Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->ARR14(2)                                         <---------ARR14(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                 --------->ANAC58                          <---------TOE2(1)                          <---------ANAC46          <---------ATHB12                       <---------SPL7   <---------CCA1(2)         <---------ICU4                     ----------------->AGL1        --------->ANAC58                            <-----                 ---------->DOF2 --------->ANAC58  --------->ANAC58                            <-----            --------->MYB52(1) ---------->DOF2    --------->WOX13(1)<---------YAB1             ------            ------>MYB46(1)   <------ZmHOX2a(1)--------->ANAC58   --------->YAB1               <----- ------>DOF2------>MYB83  <---------TOE1(1)    --------->ANAC58  --------->ICU4     <------ZmHOX2a(2)   aaatcggagaaaccaaacagaaagccttacgaggaaagaaacatatctccagcaatcaatggtatgaattatgaaacaaaaattcgatcaaattgaggcg  2787400                                          <---------At4g35610                                          --------->ZAT2                                          <---------ZAT2  <----------DOF2  <---------At4g35610              <--------P             <---------DAG2                           <-  --------->At4g35610         <---------LBD16            <---------ANAC58                       <---- ------->TEIL               <---------ARR14(2)           <---------ANAC58                      ------ ----ANAC58                 --------->ARR14(2)          <------NtERF2                          ------ ----DEAR3(1)               --------->MYB52(1)     <---------DEAR3(1)                       --------- --->ALFIN1              --------->ANAC55(2)  <-----------HVH21                          <------ZmHOX2a(1) ----ANAC58   <------ZmHOX2a(2)    --------->ATERF1(1) ------>NtERF2           <-----------GT1<------   ttgcatctcaatacagatcgaaaacttacatatcggggtagcccagctcgtcatcggtggctttacgctctctgaacttattttctccataggagagatt  2787500     ---------->DOF2    <------ZmHOX2a(1)  <---------TOE1(3)  <---------TOE2(3)                                                                             <---- --------MYB52(1)         <---------At4g35610                                                   ----- ---TEIL                  --------->ZAT2                                          --------->ARR14(2) --->ARR14(1)             <---------ZAT2                --------->YAB1            <---------ARR14(2) --->GLK1(2)              --------->At4g35610          <---------YAB1            <----------TaMYB80 - -->ARR10                ----------->RAV1(1)    --------->GLK1(1)      --------->ARR14(2)      ------ ---GLK1(2)        <---------MYB52(2)          <---------ARR11(3)      <---------ARR14(2)----------->HVH21   cgttaaggaaagacagagcaaacaaaccagcagacactgcctcgctcgagatttcatatgatcacactctgcgaatactaggcaaattcccttgacataa  2787600                                                              --------->LBD16                                                            ------>MYB46(1)           --------->YAB1                                   ------>MYB83 --------->AHL20(2)         --------->ARR14(2)         <-----------GT1 <---------AHL20(2)         ------->TEIL          ----------->GT1         <----------DOF2 -----AHL20(2)        --------->ARR14(2)      <---------ARR11(3)     <---------LBD16 ---->AHL20(2) --------->GLK1(2)              <---------GLK1(2)    --------->GLK1(2) -------->AHL20(2)    <---------ARR14(2)      --------->ARR11(3) ---------->DOF2           ---------- --->AHL20(2) <---------GLK1(2)         --------->ETT(2)  --------->AtMYB61       <---------ARR14(2)-   aattaaaatcgaatcagaatcgaagaactgtatccaactacgtcgatagattttgtaaaacctccccaaaatcggggtttagggaatttggaatggtgaa  2787700                                                                  --------->RAP2.3(1)                                                                 ------>NtERF2                                                                 --------->LBD16                                                                 <---------ATERF1(1)                                                                <---------ATERF1(2)                                                                <---------DEAR3(1)                                                                --------->DEAR3(1)                                                               --------->ATERF1(1)                                                               --------->DEAR3(2)                                                              --------->ZAT2                                                              <---------ATERF1(1)                                                              ------>NtERF2                                                              --------->At4g35610                                                              <---------ZAT2                       <-                                                              <---------At4g35610            --------                                --------->ZAT2               --------->DEAR3(1)              <-------                                <---------ZAT2            ------>ZmHOX2a(2)               -----------                         <----------ID1           --------->ALFIN1<------NtERF2       --------->REM1(2)            --------->HSFB2a(2) --------->At4g35610    --------->GLK1(1)              --------->ZAT14            <---------HSFB2a(2) <---------At4g35610    <---------GLK1(1)              <---------ZAT14          ===============HOX2a_HOX2a            --------->ALFIN1--------->ATERF1(2)  ----------->HVH21 ->GT1    <------ZmHOX2a(2)    ------->TEIL     <-----------RAV1(1)          ----------->TGA1-------- --------->DOF2   <------ZmHOX2a(1)    --------->GLK1(2) <------ZmHOX2a(2)   ----------->HVH21     <-   taaaaaggagagatcgagaaggagaatgagacgaagctgagactctgtgtgtgtgggagatcgcagccggcgaaatcgaatgacgctgtgaagagtaaac  2787800                                                                      --------->ATHB51                                                                      <---------ICU4                                                                      -------->ATHB1                                  <---------At4g35610                --------->ICU4                                  --------->At4g35610                <---------ATHB12                           --------->ANAC58                          <---------ATHB51      <---------MYB52(1)   --------->ANAC46                        --------->WOX13(1)   ---------->ID1          --------->ANAC58                      ------------>CBF --------ANAC58            ----------->HVH21                    --------->TOE2(3) ->ZAT18               --------->ANAC58                        --------->ANAC58              ------>ZmHOX2a(2) --ZAT14               --------->ANAC58                        ----------->GT1            --------->ATHB12 >GT1<---------RAP2.6(3)--------->TOE1(2)    ----------->GT1   --------->ANAC58 --------->ZAT6 ->ZAT14 *TSS------>ZmHOX2a(2)    <---------ZAT2   --------------->AGL15      <-----------HVH21     - --------ANAC58    ---------->DOF2--------->ZAT2   <---------------AGL15<-----------GT1 <---------KAN4(2)   tgcttgccgttttgatctaagtaaaacgcacgacacagctcgctgtttagttacaaatatgagaaacgtcaattattccctatcacttcgaatgatcgaa  2787900                 <---------ANAC58            <----------DOF2                                           <---------WOX13(1)           <---------DAG2                                           -------->HAHB4        <-----------GT1                                             --------->ATHB12            -----       <-----------GT1                                             --------->ICU4              ------   <---------RVE1(1)                                               <---------YAB1       --------->ARR14(2)  --------->ARR11(3)                                          --------->YAB1            --------->GLK1(2)  <---------ARR11(3)         <-----------GT1                 <---------ATHB12           <---------ARR14(2)  <---------GLK1(2)<---------MYB52(1)                <---------ARR11(3)          --------->CCA1(2) ---------->ARR10<---------ANAC58                    --------->ARR11(3)       <---------YAB1   <-----   ggaagatttttaaccttttccgttcttgatttttctatgtaaaatgcgatgaaaagatttcaaatcaaaatgattgacatatgatatgagaatcggagtg  2788000                                                                    --------->YAB1                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                                 --------->YAB1                                                            ------>MYB83<---------YAB1                                                            ------>MYB46(1)                 ---------->DOF2                           ----------->RAV1(1)    <----------DOF2                            --------->YAB1 --------->YAB1 ------>GT1    <---------YAB1         <---------ANAC58   --------->DEAR3(2) --->ALFIN1  --------->YAB1           <---------ANAC58   --------->MYB46(3)           ---------->DOF2 ----AtMYB61<---------ATHB12     <----------DOF2 <---------YAB1 <---------ATHB51 --------->ZAT6   gtgatactttctcaatgataaaagtgtctaacattcttttgcttctgaagtataatggaaccaacaataataatatgatactaatactaaaagattacaa  2788100               <---------ANAC58               <---------ANAC58               --------->TOE1(2)                               <------         <---------YAB1                       --------->TOE2(2)                               -------   ------>ZmHOX2a(1)                 --------->REM1(1)   --------------->AGL15    --------->ANAC58  --------->TOE2(3)            <---------ALFIN1     ------->TEIL----------->GT1   --------->ANAC58   cattcctaagtactattgctagtaatattacaaacaccttcatctaaacatatgaatcacttagaagagtaaacacatcttatcaagctaaaaccatcat  2788200                   <---------YAB1   ------>MYB83           --------->ANAC58         ------>MYB46(1)           --------->GLK1(2)           --------->ANAC46       --------->MYB46(3)         <---------ARR14(2)       <---------ALFIN1   <---------YAB1                     --------->ARR14(2)      --------->LBD16   --------->YAB1                       <---------GLK1(2)             <---------     --------->ANAC46  <-------TEIL<---------ALFIN1       --------->LBD16  <---------HSFB2a(2) ---ICU4   --------->ANAC58    <-----------GT1           <---------LBD16   <---------HSFC1(1)      -- -->YAB1 --------->MYB52(1)--------->YAB1               <---------LBD16    --------->HSFB2a(2)    <--   cacatacccccaaacggaattttgattcataataaacccaccctaaaacctccttgaaaccgggattcttacacattcgagaaatgcagcgttctttttt  2788300  Previous    Next  AGI:  At3g09090.1    Description:  DEX1 (DEFECTIVE IN EXINE FORMATION 1). similar to hypothetical protein OsI_013639 [Oryza sativa (indica cultivar-group)] (GB:EAY92406.1); similar to hypothetical protein OsJ_012610 [Oryza sativa (japonica cultivar-group)] (GB:EAZ29127.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15777.1); contains InterPro domain FG-GAP (InterPro:IPR013517) Range:  from: 2782703    to: 2787809    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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