Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------WRKY38(1)                                    <                                     --------->TOE2(2)                                              -                   --------->YAB1    --------->TOE2(3)                    --------->LBD16    --------                  <-------TEIL       --------->TOE1(3)                   <---------ANAC58    <-------              --------->LBD16        --------->TOE1(2)                   <---------ANAC46   ---------            <---------LBD16         <---------HSFB2a(1)  <---------ALFIN1<---------ANAC58 --------->YAB1     <---------MYB52(1)        <-----------GT1        <-----------GT1  ------>ZmHOX2a(1) --------->ICU4   caagtcccttaatctcccgattcatcactcttttgacaaccttcgagtcaacaatttctccacattcacattcctccgtgttcgaaatgctataatgatg  2802400                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  ---     --------->ARR14(2)                                                                          ----     <---------ARR14(2)                        <---------ZAT6                               ---------     <---------GLK1(2)                      <---------STY1(1)                               <--------    <------ZmHOX2a(1)                  ------->GAMYB                                      <---------- ---------At4g35610                   --------->MYB46(3)                                 <-------TEIL -------->At4g35610              <---------ANAC55(2)                                    --------->CCA1(2) ->YAB1         ----------->RAV1(2) --------->MYB52(1)                                 <---------ARR14(2) --ICU4     ---------->DOF2      --------->ANAC55(2)      <-----------GT1              <---------GLK1(2) >ICU4   <----------DOF2   ---------->DOF2  --------->STY1(1)                          --------->ARR14(2)   tctgcaggattctttaaagcctgagcaaacaaagtacttaacagccctagtgtcatcaattttcaacttcatatttctgaacttctcaagattcacactc  2802500    <-------TEIL   --------->CCA1(2)  --------->ARR14(2)  <---------ARR14(2) <------ZmHOX2a(1)                                                                               <--- --------TOE1(2)                                                                                 <--- --------TOE2(2)                                 <-------TEIL   <----------DOF2                  ---- --->ZmHOX2a(1)                                 <------ZmHOX2a(2)                                ---- ------>HSFB2a(2)                              --------->ARR14(2)           <---------MYB46(3)  ----- ----->TOE1(2)   <---------ANAC58              <---------ARR11(3)         <---------GLK1(2)     ----- >ZAT6           <---------ANAC46              --------->AGP1   ===================================== -ALFIN1         <---------ANAC58              --------->ARR11(3)       <---------YAB1         <----- -GT1      --------->ARR11(3)                  <---------ARR14(2)       --------->ICU4   ------>ZmHOX2a(1)   ctaggatacagtagaacttgcttacatgcttctgtctgaaaactctcaagatccatctctgaaacacttttgtaaagattgttgaaacatcctataccca  2802600                                                                                               <-----                                                                                             --------                                                                                             <------- ------TGA1a                                                                                 <------- ------O2                                                                                 ----------- ----->O2                                                                                ------------ ----->TGA1a              --------->WOX13(1)                                             ------------ ->MYB83               --------->ANAC58                                                 -------->P ->MYB46(1)            --------->ANAC46                                               ------>ZmHOX2a(1) ======bZIP_DOF        --------->ANAC58                         ---------->DOF2   <---------ARR11(3) ----ALFIN1  <---------TOE2(3)   --------->ZAT6     ------------------------>ANAC81 <---------ICU4<--   cttgaggcgatttttgatgtttctcaagcaatctaacaatagttcccatgggaagagcgagaaaactaaagagaacatcaacaaaatccttaccagattc  2802700  --------->ANAC58  --------->ANAC58 --TEIL  --------->TOE2(3) ->ARR14(2) --ARR14(2) --GLK1(2)                                                                                          < ---->AGL15                                               <----------DOF2                           < ----->AGL1                                               --------------------->WRI1           ------ ----->AGL2                   --------->YAB1     <----------DOF2                  ----------->GT1   *TSS -------At4g35610   <---------At4g35610          <---------DAG2      --------->ANAC46          ------   agccaagacaaccttgttcttcagttcatctatgagaagtctcacacttagcttttttgactttgtactctcagccattggagattgttaacagagaacg  2802800                                                                                                    -  <------ZmHOX2a(1)                                                             --------->AHL20(2)  < ---------TOE1(3)               ----------->GT1                               <---------ANAC46     <- ---------TOE2(3)          ----------->GT1                               ----------->GT1           -- --->ANAC58        ---------->DOF2                                     <------------CBF            -- --->ANAC58 ------------>CBF  ---------->DOF2                         <------ZmHOX2a(1)<---------ZAT6   ctaaggaagagaagaacaatacaaagagatagtaaagagaaaacgttttgaaagtttaaaccaagagaagaaggattgtgacttaaatagtgtttttaaa  