Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------GLK1(2)                       <---------ICU4                             --------->AHL20(2)                       <---------ATHB12            <---------ALFIN1 <---------AHL20(1)                     --------->WOX13(1)         --------->RAP2.6(2) <---------AHL20(2)              --------->AHL20(2)       ------>MYB83          --------->AHL20(1)              <---------AHL20(2)       ------>MYB46(1)       --------->ARR11(3)          <---------YAB1--------->YAB1     <---------ALFIN1 --------->ANAC46                  --------->AHL20(1)     --------->MYB46(3)      <---------ARR11(3)         <---------AHL20(1)    <---------At4g35610     --------->AHL20(2)          <---------AHL20(2)           <----------ID1 ----->ALFIN1     <-----------HVH21                     --------->AHL20(2)         ---------->DOF2 --------RAV1(1) <----------DOF2                       --------->AHL20(2)     ---------->DOF2   tgttgcaccagcctccaccctttcactcaaatatattctcatccccatctaaactcattatatttaaattcaatcaatacaaaagaaaagacaaatacct  2900600                                                             <---------ZAT2                                                             --------->ZAT2                                                             <---------HSFB2a(1)                                                             --------->HSFB2a(1)                                                             <---------HSFC1(2)                                                             --------->HSFC1(2)                              --------->HSFB2a(2)           --------->ANAC58                            <------ZmHOX2a(2)           --------->ANAC46               <----------DOF2<---------HSFB2a(2)       --------->ANAC58             <---------At4g35610           ---------->DOF2  --------->ANAC58             --------->At4g35610 --------->ARR14(2)     --------->ANAC58          --------->LBD16             --------->ZAT2<---------ARR14(2)         <-----------RAV1(2)        --------->ANAC46             <---------ZAT2--------->ARR14(2)     <---------PCF2                --------->ZAT18        --------->ANAC46   --------->AGP1<---------YAB1--------->LBD16          <---------LBD16        --------->ANAC58   --------->ARR11(3)    <---------SPL7             --------->MYB52(1)        --------->ANAC58   <---------ARR11(3)  --------->ALFIN1     --------->AtLEC2               --   ccaaatgaacaagccagctttgggagccagatccagaaccctcatgaaagtggtacccaggcaagcttccatccaaacaaactgcgcaattgaatcaatt  2900700                                                                                       --------->ANAC46                                                                                     <---------ALFIN1                                                                       ------>ZmHOX2a(1)                                                                 --------->ANAC46   --------->ZAT14                                                                 --------->ANAC58<---------At4g35610                     --------->DAG2                    ------------>AtMYB77  <----------DOF2        - --------->GT1      ---------->DOF2             <------ZmHOX2a(1)--------->ANAC58--------->At4g35610<   tcagttaaaaatccaaacttgcaaaagtgtaagacaaaaaaaaaacgagaggattagtaacagttacaagctcctctctctttagctacactcgacaact  2900800                                                   ----------->HVH21                                                   --------->ZAT18                                                --------->ALFIN1                                            --------->At4g35610                           <---------WOX13(1) ============================MYC_MYB                         --------->ATHB12   <---------At4g35610                      --------->CCA1(2)    --------->MYB52(1)                     --------->ARR11(3)   <---------WRKY38(1)                     <---------ARR14(2)   <---------WRKY12                  ==========================HOX2a_HOX2a                  ===========================HOX2a_HOX2a                  <------ZmHOX2a(1)       <---------WRKY45            =============HOX2a_HOX2a     --------->WRKY18(1)            =======================HOX2a_HOX2a            ------>ZmHOX2a(2)        <------ZmHOX2a(2)                  ------>ZmHOX2a(2)           ==============HOX2a_HOX2a<---------ARR14(2)               <---------PCF2     <------ZmHOX2a(1)           <------ZmHOX2a(2)        --------->ARR14(2)            --------->ALFIN1      =============          --------->ARR14(2)     <------NtERF2------->GAMYB     <---------TGA1a        ----------->GT1          <---------ARR14(2)   ----------------->AGL1           ===========================bZIP_DOF<-    <---------WRKY18(1) <---------YAB1------>ZmHOX2a(2)         <---------O2          ----------->GT1 -------->At4g35610  --------->ARR14(2) <-----------HVH21     <---------ZAT14   ---------->DOF2    == ---------At4g35610  <---------ARR11(3) <--------ZAP1    <---------GLK1(2)   >>>>>>>>>TBF1    -------   tcagcttgaccagatcgctaggagatatgattggccgagatcggtcaacggaggggacagagtctgaagtgggatcgaagaagaaagagaggaaaaaaac  2900900        ------->TEIL     --------->ANAC46     <---------ANAC55(2)     --------->ANAC55(2)     --------->ANAC58                                                    --------->TOE2(2)     --------->ANAC58    --------->ANAC46                         <---------At4g35610     --------->ANAC55(1) --------->ANAC58                 --------->MYB52(1) =====HOX2a_HOX2a        --------->ANAC58               --------->At5g28300 -----ZmHOX2a(2)    <----------ID1                  <---------ALFIN1     --------->TOE2(3) ==================HOX2a_HOX2a     <---------DAG2   --------->ANAC46     --------->TOE1(2) -->MYB52(1)------>ZmHOX2a(1)      <----------DOF2 <---------ZAT14--------->At4g35610   gatcaatacgcatcctatagaagcgacaagccagtcacttttagcccattttctacaccgtaacagagagctaaaccttggaatcgccattgaagaagat  2901000                                                                                             <-------                                                                                             <-------                                                                                           ----------                                                                                           --------->ATHB12                                                                                           --------->YAB1                                                                                          --------->ICU4                                                                                    -------->P                                                                                    ------>MYB83                          --------->ZAT14          <-----------GT1                  ------>MYB46(1)                          <---------ZAT14      --------->AHL20(2)     <------------CBF    <---------ATHB12                     <------ZmHOX2a(2)        --------->ICU4         --------->ATHB12 ------->GAMYB <                    --------->ARR11(3)        <---------YAB1        <---------YAB1 --------->MYB52(1)          ---------->DOF2*TSS            ----------->GT1   --------->HSFB2a(2) --------->At4g35610 --   >>>>>>>>>TBF1    <---------ARR11(3)  --------->AHL20(1)<---------LBD16    --------->MYB46(3)    <-   tagaagaagaatcaaaggaagagatcacttcactgtttcaaatatgttattatttacatctctgggactcacgattgcgacagcccaaccgaatgattaa  2901100                                                        --------->LBD16  --------->MYB52(1)                                   --------->ANAC46 --YAB1                                               <---------LBD16 --WOX13(1)               <---------AHL20(2)   <---------ARR11(3) ->GT1                   --------->AHL20(2)    --------->ARR11(3) ---------MYB59  <-----------GT1              <---------RVE1(1)              <----------DOF2 ------->ANAC55(2)--------->MYB52(1)---------->DOF2 <-----------GT1          <---------DAG2       --- --------ANAC55(2)<---------At5g28300     <------ZmHOX2a(1)       --------->YAB1      ---------->DOF2   tacataactgaaatcgaaattaccggtttaaattggttcaaagaggagagattttaaccggaatggaataagaagggacctttatgcctaaagcctctat  2901200                                                                                         <---------bZIP60(1)                                                                                         --------->bZIP60(2)                ----------->GT1                                                          --------->bZIP60(1)              <---------ANAC58                             --------->ANAC58             <------NtERF2              <---------ANAC58                     <---------RAP2.6(3)                  --------->ATERF1(1)          --------->GLK1(1)                        ------>NtERF2                      <---------bZIP60(1)          <---------GLK1(1)                      ---------->ID1         <---------DOF5.7(2)         <---------ARR14(2)                      <---------RAP2.6(2)   <---------ZAT18<---------ANAC58         --------->ARR14(2)                     <---------At5g28300    --------->ZAT14<---------ANAC58         <---------GLK1(2)                     <-----------GT1         <---------ZAT14--------->bZIP60(1)         <-----------ARR10              --------->ANAC58   --------->ANAC58           <---------ANAC46     <---------LBD16                    --------->ANAC58   --------->ANAC46    ------------>CBF <----    --------->MYB52(1)            --------->AHL20(2)     <---------AtLEC2    <----------DOF2    <---- --------->CBF<---------ANAC46    <---------AHL20(2) <----------DOF2   <---------WRKY38(1)<----------   cccaattagcggattttcgtgtaaatttgaatgtattaaaataagctatttgccgctttgcacgaaaaaacagtgaacgctttcaatggcgtcgtcatcg  2901300                                                                                       <---------At4g35610                                                                                 --------->At4g35610                                                                                 <---------At4g35610                                                                                --------->RAP2.3(2)                                                                                --------->DEAR3(1)                                                                                <---------DEAR3(1)                                                                               --------->RAP2.3(1)                                                                               --------->DEAR4(2)                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              --------->ABI4(1)                                                                              <---------ATERF1(1)                                                                              <---------RAP2.3(1)                                                                             --------->RAP2.3(3)                                                                             <---------ALFIN1                                                                             --------->RRTF1(2)                                                                             --------->RRTF1(3)                                                                             --------->RAP2.6(2)                                                                             --------->RAP2.3(2)                                                                             <---------DEAR3(1)                                                                             --------->DEAR3(1)                                                                             --------->ANAC46                                                                             --------->ATERF1(2)                                                                            --------->RAP2.3(1)                                                                            --------->ATERF1(1)                                                                            --------->DEAR4(2)                                                                            --------->RRTF1(1)                                                                            --------->ERF1                                                                            --------->RAP2.6(1)                                                                           <---------At4g35610                                                                           --------->At4g35610                                                                           --------->LBD16                                                                           <---------ATERF1(1)    ------>ZmHOX2a(2)                                                      <---------RAP2.3(1)      <    =====================HOX2a_HOX2a                                       ------>NtERF2           --   ======================HOX2a_HOX2a                             <---------MYB46(3)    <---------ZAT2   <------ZmHOX2a(2)                                             --------->ATHB12------>NtERF2     --   <---------GLK1(1)                                           <------NtERF2--------->ORA47(2)    ---  --------->ARR11(3)             ---------->DOF2               --------->At5g28300  <---------At4g35610  <---------ARR11(3)    <----------DOF2              <----------DOF2      --------->ANAC46        <-- -------TGA1        <---------ALFIN1            <---------At4g35610<---------WOX13(1)  --------->At4g35610 -------HVH21       --------->REM1(1)       --------->ANAC46 <---------DEAR3(1)--------->ATERF1(1)--- -TGA1            ------>ZmHOX2a(1)  --------->ARR11(3)     <---------ABI4(1)<---------ATERF1(2) <---   tcacgatctctggtttcttcctacacctttgatgagaaagacctagacgacgctgatttatgggcggtgattgattccgccgccgctgcagctactatcg  2901400                                                                                                 ====                                                                                                 ----                                                                  --------->ARR14(2)            -----                                                                  <---------ARR11(1)            <----                                                               <---------ANAC55(2)              =====                                                               --------->ANAC55(2)             ------                                                               <---------ANAC58                <-----         --------->ANAC46                                      <---------ANAC58                ------    <---------ARR14(2)                                         <---------ANAC46                <-----    <-----------ARR10                                   ----------->RAV1(2)                    <-----    --------->ARR14(2)     --------->ANAC55(2)         ------>NtERF2                           ------   <---------CCA1(2)       <---------ANAC55(2)        --------->ANAC58               --------->HSFC1(2) ------NtERF2              <------MYB83             <---------ATERF1(1)              <---------HSFB2a(1) ---->NtERF2<---------ARR14(2)                      ------>NtERF2<---------CCA1(2)   --------->HSFB2a(1) ------->LBD16             <------MYB46(1)         ----------->HVH21  ------>ZmHOX2a(1)       <------ ------>DEAR3(1)          --------->MYB59          --------->DEAR3(1) =============================== -------ATERF1(2)         --------->MYB111(1)    ------>ZmHOX2a(1)<---------ARR14(2) <---------HSFC1(2) ------>ATERF1(2)     <----------DOF2   <---------YAB1--------->DEAR3(1)   <---------ALFIN1   ------- ------LBD16--------->ARR14(2)        <-----------GT1 --------->ANAC58===============================   ccggcaaatctccgaaaccccttgctattaggtatccaaattacaattctcctccgacgcctgtttcgtatccttctccacagtcgaaaattcttcagat  2901500  Previous    Next  AGI:  At3g09410.1    Description:  pectinacetylesterase family protein. similar to pectinacetylesterase family protein [Arabidopsis thaliana] (TAIR:AT5G23870.3); similar to pectinacetylesterase family protein [Arabidopsis thaliana] (TAIR:AT5G23870.1); similar to pectinacetylesterase family protein [Arabidopsis thaliana] (TAIR:AT5G23870.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15643.1); contains InterPro domain Pectinacetylesterase (InterPro:IPR004963) Range:  from: 2897644    to: 2901025    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g09430.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO15639.1) Range:  from: 2901286    to: 2903078    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version