Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <------NtERF2                                                            ------>NtERF2                                                            <-----------HVH21                                                           <---------ANAC46                                                          <------NtERF2                                                         <---------RAP2.3(1)                                                         <---------ATERF1(1)                 --------                                                        <---------DEAR3(1)           <---------WOX13(1)    --------->LBD16                                    --------->RAP2.6(3)         --------->ATHB12   --------->LBD16                                     <---------ORA47(1)         <---------YAB1  ---   <---------LBD16        ---------->DOF2              --------->SPL7           --------->ANAC55(2) -  <---------LBD16       <-------TEIL                 ----------->HVH21          <---------ANAC55(2)<- <---------LBD16      <---------SPL7               <------NtERF2            --------->GLK1(1)<------- ------->ARR14(2)    <---------ANAC46       <---------ICU4--------->RAP2.3(1)  <-------TEIL  -------- --------ARR14(2)   <-----------------------TaNAC69(2)<------ZmHOX2a(1)<---------LBD16       <-------   aaatccggggaataactcaaacgacgtacaaaggagaaagaatcaaacatggccgaggacggcgtcaagagaactcggaaatacatgattgagactgcag  2764300                            <<<<<<<ZML2                       --------->ZAT2                       <---------ZAT2      ---------->DOF2<------NtERF2 ->ZAT14            --------->LBD16 ------>SPL7 --------->HSFB2a(1) ---------->RAV1(1)--------->ETT(1)                                              --------->MYB52(1) --------ETT(1)   <---------LBD16                                              <---------MYB52(2) --ZAT18     --------->HSFC1(2)                                              --------->MYB52(1)    -- ->ZAT18     <---------HSFB2a(1)              ------>ZmHOX2a(1)     --------->DAG2         <------NtERF2 --ZAT14     <---------HSFC1(2)       ------------>CBF             ---------->DOF2       <---------DEAR3(1)   tccgacaaaaaaggaaccttgccggagctagaacagaggtctcaattcctctataaaccatgagaaacaaaaagcatccaaacgaacagggtcgtcgtga  2764400                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                           <------NtERF2                                                                                          --------->LBD16                                                                                          ------>NtERF2                                                                                          --------->MYB52(1)                                           ----------->GT1                          ---------->DOF2                                         <---------At4g35610                     --------->ANAC58                                         --------->At4g35610                 <---------WRKY18(1)-----                                         <---------LBD16                    --------->WRKY38(1)<-----                                   <---------DAG2                           --------->WRKY45 <-------                                   <----------DOF2                          --------->WRKY12<--------                                <-----------GT1                        <---------ANAC46  --------->ANAC46                          <---------AHL20(2)                       <----------DOF2--------->LBD16  --             --------->GLK1(2)--------->YAB1                    -------->P <--------P   --------->MYB46(3)            --------->DAG2--------->AHL20(2)                    ------->TEIL----------->HVH21<-------           ---------->DOF2--------->AHL20(1)    --------->AHL20(2)<---------DAG2 --------->ANAC58<--- -------->DOF2           --------->AHL20(2)--------->LBD16     <-----------GT1   <---------ANAC55(2)   gtaaagaaattcgaaaagctgtttcaaaaaaattatactttttagcggaaaaaaatgagaagaatcaaccttttcgggttgacccgtaaacccgccggtt  2764500   <---------LBD16 ---->MYB111(2) -----MYB46(3) ---->MYB52(2) ---P -GAMYB ---MYB52(1) ---->MYB55(2)           <---------ZAT6                      <---------ICU4 ----MYB55(1)            <---------ANAC46                   --------->ICU4 --DEAR3(2)              ----------->GT1                  --------->ANAC55(1) -DEAR3(1)             <---------ANAC46                   --------->ANAC46 ------->WRKY38(1) <---------TOE2(2)                      <---------ANAC55(2)            <---------ANAC46 --MYB46(3)        <---------TOE1(2)                      --------->ANAC55(2)      --------->ICU4 ----GAMYB  <------ZmHOX2a(1)                      <-----------GT1     <-------TEIL<---------ATHB51   gttgactcggattaggactcgtatgtagtgtgaattagaggttctctggtcatttacaacacataattagaggttcgatgaagaaattattctgtgtaag  2764600                                                        *TSS       --------->ALFIN1                                                      ---------->DOF2                         <------                      ---------->DOF2             <---------AHL20(2)                       --------->ICU4     --------->AHL20(2)                           --------->AHL20(2)                 <---------TOE2(3)     <---------AHL20(2)  --------->At4g35610 ------------>CBF <---------AHL20(2) <----------DOF2   tgtgaatttaaatatagcaaacctataagctcaaaactttgaatatggccaatttataaagaaatttatgtgtggaagtatgactttaatgtaattaaga  2764700                   --------->YAB1                   <---------ICU4                  --------->ICU4                 <---------AHL20(2)                  <----------DOF2                           <-----                --------->YAB1                       --------->TOE2(3)                         ------               <---------YAB1                    --------->ARR14(2)                <---------ANAC58          --------->GLK1(2)                      <---------ARR14(2)                <---------ANAC55(2)         --------->WOX13(1)                 --------->AtLEC2                       <---------ANAC46 ---TOE2(3)<---------ATHB12            <----------DOF2                             <---------ANAC58   aatattagagccaatctataataatgtctcaaatatagggtcttttatgcaaatactttaaaactcaaaactggttttggataatgcgtaaactaaatta  2764800            <-------GAMYB           <------MYB83           <------MYB46(1)           ----------->GT1          <---------MYB46(3)                                                                        -         --------->ALFIN1                                                                           -       <---------O2                  <<<<<<<<<TBF1                                                  -      <---------AtMYB61           <<<<<<<<<TBF1                                  ------->TEIL-------- ----AHL20(2)               --------->HSFB2a(1)                               --------->AtLEC2    --- --->AHL20(2)              ------->TEIL    <---------------------WRI1    --------->ANAC46    --------   aaaaacgagaggtgggttactctgaaacgagccttcttcttcttcgttgaagaaaacatagaagatgatgaacacacttcatgcatttcagacaacctta  2764900                                                                                   <---------ARR14(2)      <----------DOF2                                                              --------->ARR14(2)   ------>MYB83                                                                 --------->ANAC55(1)   ------>MYB46(1)                                                              --------->ANAC55(2) --------->AtMYB61                                                              --------->ANAC58 <---------MYB111(2)                                                            --------->ANAC46 <---------MYB46(2)                           <---------ALFIN1                  --------->ANAC58 <--- -------->ANAC46                              ------>NtERF2                     <---------ANAC55(2) -------->ANAC58                             <---------ETT(1)            <---------LBD16       <----- -------->ANAC58                             --------->ANAC46          <---------ARR14(2)   --------- ->TOE1(3)                                  --------->HSFB2a(2)        --------->ARR14(2)  <---------ARR14(2) ------>ZAT6                                <---------HSFB2a(2)    ----------------->AG    --------->ARR14(2) ->TOE2(3)      <----------DOF2         <----------DOF2            ----------------->AGL1  <---------GLK1(2)   acaccaaactttcatgttcttttcaatgcctcgagacattctctttcccgaccccaatttctctgtctctccaaatcgggagacggaacttcagattctg  2765000                                                                                                 <---                                                                                            <--------                                                                                          -----------                                             <---------ARR11(3)   <---------ATHB12      <---------MYB52(1)        ------>NtERF2                      --------->ANAC58       --------->ICU4     <-------TEIL----        <---------ALFIN1                   --------->ANAC58       <---------YAB1   --------->ARR14(2)       <---------ETT(1)                --------->ANAC58      ------>ZmHOX2a(2)     <---------ARR14(2)     ------>ZmHOX2a(2)                 --------->ANAC58      --------->ANAC58     --------->HSFB2a(1) <---------YAB1                    --------->ANAC46          --------->ANAC58     <---------HSFC1(2)< ------GLK1(2)                --------->ARR14(2)           <---------ARR14(2)     <---------HSFB2a(1) ----YAB1                     <---------ARR14(2)           --------->ARR14(2)     --------->HSFC1(2)< >GLK1(2)--------->ARR14(2)<---------------------WRI1     <------ZmHOX2a(1)      <---------TOE1(2)  <   attctgatcccgaccctccaaaacccgaaggcgatactcgcaggcaagaactcttagctaggatcgccatgattcagacatcgaaggtccgtttgacgga  2765100                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                    <-----------ARR10                                       ------>NtERF2 ------GLK1(1)      --------->ARR11(3)                                     --------->ANAC58 -LBD16      <------ZmHOX2a(2)    <---------At4g35610                      --------->ANAC46 >HVH21    <---------GLK1(1)      --------->At4g35610                      --------->ANAC58 ----->GLK1(1)      <---------ARR11(3)             --------->LBD16  <---------HSFB2a(2) ---------ANAC46    --------->ARR14(2)           <---------LBD16   <------MYB46(1)---------->DOF2 ---------ANAC58    <---------ARR14(2)    --------->ANAC58         <------MYB83 --------->AtLEC2 ---- ---------ANAC58    --------->GLK1(2)     --------->ANAC58       <--------P--------->RAP2.6(2)  -----   tttcttggacgagagatcagagtatctcaccaagtttgctgaagaagccaatgcggagtttgacaaggttggagaagacgccatgaaagaccttgacgaa  2765200  Previous    Next  AGI:  At3g09040.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G13650.1); similar to hypothetical protein OsJ_014817 [Oryza sativa (japonica cultivar-group)] (GB:EAZ31334.1); similar to hypothetical protein OsI_016072 [Oryza sativa (indica cultivar-group)] (GB:EAY94839.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60884.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 2761200    to: 2764286    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g09050.1    Description:  similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96465.1) Range:  from: 2764656    to: 2766149    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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