2802900                                                               >>>>>>>>>>GT-3b                                                            <----------ID1                       <---         --------->AHL20(2)                             --------->YAB1                           ----       --------->TOE2(3)                                --------->AHL20(2)                      -----       <----------DOF2                                  <---------AHL20(2)                   --------       --------->TOE1(3)                             --------->YAB1                     <---------AHL20(2) -------->AHL20(2)                                --------->TOE1(3)                    --------->AHL20(2) ---------AHL20(2)                          --------->YAB1  ----------->GT1            <---------AHL20(2) --------AHL20(2)                ---------->DOF2  --------->TOE2(3)                 --------->AHL20(2) ------->AHL20(1)             <---------AHL20(2)  <----------DOF2                  --------->AHL20(2) ------->AHL20(2)      <---------ARR11(3)  <---------YAB1 ---------->DOF2          <---------AHL20(2)   atttaataactttaaatgttatgaagttctattttaaaagaaattttgataactttaataaaaagaaaaataagaaataaacaaaataaataaatgaaag  2803000                                                                                            <--------                                                                                         <---------YAB1                                                                                       --------->YAB1                                                                                       <---------ICU4                                                                                      <---------YAB1                                                                                      --------->ICU4                                                                                    --------->YAB1  --------->AHL20(2)                                                                <--------HAHB4 ------ARR11(3)                         --------->MYB52(2)                         <---------YAB1 ----->ARR11(3)                     --------->ATHB12                             ==================== ---->YAB1 <---------ANAC58 --------->ARR11(3)      --------->GLK1(2)            --------------->AGL15 -->DOF2   <---------ANAC58--------->YAB1  <-----------GT1 ---------->DOF2--------->GLK1(2)<---------AHL20(2)   ataataaactattgctagagagttttctataatcttgttgattagttactccataatcttgtaaagtttatcaaacaatctttctattattattattttg  2803100                                   <-----------GT1                                                 <-                                <---------ICU4                                                <------                                --------->YAB1                                                <------                               --------->ICU4                                                 -------                             <---------ICU4                                               --------->AHL20(2)                            --------->ICU4                                                <---------AHL20(2)                           <---------ANAC55(2)                                           <---------AHL20(2)                       --------->YAB1                                                 <---------AHL20(2)                       -------->HAHB4                                                 --------->AHL20(1)                      <---------YAB1  <---------------AGL15                           --------->AHL20(2)                     <---------TOE2(3)--------------->AGL15                          <---------AHL20(2)                    --------->YAB1<---------YAB1                                     --------->AHL20(2)                  <---------AHL20(2)  <---------DAG2                                <---------AHL20(1)                  --------->AHL20(2)  <----------DOF2                         --------->YAB1  -------                 --------->YAB1<---------YAB1            ----------->GT1 <---------ATHB12--------->AHL20(2) -YAB1     <-----------GT1 --------->ANAC55(2)       ---------->DOF2   --------->WOX13(1)<---------AHL20(1) =====================================================MADS_MADS    --------->YAB1   --------->AHL20(2)   gtagaaaacaatttttctattttaatgatacttattattactttattttgagaataaaagtgtaaaaaatcataaatcaataacaaaataatttaattta  2803200       <---------YAB1     --------->YAB1                                                                               <--     --------->AHL20(2)                                   <---------AHL20(2)                 <------- ----------GT1                                           --------->AHL20(2)                  <------- ---AHL20(1)               ----------->GT1           <---------AHL20(2)--------->YAB1       <-------- ---AHL20(2)       <---------YAB1                   --------->AHL20(2)<---------YAB1        --------- -->AHL20(1)    <---------AHL20(2)            <---------ANAC58  <---------AHL20(2)          <-------- -->AHL20(2)  <----------DOF2                 <---------ANAC58  --------->AHL20(2)  <---------AHL20(2)   ttaacaattataaattcttttattttagttggataaacacaaaaattttcttgattttataaaattttaaatatgataactccaaatttatgaagatttt  2803300  Previous    Next  AGI:  At3g09140.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43240.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43240.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO64803.1); contains InterPro domain Protein of unknown function DUF674 (InterPro:IPR007750) Range:  from: 2800858    to: 2802800    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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