Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <----------DOF2                     --------->ARR11(3)              <---------AtLEC2           ------>ZmHOX2a(2)                                                    <---------ARR11(3)          <---------GLK1(1)                                                     --------->ARR14(2)          --------->GLK1(1)                                                    <---------CCA1(2)         <---------ARR14(2)         ----------->RAV1(1)                   ------->GAMYB         <---------AGP1 <----------DOF2                                  --------->MYB46(3)         --------->ARR14(2)      --------->ANAC58                       --------->At4g35610         <---------ARR11(3)      --------->ANAC58                      --------->MYB52(1)         --------->ARR11(3)    ---------->DOF2             --------------------->WRI1         ------->TEIL<---------ARR11(3)           --------->ANAC58 --------->YAB1                  <- --------At4g35610  <---------GLK1(1)             --------->ANAC46<---------ATHB12      <---------ALFIN1 ------->At4g35610  <---------At4g35610           --------->ANAC58--------->ICU4<---------ARR14(2) --   cttctgcaatggatctccatggagctctttggagaaagcaacatactcttacaagcctcggtcttgaaatcatcaacggccatatctgaaacacttcgac  2798400                     <---------GLK1(1)                    <---------ARR14(2)                 <---------TOE2(2)               --------->TOE1(2)               --------->TOE2(2)                    <---------ATHB12         <-----------GT1  ----------->GT1      --------->ANAC58  --------->GLK1(2) --------->ARR14(2)         --------->ANAC58 <-----------------AGL1       <------- <---------GLK1(2) <------ZmHOX2a(1)    <---------ANAC58        <-----------------AG         -------- --------TOE2(3) <---------TOE1(2)      <---------ANAC58        ----------------->AGL1    ---------->DOF2 --------->ARR10------>ZmHOX2a(1)   <---------At4g35610         <---------ZAT18         ---------->DOF2   taagattcttgtaacatcctaggatttgtggtaacttctgatgcttctccagcaatcttgcaatagtccccattgggaatgtcaagagaccaaagagcac  2798500                ------>MYB83                ------>MYB46(1)      --------->GLK1(2)      <---------ARR14(3)                                                                           <-      --------->ARR14(3)                                                                           <-      <---------ARR11(3)                                                                      <------      --------->ARR11(3)                                              <-----------ARR10<------------- --ZAT18   <---------WRKY18(1)   --------->TOE2(3)               --------->ANAC58      -------------- ->ZAT18<---------ICU4--------->At4g35610  <-----------GT1       --------->ANAC58     ---------------   atcaacaaaatcttgaccagcctcagccaaaacaaccttgttttttttctcatcaacgagaagtttcaagctaatcttctcactcttagccattttaagt  2798600                                                                                          <---------ARR11(3)    ------------------------>ANAC81                                                       --------->ARR11(3) <------ZmHOX2a(1)           --------->ZAT18                                              <---------AHL20(1) --------TOE2(3)      --------->ANAC58         --------->ANAC55(2)                ------->TEIL --------TOE1(3)      --------->ANAC58        <---------TOE2(3)               <---------ARR14(2) ---TOE2(3)       --------->ANAC58            --------->MYB59                 --------->ARR14(2) --AGL15          --------->ANAC58     <---------TOE2(3)                    ----------->ARR10 ->AGL15         --------->DAG2   --------->MYB52(1)                    --------->YAB1    --------->AHL20(1) -->AGL3        ---------->DOF2 --------->At5g28300              ----------->GT1<-------TEIL       <-   taaggaaacgagtaagagaaaagcaaggaagagcagtaactgaggttttaggtatctcggtatgaagatgtgaataagaagatgcgcctctatatattga  2798700              --------->GLK1(2)              ------->TEIL             <---------GLK1(2)           <---------ANAC55(2)           --------->ANAC55(2)        --------->ARR14(2)        <---------ARR14(2)        <---------MYB52(1)                          <---------ICU4                           <-------      <---------MYB46(3)                            --------->YAB1              <-----------GT1   --------->MYB52(1)                              --------->ICU4        <---------ARR11(3)  <-------   ------------>AtMYB77                 --------->At5g28300            --------->ICU4------>MYB83 --------->MYB46(3)                    ----------->GT1               *TSS--------->GLK1(2) <---------YAB1 --------ARR14(2)            <----------DOF2  --------->YAB1         --------->YAB1  ------>MYB46(1)   agaaccagcggttacgaatctcaagagttttctttatcagacagtaaatgagaataatgaaaccacaagagtcataatcttttaaccttccctatgcttg  2798800                                             --------->ANAC46                                       <----------TaMYB80                                    ----------->ARR10                                --------->At4g35610                                --------->ZAT2                     --------->GLK1(2) --------->CCA1(2)                                       <<<<<<               ------>ZmHOX2a(1)<---------ZAT2  --------->AtMYB61                              ------ --ANAC58  --------->ARR14(2)   <---------At4g35610              --------->HSFB2a(2)       <-------MYC3 --ANAC58  <---------ARR14(2) <-----------RAV1(2)     --------->TOE2(3) --------->ANAC46   ------->MYC3   aacttggaatacaaatcctacagaatcaagttccagctgtgatatgcccaccaaaacctttgcgcttcccaaacactgcatgagttttgaacacatgtcc  2798900                                                                         ------->GAMYB                                                                        <---------MYB55(2)       --------->DAG2                                                   <---------MYB111(2)      ---------->DOF2                          <-------TEIL             --------->MYB46(3)  <----------ID1                               --------->ZAT18          <---------MYB52(2) ----------->GT1                           --------->DAG2             ------>NtERF2 <<<<<<<<<<<LFY                <---------GLK1(2)                      ----------->RAV1(1) ----------->AGL1   <----------DOF2       ---------->DOF2 --------->AtLEC2                      -----   caatgggaaaaagcattttcgtctttaagaccagattatttcaaaaaagtgcatcgattaatgcaaaatcgccaacaaacatcgactaatttcaggctta  2799000                                                                                                 ----                                                                                              <------                         <-------TEIL                                                         -------                        --------->ARR14(1)                    <---------AHL20(2)         ------------                        --------->CCA1(2)                    --------->AHL20(2)         <-----------GT1                       <---------ARR14(2)                  --------->YAB1        <---------AHL20(2)          --------->At4g35610                             <---------YAB1        <---------AHL20(1)          <---------At4g35610                            <---------AHL20(2)     --------->AHL20(2) --          --------->GLK1(1)  --------->ARR14(2)          --------->AHL20(2) <---------AHL20(2)------- <---------ANAC58      --------->ARR11(1)    <---------AHL20(2)             <---------YAB1--------->ZAT6 <---------ANAC58      --------->ARR14(2)    --------->AHL20(2) --------->ICU4  <---------AHL20(2) -- ------>ARR10        ----------->ARR10      --------->AHL20(2)<---------ICU4--------->AHL20(2)<------   gatgcttagggcatctccatagtgagatacggtttctcaaaaaaaaaaaaattttgtattttaataaatattagttatataattaatttttaacaataaa  2799100                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                           xxxxxxxxxxxxxxxx>smallRNA(i)                          <------------CBF                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                <---------AHL20(2)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              --------->AHL20(2)        ------------>CBF xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <---------AHL20(2)      >>>>>>>>>>WRKY38 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <---------AHL20(1)      >>>>>>>>>>WRKY43xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)       --------->AHL20(2) ----->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---AHL20(2) <---------AHL20(2)        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <-----------TBP -->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <---------DAG2<---------AHL20(1) >CBF >>>>>>>>>>WRKY26xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------YAB1 <---------AHL20(2) ------->YAB1--------->AHL20(2)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->AHL20(2) -->AHL20(1)<---------ATHB12      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------AHL20(2)           - ------->AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <----------DOF2  <---------YAB1           <- ---AHL20(1)--------->AHL20(2)  <---------YAB1      --------->YAB1--------->AHL20(1)           ------   ataatatttgaccaataaatgatgtacaagtgttcttatgggttctactctctctcatactttttgattatattttatttttatattgaacagttttctc  2799200                     ----------------------->TaNAC69(2)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <xxxxxxxxxxxxxxxxsmallRNA(i)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <------------CBF       --------->TOE1(2)       <xxxxxxxxxxxxxxxxsmallRNA(i)   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxx>smallRNA(l2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                              <--- xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                           <------ xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)           <-----------GT1                        --------->GLK1(1) -------->YAB1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  ------>ZmHOX2a(1)  ------>ZmHOX2a(1) --------ATHB12xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <---------HSFB2a(2)    ------>ZmHOX2a(1)  <--- ------>CBF<xxxxxxxxxxxxxxxxsmallRNA(i) <----------DOF2--------->HSFB2a(2)  ----------->RAV1(2) -----   aatgaaaaaccattgatggagatggtcttagtaactacgactctttatattcaccatctagacaaacaaaaattcctctcctgcatcacatttcctgtta  2799300  Previous    Next  AGI:  At3g09120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64803.1); contains InterPro domain Protein of unknown function DUF674 (InterPro:IPR007750) Range:  from: 2797434    to: 2798769    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version