Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->ANAC58                                                                                       --------->ANAC46                                                                                 --------------------                                                                               <---------ALFIN1                                                          <------ZmHOX2a(2)  <---------ALFIN1                                                        --------->YAB1     <------ZmHOX2a(2)                                                      --------->ANAC58     --------->CCA1(2) -------->DOF2                                        --------->ANAC58    --------->AGP1 --------->YAB1 ------>AHL20(2)                                   <-------TEIL           --------->ARR14(2) -------AHL20(2)             ---------->DOF2     <-------PIF5             <---------ARR14(2) ---AHL20(1)              --------->AHL20(2)     ------->PIF5             --------->ARR11(3) -->AHL20(1)              <---------AHL20(2)    <---------At4g35610      <---------At4g35610 ---AHL20(2)       <---------At4g35610          --------->At4g35610      --------->At4g35610 -->AHL20(2) <---------ARR11(3)               <-----------RAV1(2)    <-----------HVH21 --------->ANAC58   ttaaagagactcgattatctctgcttatttaaaaaggcttcttcacttgcaggtgcaaggatcacacttgcagtcagatccacacttgcaagcatcgttc  2889800                                                                                                    -                                                                                                    -                                                                                                    =                                                                                                    -                                                     ------->GAMYB                                  -                                                    --------->ANAC58                                -                                                    --------->ANAC58                      <------NtERF2                                              <-------PIF5                               --------->LBD16                                              ------->PIF5--------->ANAC58              --------->DEAR3(1)                                             <---------ATERF1(1)                       <---------LBD16                                <---------GLK1(2)   --------->DEAR3(1)        <-------GAMYB   <------                              --------->ICU4 --------->LBD16                 <---------MYB46(3)     =                         --------->TOE2(1)   <---------DEAR3(2)             <---------AtMYB61 -------                 ----------->HVH21          <---------DEAR3(1) ======================================               ----------->RAV1(2)       --------->DEAR3(1)    ---------->DOF2======================= ->WRI1<-----------GT1   --------->TOE1(1) <---------LBD16--------->ANAC58  <---------TOE2(3) -------   tcagcgttgttactctcccctgaagcctcgtactgattcttcatcgccggtgcaacgcccaagacaaaagtctcagttgtggttgtctcgccggagaatc  2889900         <-------TEIL <-----------HVH21 -------->TGA1a                                                     --------->ARR11(3) -------->O2                                                        <---------ARR11(3) ============================MYC_MYB                      --------->YAB1 -------->ANAC58                                       ------>ZmHOX2a(1) -------->ANAC46                ---------->DOF2        ======================HOX2a_HOX2a -------->ANAC58          <---------MYB52(2)           =====================HOX2a_HOX2a ---ARR14(2)              --------->MYB46(3)          --------->TOE2(2)           ---------->DOF2 ==========================================bZIP_DOF   --------->TOE1(2) ----------->GT1 -->ARR14(2)            ----------->RAV1(1)        <---------ARR11(3) ------>ZmHOX2a(2)            <- =========bZIP_DOF   ------->GAMYB----------->GT1  <---------ARR14(2) ----------->GT1          <----- =========MYC_MYB  <---------At4g35610             --------->ARR14(2)<------ZmHOX2a(2)      ------->TEIL -->GLK1(2)        --------->At4g35610        <---------ATHB12     --------->GLK1(1)       <---------CCA1(2)   ccaagtcagggtacattttgcaactgcaacaatcgaaagaaaaaacccatcagtatcctatgaaaacagagatcgtgtaaattcaaaagagttgtatctt  2890000                                                                          --------->AtLEC2                                                                          --------->ANAC58                                                                          --------->ANAC58                --------->ANAC58                      <---------At5g28300 --------->ANAC46         <---------ARR11(3)                 <---------YAB1              <---------AtLEC2         --------->ARR11(3)               --------->YAB1                <---------ANAC58         ----   --------->ANAC58                    --------->GLK1(1)                <---------ANAC58         <---   --------->ANAC46       --------->YAB1--------->ARR11(3)      <---------ANAC58         ----------->GT1   --------->ANAC58<-----------GT1     <---------GLK1(1)        <---------ANAC58         --------->LBD16 ----------GT1  --------->ANAC58      <---------ARR11(3)   <---------MYB46(3)          <---------LBD16 -----DOF2      --------->ANAC46      --------->ARR11(3)   <-----------RAV1(1)       <-----------GT1   tttacaagaaaaatctccaagaaaccattcatcaaaacaagatatcatcatcgattcacagttgttgcatacttgcatgcaacgatttcaccggaaaata  2890100                                                          --------->CCA1(2)                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                            <---------ALFIN1       --------->LBD16                                           <---------ZAT18=========================HOX2a_HOX2a                                           --------->LBD16<------ZmHOX2a(2)                                          --------->RAP2.6(2)     --------->ANAC46                                   <------------AtMYB77  <---------ARR14(2)                                 <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------ARR14(2)                                --------->MYB46(3)  ------>NtERF2<---------LBD16       <---------ARR11(3)                              --------->ANAC46 <-------PIF5    --------->ARR14(2)    --------->ANAC58            <---------TGA1a   <---------ALFIN1 ------->PIF5 <---------ALFIN1         --------->ANAC58            <---------O2   --------->ANAC46------>NtERF2 --------->ARR14(2)     --------->ANAC46  ---            =====================MYC_MYB <xxxxxxxxxxxxxxxxsmallRNA(s)         <---------ALFIN1    <-- ----->AHL20(2)         -------->P --------->MYB46(3)    --------->AGP1 --------->ARR14(2)      ----- ------AHL20(2)        <-----------GT1<---------MYB52(1) <---------ARR11(3) ------>ZmHOX2a(1)   <----   taaatacaaacgagacgttggagacttaccctccacaaccgttgccgcacttgcagccagatccacatccgcagtttcctccacagcaagacatttttct  2890200                                                   --------->HSFC1(2)                                                   <---------ZAT2                                                   <---------HSFB2a(1)                                                   <---------HSFC1(2)                                                   <---------At4g35610                                                   --------->At4g35610                                                   --------->ZAT2                                                   --------->HSFB2a(1)                                         --------->ATHB12                                         --------->YAB1                                     <---------AHL20(2)                                          ----                                     --------->AHL20(2)                                         <----                                    --------->AHL20(2)       --------->AHL20(2)    <------------CBF ------>HSFB2a(2)                  *TSS<---------TOE2(3)     <---------AHL20(2)    <---------ICU4<--- -------HSFB2a(2)              --------->YAB1   <------ZmHOX2a(1)  --------->At4g35610<-----------GT1 ---->HSFB2a(2)           <---------YAB1<---------YAB1      --------->AHL20(2)   <---------YAB1 ----- -----HSFB2a(2)        <---------AHL20(2)-------->HAHB4----------------->AGL3    <---------TOE2(3) --   cgagaaaattcaaattgaagaaaaatttatgaatgaaaattaatgatagaggaagctcccaaatttataagctaaatgagattaatattgaccatacatg  2890300                                                                                        <------------ATHB5                                                                                        --------->ATHB51                                                                                        -------->ATHB1                                                                                        <---------ICU4                                                                                        <--------ATHB1                                                                                        --------->YAB1                                                                                       <---------ATHB51                                                                                       --------->ICU4                                                           <---------At4g35610  <---------MYB46(3)                                                           --------->At4g35610  <---------DEAR3(2)     <---------ATHB12                                    ---------->CDC5       <---------DEAR3(1) ------------>CBF                                  <-----------GT1         --------->SPL7         <-- ----->ALFIN1                                    <----------DOF2           <---------TOE1(2)    XXXXX ---MYC3                                     <---------ANAC58            <---------SPL7<---------ATHB12 --------RAV1(1)                             --------->ANAC55(2)        --------->TOE2(1)     <------ -->MYC3           <---------CCA1(2)         <---------ANAC58      <---------GLK1(2)------------>ATHB5 -------->ID1 <---------At4g35610 <---------ARR11(3)   --------->ANAC46 --------->TOE1(1)    >>>>>>>>   tgtcgcaatctttctccgctcttatctccaaaactagttcttcatttacgtctttaccctcagcgcattgattctcgtacgtcggttcaataattgtcca  2890400                 --------->ALFIN1                                --------->ANAC55(2)                 <---------ZAT6                                  <---------ANAC55(2)               <---------ANAC58                                  <---------ANAC55(1)       <--------ATHB1                                   --------->DEAR3(2)       --------->ATHB51                                --------->SPL7       <---------ICU4                                <---------ZAT14       -------->HAHB4                                <---------SPL7      --------->ICU4   <---------ANAC46             <---------ANAC58      <---------AHL20(2)                            <---------ANAC58      --------->AHL20(2)                       --------->HSFB2a(2) <---------MYB52(1)      <---------ATHB51 <---------ANAC58  <---------TOE1(2)       <---------ANAC46                   -      <---------ATHB12 <---------ANAC58  ------->TEIL--------->ZAT18                         <------- -------ZAT6   <---------ANAC46      <---------------AtSPL3      <---------ANAC58       <---------MYB52(1) XXXXXXXXXXXXXXX>MIR869.2     <------NtERF2--------->TOE1(2)     <---------ANAC58   <---------At5g28300 ---ZAT14      <---------ANAC58  <---------GLK1(2) <---------------AtSPL3 <---------AtMYB61---------- >>>>>>>>>LFY<---------ZAT14<---------ANAC46   <---------HSFB2a(2)--------->LBD16  <-----------GT1 <-   gtgttcaaataattgtggagtgtttgtgtgtcgtcgattcttgtacgttcgagagcgtaccgatgttccgtgtgttatggtcttatcaccgtttagattc  2890500                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)                <---------RVE1(1)               --------->ARR11(3)               <---------ARR11(3)               <---------AGP1               <---------ARR14(3)               <-----------ARR10                                                -------->HAHB4               --------->AGP1                                                   <---------ICU4               --------->ARR14(3)                                               --------->YAB1               --------->ARR14(2)                                              <---------YAB1     <----------DOF2                                                           --------->ICU4    <---------DAG2                          --------->TOE2(3)                --------->YAB1  ------>NtERF2<---------ARR14(2)   ------>ZmHOX2a(2)                       <---------YAB1 --------->DREB2C(2)               <------ZmHOX2a(2)              <---------ANAC55(1) --------->DEAR3(1)               <---------ARR11(3)              <---------ANAC46 -------->DEAR4(2)                --------->AGP1                  <---------ANAC58 --GLK1(2)    <---------CCA1(2)   --------->ARR11(3)  <---------ALFIN1    --------->YAB1 ->ARR10  --------->AtLEC2<---------LBD16<-----------GT1          <---------ANAC58 --------At5g28300<----------DOF2 <---------AGP1     <---------ZAT18     <---------YAB1             -   tcaccgcctttcatgcagatctttattctacggctagatctattaacctcagtcgtccacttggtatttcgtgtttttataataatcgtatatttgggtt  2890600                                                 --------->AHL20(1)                                       <---------ARR11(3)                                      --------->RVE1(1)                             <---------ARR11(3)  <---------AHL20(2)            <---------AHL20(2) >>>>>>>>>RAP2.2   --------->AHL20(2)           --------->AHL20(2)--------->ARR11(3) --------->AHL20(2)   --------->ZAT6           --------->RVE1(1)   <---------AHL20(2)                <---------ANAC58  --------->ZAT14           --------->CCA1(1)--------->YAB1                       <---------ANAC58  -  <---------ZAT14     <------ZmHOX2a(1)--------->ARR11(3)                        ---------->ID1  ---- -------->ETT(2)     ----------->GT1  --------->CCA1(1)                   <----------DOF2     -------   tgtctacactagataaaattagcaggaaaaatatctaaaaatatctataaaaaaattgtttgatattgttagacttcttttttgtcgtttctgatcaaaa  2890700  Previous    Next  AGI:  At3g09390.1    Description:  MT2A (METALLOTHIONEIN 2A). Identical to Metallothionein-like protein 2A (MT2A) [Arabidopsis Thaliana] (GB:P25860;GB:P43391); similar to MT2B (METALLOTHIONEIN 2B) [Arabidopsis thaliana] (TAIR:AT5G02380.1); similar to metallothionein-like protein [Brassica rapa] (GB:BAA11391.1); similar to Metallothionein-like protein type 2 (GB:P69164); contains InterPro domain Plant metallothionein, family 15; (InterPro:IPR000347) Range:  from: 2889492    to: 2890235    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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