Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->At5g28300                         --------->ANAC46                       --------->MYB52(1)                  <---------GLK1(2)              <---------ALFIN1                 --------->ANAC58                --------->LBD16                ------->GAMYB                      --------->ANAC55(2)               ------->GAMYB                  --------->ANAC46                    --------->ANAC46 -------At4g35610 <---------ARR14(2)     <---------HSFB2a(2)    <---------TOE2(3) --------->ANAC58 ------>At4g35610 --------->ARR14(2)<---------At4g35610 --------------->AtSPL8   --------->RAP2.6(3) ------>ZAT2  <---------LBD16<-------TEIL--------->HSFB2a(2)    <---------YAB1  --------->MYB52(1)   agcttgctgttcttcaaccggaatctcacggtgcatagagcttccacaacgacacttcatggtactaacattgctgaataacttacggcatgcttcagta  2795600                                                                 ------>NtERF2                                                             ------>ZmHOX2a(2)                                                             =====================================HOX2a_HOX2a                                                            <<<<<<<<<GATA-4                                                            <---------GLK1(1)                                                            <------ZmHOX2a(2)                                      <-----------HVH21     <<<<<<<<<GATA-3                               --------->ATERF1(1)          <<<<<<<<<GATA-1                               <------NtERF2                <<<<<<<<<GATA-2                             <---------DEAR3(1)            --------->ARR11(3)                           <-----------HVH21               <---------AGP1                           -                     <---------ARR11(3)                    <---------ARR11(3)              <------ZmHOX2a(1)                     --------->ARR11(3)   <---------YAB1  <---------CCA1(2)             --------->LBD16                 ---------->DOF2  <---------DEAR3(1)  <----------DOF2            <---------ZAT18    -   gaaacaaaatttgggcagacaaagaacttggtcgcctcggtgtcatcaatgttgagctttagatctctgccatgactccccttcgcactccgaggatgca  2795700                                                                                ------>MYB46(1)                                                                                ------>MYB83                                                                               --------->MYB52(1)                                                                              --------->AtMYB61                                                                              --------->TOE2(2)                                                                              ------->GAMYB                                                                              --------->TOE1(2)                                                                             --------->MYB46(3)   ---                                                                             <---------MYB52(2)  <---                                                                             <---------MYB55(2)  <---                                                                  ----------->GT1<---------MYB55(2)                                                              --------->ICU4--------->ANAC58     ----       <---------ANAC58                <-------TEIL   <----------DOF2       --------->ANAC46   ------       <---------ANAC58         <---------YAB1     <---------ALFIN1       --------->MYB46(3)  <------     --------->ICU4          --------->ICU4      ----------->RAV1(1)<---------ANAC46         <------- -------->ANAC58        --------->ANAC58    --------->RAP2.6(3) <---------GLK1(2)--------->MYB46(3) -------->ANAC58        --------->ANAC58   --------->ARR14(2) <---------YAB1--------->ANAC58 <-------   gcaagaaatgcttacaagcttgagactcgaaattatcaacgtccatgtctgcaacacttttgtaaagattgtgtaaacaaccaacgactgaagactgcgg  2795800      <---------ANAC58      <---------ANAC58  <---------At4g35610 <---------YAB1 ------>GLK1(2)       <<<<<<<GRF7 ------GLK1(2)      ----------->HVH21                                             --------->ZAT2 ------ARR14(2)   ----------->RAV1(2)                                             <---------At4g35610 ----->ARR14(2)  -------->P--------->YAB1                  <---------ZAT14        --------->At4g35610 --->LBD16   --------->ANAC58                         --------->ZAT14             <---------ZAT2 ---ANAC46<---------HSFB2a(2)                         <---------ZAT14   <---------ARR11(3) --At4g35610 --------->ANAC58             ----------->GT1  --------->ZAT14       <---------TOE1(2) --LBD16  --------->HSFB2a(2)         <------ZmHOX2a(1)    <---------ZAT18  ------>ZmHOX2a(1)   <----   attctgatgcttctcgagcaacctgacaatggtacccataggaagagtcaaaagactacagagcacatcaacaaaatccttcccagcttcagccaaaata  2795900                                                                                                   --                    --------->YAB1                    <---------ARR11(3)                           <-                 --------->WOX13(1)                   --------->ARR11(3)              <---------ATHB12               <---------YAB1                     ---------->DOF2               <-----------HVH21 ---        <-----------GT1                         <---------HSFB2a(2)      <-----------RAV1(2)     ----      <-----------GT1                           --------->HSFB2a(2)   --------->RVE1(1) ---------->DOF2 -------GT1 ------>ZmHOX2a(1)               <---------GLK1(2)    --------->YAB1----------->GT1  *TSS   actctgtttttctcctcatcaatgagaagtcttaggctaaacttcggcttctcaaagctcttagccatcaaaatatcaggggggtcaaatcaaagaagaa  2796000                                                                                     --------->ANAC46                                                                              --------->ALFIN1                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)          --------->At4g35610                                       ----------->TBP --------->LBD16    <---------AHL20(2)                                 <----------DOF2      --------->O2 ------->ARR11(3)                                      <---------GLK1(1)    <---------O2 --------ARR11(3)     ---------->DOF2                 <---------ANAC58      --------->ANAC55(2) ------>YAB1       <---------HSFB2a(2)                <---------ANAC58      <---------ANAC58   <----- ------->GT1       --------->HSFB2a(2)      ----------->GT1 <---------ALFIN1<---------ANAC58   ------   agataatttatgagcagtgttttagaaaggagtttttgtcagtaaatggaaacaaggctttcccacccatataaatagacgtgttccacagaacataatg  2796100                <-------TEIL      --------->TOE2(3)                     <---------ANAC58      --------->YAB1                    <----------DOF2      --------->TOE1(3)                --------->TOE2(3)     <---------YAB1              --------->ANAC58   <-----------GT1               --------->ANAC46 ----YAB1      --------->CCA1(2) --------->ANAC58                                            -------- --->ICU4 ---------->DOF2--------->ANAC46   <---------ANAC58             <-------TEIL  ---------->DOF2   tttagttaccataaaagattcaaatacccaaaaccaagaaacctttgagtgtccctatgagcgcatgagtttggattcatgtcccaagggaaagagtgta  2796200                                          ------>MYB46(1)                                          ------>MYB83                                     <---------ALFIN1                                    --------->DEAR3(1)                                    --------->MYB46(3)                                   <------NtERF2                                   --------->ATERF1(1)                                  <---------ATERF1(1)                                  ------>NtERF2                                 --------->RAP2.6(2)                                 --------->DEAR3(1)                                 --------->RAP2.3(3)                                --------->DEAR4(2)                                --------->ATERF1(1)                                --------->RAP2.3(1)                                --------->ERF1                                --------->MYB46(3)                                --------->DEAR3(2)        --------->AHL20(2)     <---------ATERF1(1) --------->YAB1       --------->YAB1  ---------->DOF2   <---------CCA1(2) --------->ANAC58                   -------    --------->TOE2(3) --------->AHL20(2)<---------MYB111(2)--------->ANAC58                --------->ANAC58 <-----------GT1 <---------ATHB12--------->RAP2.3(2)       --------->ANAC46 --------->ZAT18--------->ANAC58 --->GT1<---------AHL20(2)     --------->ZAT2   ----------->GT1      <----------DOF2---------->DOF2   tattttccataaaaatgcaatcgattaaagacgagccgcccacctatctccagtaataaacaagacagtagctataagggcattgagaaagaaacgcctt  2796300                                                                                   ----------->GT1                                                                         <---------AHL20(2)                                                                    --------->AHL20(2)   ------------                                                                 --------->YAB1---------->DOF2                                                          <---------MYB46(3)  --------->AHL20(2)                                                       --------->MYB52(2)--------->AHL20(2)      <---        <---------At4g35610           <---------At4g35610 ----------->GT1--------->AHL20(1) <--------     <-------TEIL         ---------->DOF2          <------ZmHOX2a(1)<---------AHL20(2)   <----------- -->TOE2(3)  --------->CCA1(2) --------->ZAT18   <---------TOE2(3)  --------->AHL20(1)<-----------GT1   aatgagtttcatcagatttaggggtctgcaaagtcgactgagctacttcttgaggattagttgttaaaaataaaataaaataaaagagttacttctttag  2796400                                                  <---------ARR11(3)    ----------->RAV1(2)                                            <---------TOE2(3)      --------->MYB52(1)                       >>>>>>>>>GT-1        --------->ANAC58     <---------MYB52(2)     <----------DOF2----------->GT1         --------->ANAC58  --------->ZAT14----------->RAV1(1) --->AGL15     --------->ZAT14 --------->ARR11(3) --------->ARR11(3)    =================RAV ---ZmHOX2a(1) <---------ZAT14 <---------ARR11(3)--------->At4g35610  ------->GAMYB   <-------TEIL --DOF2        --------->ZAT18 <---------GLK1(2) <---------At4g35610 --------->MYB46(3)      -------- ----AGL15    <<<<<<<<<<<<<<<<<LFY       <---------ATHB12    <---------MYB52(1)--------->MYB46(3)   >   gatttttctttagagagaacactggttaatacagatttttgtaatcaaggaagctctctctcagttaactaacagcctgcaacaacgatacattcgaaag  2796500  Previous    Next  AGI:  At3g09110.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64803.1); contains InterPro domain Protein of unknown function DUF674 (InterPro:IPR007750) Range:  from: 2794170    to: 2795996    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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