Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ----------->GT1                 <---------TOE2(3)             <---------TOE1(2)                 --------->ANAC58                  ---------->DOF2  <--            ------>ZmHOX2a(1)                  --------->ANAC58                <-------TEIL       <-- ---------ICU4      <-----------GT1   <---------TOE2(3) <---------TOE1(3)     --------->CCA1(2)------ -----GT1 ----------->RAV1(2)     <-------GAMYB--------->GLK1(2)      <---------------------WRI1<<<<<   catcttgacacctcctgcgttttatccagtgaattgggttgagattgagaagctattcaaggttccaagaacagagaaagattcaaagagagttcaagtc  2754400                                                                          --------->ANAC46  <-------TEIL                                            --------->HSFB2a(1) --------->ARR11(3)                                       --------->HSFC1(2) -------TOE2(3)      --------->ANAC58                     <---------HSFB2a(1) -------TOE1(3)      --------->GLK1(2)              --------->At4g35610   --------->ANAC58 --->WRKY18(1)       --------->ANAC58               <---------At4g35610   --------->ANAC58 <<<<WRKY18   <---------At4g35610     <---------LBD16     <---------HSFC1(2)       <---------ANAC46   aaggttcttgaaatgcagaagagaagctatggattgcatttgtggaataagtttagcagaaaattcgaaattgaacaaggaagtgccatggataaattgg  2754500                               --------->ARR14(2)                               <---------ARR14(2)                                            <-------                               ------->TEIL                                                ----------                          --------->ZAT14                                           ----------->GT1                   ----------->HVH21                                              <---------ANAC46            <---------AHL20(2)<---------CCA1(2)   <----------DOF2                 <---------ANAC58         <<<<<<<<<EIN3    <---------ZAT14    <----------DOF2       >>>>>>>>>>>>>>>>>LFY    --------->YAB1    <---------ATHB12    >>>>>>>>>TAC1  --------->YAB1 <-----------GT1             <---------ANAC58 <-   tttcaaatcaatgtataatttgtgacagtgttgtatctgtatcatgacttttcttttttcattttgtaattccattgtagaatagcttgtaaattgtaat  2754600                                                                                           <---------                                                                                  <------MYB83                                                                                  <---------MYB46(3)                                                                                  <------MYB46(1)                                                                                  <---------HSFC1(2)                                                                                  <---------HSFB2a(1)                                                <---------AHL20(2)                --------->HSFB2a(1)                                                --------->AHL20(2)             <------ZmHOX2a(1) <--- --YAB1                             <---------AHL20(2)                      --------->YAB1<---------ANAC58 ->GT1                      <----------DOF2<---------YAB1        ---------->DOF2  --------->HSFC1(2) --------TOE2(3)    <-----------GT1--------->AHL20(2) --------->WOX13(1) ------>ZmHOX2a(1)<---------ANAC58   taacaatgaaaccctcagtttttttcatttctttcaatttaaaccctgattaaaatcaatctctctataaagctcctatcaggatggttctggcttttta  2754700                  ------>ZmHOX2a(1)                                   <---------ANAC55(2)          <---------ICU4                                              <---------ANAC55(1)          --------->YAB1                                              --------->ANAC55(2)         <---------YAB1                                         <---------YAB1         --------->ICU4                                        ------------>CBF    --------->ANAC46    <---------At4g35610                             --------->ANAC58  <---------ANAC58 *TSS -DOF2----------->GT1             --------->ANAC58  --------->ANAC58  <---------ANAC58--------->DEAR3(1) ------YAB1  --------->YAB1       --------->ANAC58  --------->bZIP60(2)      <<<<<<<<<TBF1   tgtttgggctgataattatcctatagagattagcacaggcccatataagttgacaagtcatcagttacaattacgtttcttcttcacacagcccaattag  2754800                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                           ----------                                                                                        <------NtERF2                                                                                        --------->ATERF1(1)                                                                                       <---------RAP2.3(1)                                                                                       <---------DEAR4(2)                                                                                       <---------ATERF1(1)                                                                                       <---------ERF1                                                                                       ------>NtERF2                                                                                      <---------DEAR3(1)                                                                                      --------->ATERF1(2)                                                                                      <---------RAP2.3(3)                                                                                      <---------ATERF1(2)                                                                                      --------->DEAR3(1)                                                                                      <---------RAP2.3(2)                                                                                     <------NtERF2                                                                                     --------->ATERF1(1)                                                                                     <---------ABI4(1)                                                                                     <---------At4g35610                                                                                     --------->At4g35610                                                             <------NtERF2          <---------ERF1                                                            ------>NtERF2           ------>NtERF2                                                           <---------DEAR3(1)       <---------ORA47(2)                                                           <----------ID1           <---------ATERF1(1)                                                           <---------ATERF1(2)      <---------RRTF1(1)                                                           --------->ATERF1(2)      <---------RAP2.3(1)                                                           <---------ANAC46         <---------DEAR3(2)                                                           <---------RAP2.6(2)     <---------RAP2.3(3)                                                          --------->RAP2.6(3)      <---------DREB2C(2)                                                        <---------DEAR3(1)         <---------DEAR3(1)                                                    ----------------->AGL1         <---------At1g77200                                                    <-----------------AGL1<---------At4g35610--------             --------->At4g35610               <---------MYB46(3)         --------->At4g35610--------             <---------At4g35610           <---------AtMYB61--------->RAP2.6(2)  <-----------HVH21   caaaaactcggttcaagctgaaatcgaaactcgaaccggactgtgatggtggtttccgatggcggcaaacgagtgaagctcaacgtcggcggcgagatct  2754900      ------>MYB46(1)      ------>MYB83     --------->MYB52(1)    --------->AtMYB61   --------->MYB46(3)   <---------MYB52(2)  <--------------OsCBT <---------ATHB12 >ZmHOX2a(2)         --------->WOX13(1) --ARR14(2)        <---------ATHB12                 <----------DOF2                <---------LBD16 --ARR14(3) --------->DEAR3(1)                    <---------At4g35610            --------->GLK1(2) ->ARR14(2) <---------ETT(2)                      --------->ZAT2              ------>ZmHOX2a(2)   --- ->ARR14(3) --------->ETT(2)                      --------->At4g35610------>MYB46(1)              --- --ARR11(3) --------->WRKY12                      <---------ZAT2     ------>MYB83--------->ARR14(2) ->ARR10    --------->WRKY38(1)               --------->ANAC46     ------->GAMYB <---------ARR14(2) ->ARR11(3)<------NtERF2--------->YAB1       ------>ZmHOX2a(1)     --------->AtMYB61  <---------MYB52(1) ->AGP1   <-----------HVH21         <---------GLK1(2)             --------->MYB46(3) --------->LBD16-   tcgaaaccaacgcgtcgaccattcaatcatcttgcccagactctctcctcgcagctctatcgacttcaacctcccatggatcgaatccggttttcatcga  2755000                    <---------MYB52(1)                    <------NtERF2                   <-----------HVH21                   <-----------TGA1                   ------>NtERF2          <---------GLK1(2)          <---------ARR11(3)          --------->ARR14(2)          <---------ARR14(2)                   <---------ATERF1(1)  <---------------------WRI1          --------->ARR11(3)                  --------->ETT(2)     --------->LBD16        ----------->ARR10             --------->ZAT14              ------>NtERF2--------->ANAC46      --------->LBD16    --------->TOE2(3)    <---------WRKY38(1)<---------LBD16--------->ANAC58    --------------------->WRI1     ------>ZmHOX2a(1)   --------->At4g35610      --------->AtLEC2    <---------LBD16<---------RAP2.6(3)<---------ZAT14  --------->ZAT2           --------->ANAC58 ------>YAB1      --------->ANAC46------------------>SPL14      ------>ZmHOX2a(1) --->ZmHOX2a(2)   --------->RAP2.3(3) <---------SPL1(2)<---------At4g35610 <-----------GT1  <-------- ---------->HVH21 --------->DEAR3(1)  <---------SPL7   <---------ZAT2<---------ANAC46 <---------ARR11(3)   tcgtgacccggagattttcgccgtcattctcaatctcctccgtactggtcgactcccagctaattcctccggcgttttttccaagcaagagctactagat  2755100                                                            <------MYB83                                                        --------->ZAT2                                                        <---------ZAT2                                                     --------->At4g35610                                                     <---------At4g35610                                                     ------>NtERF2                                                    <---------DEAR3(1)                                                    --------->DEAR3(1)                                                    --------->RAP2.3(2)                                                   --------->RAP2.3(1)                                                   --------->DEAR4(2)                                                   <------NtERF2                                                  <---------RAP2.3(1)                                                  ------>NtERF2                                                 <---------ALFIN1                                                 --------->ANAC46                                                 --------->RAP2.6(2)                                                 --------->RRTF1(3)                                                 --------->DEAR3(1)                                                 <---------DEAR3(1)                                                 <---------ATERF1(2)                                                 --------->ATERF1(2)                                                 --------->RRTF1(2)                                                 --------->RAP2.3(3)                                                --------->DEAR4(2)                                                --------->ORA47(2)                                                --------->RRTF1(1)                                                --------->ERF1                                                --------->RAP2.6(1)                                                --------->RAP2.3(1)                                --                                                --------->ATERF1(1)                                <-                                               ------>NtERF2<------MYB46(1)                       <--                     <---------ATHB12          <---------ATERF1(1)                            <------                <------NtERF2                  --------->ABI4(1)                              -------               <-----------HVH21              --------->ANAC46                               --------               ------>NtERF2                  --------->DEAR3(1)                             --------              <---------DEAR3(1)             --------->MYB46(3)                             ---------              <---------ANAC46              <---------At5g28300                             ---------            <---------RAP2.3(1)            <-----------GT1 <---------TOE1(2)              <---------SPL7           <---------RAP2.6(2)   <---------WOX13(1)--------->ATERF1(1)         ---------->ARF1<------          <---------LBD16       --------->ARR14(2)<---------ATERF1(1)   <---------CCA1(2)--------->YAB1          <---------At5g28300   <---------ARR14(2)--------->ABI4(1)   <---------ANAC58  <<<<<<<<<ARR2         <-----------GT1    ------>ZmHOX2a(1)--------->DEAR3(2)       <---------ANAC58  <<<<<<<<<ARR1 -------AGL15 --------->DEAR3(1)<---------GLK1(2)--------->RAP2.3(2) <-------TEIL  --------->ANAC46<-   gaggctatgtattacggcgtcgaatcactcctcagattggcgatgttaccgccgccgctgctaggtttcgatgcgtctcttgtctccacaatcgtaccgg  2755200                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                        --------->GLK1(1)                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                                                       --------->ARR14(3)                                                                       --------->AGP1                                                                       <---------AGP1                                                                       <-----------ARR10 ------->At4g35610                                                    <---------CCA1(2) --------ZAT2                           --------->ANAC58              --------->At4g35610 -------MYB46(3)                <---------At4g35610                   <---------At4g35610 ---ATERF1(2)                   --------->At4g35610                  ----------->ARR10 -->ATERF1(2)          <---------At5g28300                        <-----------HVH21 ->DEAR3(2) ==================bZIP_DOF  --------->ANAC58         <---------MYB46(3) ->RAP2.6(3)--------->TGA1a    <-----------RAV1(1)   <---------ARR14(2)--------->ARR14(2) >SPL7  <---------GLK1(1)--------->ANAC46------>NtERF2 ------>ZmHOX2a(2)<---------GLK1(1)       ----- >MYB52(1)  --------->O2--------->MYB46(3)           --------->ARR14(2)<---------ARR14(2)    <------- ---RAP2.6(2)    --------->At4g35610   --------->ATERF1(1)      --------->ALFIN1   --------->ATHB12 --------At4g35610 <----------DOF2    <---------ATERF1(1) ----------->HVH21       <---------YAB1<----   ctgctgatggagtcccgtctgctttaaccgctactgctggagacgcctctctgtggatcgctcacggtggtcagatctccgtctacgattggagtctttc  2755300  Previous    Next  AGI:  At3g09020.1    Description:  alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein. similar to alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G01250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15800.1); contains InterPro domain Alpha 1,4-glycosyltransferase conserved region; (InterPro:IPR007652); contains InterPro domain Glycosyltransferase sugar-binding region containing DXD motif (InterPro:IPR007577) Range:  from: 2753312    to: 2754626    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g09030.1    Description:  potassium channel tetramerisation domain-containing protein. similar to potassium channel tetramerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G41330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15793.1); contains InterPro domain Potassium channel, voltage dependent, Kv, tetramerisation; (InterPro:IPR003131); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 2754787    to: 2756512    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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