFB2a(2)  <------NtERF2        --------->MYB59   <---------ARR14(2)    <---------LBD16     <---------GLK1(2)    --------->ARR14(2)  --------->ANAC46  --------->GLK1(2)<---------YAB1   ttacacagattaggaactctgagcggagaatccgagaaaaatcaaaacacggcggaagaaacgacgaatcagtaatcgagattactattgaaaatgaaat  2939200                                                                                                   <-                                                                                         <---------LBD16                                                                                         --------->HSFB2a(2)                                                                                         <---------HSFB2a(2)                                                                                     --------->ARR11(3)                                --------->ATHB12                            ----------->GT1       <--                  ------>ZmHOX2a(1)                                        ----------->GT1     ------                  <---------------AGL15               ----------->GT1     <--------P <---------GLK1(2)             <---------CCA1(2) <---------AHL20(2)    ----------->GT1     <-------GAMYB--------->GLK1(2)       <---------AHL20(2)      <---------YAB1      --------->LBD16<---------AHL20(1) <---------ARR14(2)     <---------TOE2(3)     <---------GLK1(2)      <---------LBD16 --------->AHL20(1) --------->ARR14(2)  --------->AHL20(2)       <---------ICU4        <---------LBD16  --------->ARR11(3) <---------ARR11(3)  <---------AHL20(2)     <---------TOE2(3)      <---------LBD16--------->AHL20(2)  ----------->ARR10   ggattttaatgaattgtatcctatactaagaatttcattgaaatttctctctcgggggataaaaaaaaaatattgggttgataaaaagattctcggaatt  2939300                                                          <---------MYB46(3)                                                          --------->MYB55(2)                                                         --------->ALFIN1                   <--------                 --------->ARR14(2)                     <---------MYB52(1)                 <--------P                <------ZmHOX2a(1)                   -------->P                            <-------GAMYB    ---------->DOF2                                 --------->MYB52(1)             ---------->DOF2 <---------TOE2(3)      <----------DOF2          <---------At4g35610            <------ZmHOX2a(1) --------AHL20(2)<---------ARR14(2)            ----------------->AGL1          <----------ID1 -------YAB1 --------->DAG2 <---------ANAC58  <---------At5g28300             ----------->GT1 --->ICU4   ---------->DOF2 <---------ANAC58 <-----------GT1              ---------->DOF2<---------MYB46(3)   tttaatgaaagtcaaaaaggatttgtctttgcttcgacgattgtattttaccgctaccggtgggagagatttataagaaagaggaaaaagatggttgttt  2939400                             ------->TEIL                      ------>NtERF2                      --------->LBD16                     --------->ANAC46            <---------------AGL15                           ----                     --------->ANAC58            ====================================================                     --------->ANAC58           <---------ANAC58                       ----------->GT1                  --------->ARR14(2)            <---------ANAC58                  --------->ALFIN1                  <---------ARR14(2)            <---------ANAC46            --------->REM1(2)    <---                <---------AHL20(2)           <---------WOX13(1)            ----------->HVH21    <----               <---------AHL20(2)         <---------YAB1         <---------At4g35610 --------->ALFIN1 -MYB46(3)     --------->AHL20(2)        --------->At5g28300 *TSS--------->At4g35610<------ZmHOX2a(1)   tggataaccagaacaaattaaatccgccatgaacttaagagactgtaattgcttatataagatgatgagatgactctgtgaagggaggagggagaattac  2939500                                      <---------------AGL15                                  <---------ANAC58                              <------------CBF                             --------->ATHB51                             --------->ATHB12                             <---------ICU4                             -------->ATHB1                             -------->HAHB4                            <---------YAB1                                               <---------ANAC58                            <---------ATHB51                                             <---------ANAC58                            --------->ICU4         <---------DAG2                   <---------KAN4(2)  <---------HSFC1(2)     ------------>ATHB5    <---------ZAT18                      --------->ARR14(2)  --------->HSFC1(2)     --------->ICU4        --------->ZAT18            --------->TOE2(2) ----->HSFB2a(2)       ----------->GT1--------->HSFB2a(2)   <-----------GT1         ---------->TaMYB80 =====================================================MADS_MADS           --------->TOE1(2)      <--- ------HSFB2a(2)      ---------->ID1  <---------HSFB2a(2)  --------->GLK1(1)        <---------ARR14(2) -----ANAC55(2)  <----------DOF2  <---------ANAC58 <----------DOF2   <---------AHL20(2)<---------YAB1   gagaagggtctctcttcgacttttgtcgtaattattgcttctctaagagggtacttttggtatttccatattaaaacctgcgaaagaatatgcttgattt  2939600                              <---------AHL20(2)                             <---------ARR11(3)                             --------->AHL20(1)                             <---------AHL20(2)                             --------->AHL20(2)                             <---------AHL20(1)                             --------->ARR11(3)                          --------->AHL20(2)                         <---------AHL20(2)                  <----------DOF2              <---------ARR14(2)                            <---------DAG2       <---------DAG2   ---------->DOF2      --------->AHL20(2)               <---------ALFIN1        <----------DOF2 --------->ANAC46 --------->At4g35610                 <-----------GT1   <---------AHL20(2)       ---- --------GT1  --------->ARR14(2)<---------AHL20(2) <---------TOE2(3)    --------->AHL20(2)    -------   tacacaaaagaaaacaaatatgctgaattaatatatttttgaccacaaaaattaagtttccaccttttttttgtttaaatctactttttaaaacaacgtt  2939700          <---------AHL20(2)        <---------YAB1       <---------AHL20(2)       <---------AHL20(1) --------->YAB1                                                           <-     <---------YAB1      <---------YAB1                 ----------->GT1                           --- ----->AHL20(2)<-----------GT1                      --------->AHL20(2)                    <---------AHL20(2) -->TOE2(3)  <-----------GT1<---------YAB1          <---------AHL20(2)   ---------->DOF2  --------->AHL20(2)   taaatctattatttttttcacttcttgatgataaatgagaaaatagttttataaaaaattgaaatatagtcttggtaaagacataagtgaaattaatcta  2939800                                                                                              <------                                                                                          --------->KAN4(2)                                                                                         <---------KAN4(1)                                                        <---------KAN4(2)                --------->KAN4(1)                                                        ---------->TaMYB80       --------->ARR11(3)                                                 <---------TGA1a                 <---------ARR14(2)                                                 --------->TGA1a                 --------->ARR14(2)                                                 <---------O2                   --------->GLK1(1)             --------->AHL20(2)             --------->WRKY38(1)                 <---------GLK1(1)         <-------TEIL                       --------->ZAT18           --------->ANAC58   <----------TaMYB80  <---------AHL20(2)    ===================================bZIP_DOF   --------->ANAC58  ---------->TaMYB80  --------->AHL20(2)    ---------->DOF2     <---------ZAT18           --------->ANAC46  <---------KAN4(2) --------AHL20(2) ----------->GT1        <---------ANAC46  <---------YAB1       <---------CCA1(2) ------>AHL20(2) ------------------------>ANAC81 --------->O2      ------>ZmHOX2a(2) ----------->GT1   ttaaataaatgttcataaaatagagaaaaagaaaatgggatagtcgtggactcgtgggaatattagtgatccacacaatagcatatctggtatattcttt  2939900    --------->ANAC58    --------->ANAC58                 <---------AHL20(2)    --------->ANAC46                 <---------AHL20(1) --------->ARR14(2)                  --------->AHL20(1)         ----------->GT1 <---------ARR14(2)                  --------->AHL20(2)     <---------AHL20(2)    --------->ANAC58 <---------REM1(2)       <---------AHL20(2)                --------->YAB1         --------->ANAC58 ----DOF2            <---------AHL20(2)               <----------DOF2--------->ICU4               ---   gtctatacgcaaaatcaatttgtttatttagttagccaatttattgtgttcaatctctttataaaaatgtaaaaatttgaaaataagcatcgttcacaag  2940000  Previous    Next  AGI:  At3g09560.1    Description:  lipin family protein. similar to lipin family protein [Arabidopsis thaliana] (TAIR:AT5G42870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66777.1); contains InterPro domain Lipin, N-terminal conserved region (InterPro:IPR007651); contains InterPro domain LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209) Range:  from: 2934622    to: 2939461    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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