Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         ------>MYB83                                             ---------->DOF2             <---------ARR14(2)                                      <-----------RAV1(1) ==========================HOX2a_HOX2a        --------->LBD16       <-------TEIL<---------At4g35610            --------->ARR14(2)      <---------LBD16        --------->ARR11(3)           ------>ZmHOX2a(2)         --------->MYB46(3)   ---------->DOF2           --------->ARR14(2)         <---------ARR11(3) ------>ZmHOX2a(2)      ---   <---------GLK1(1)         --------->GLK1(2)          --------->ARR11(3)<------ZmHOX2a(2) <--------   --------->CCA1(2)         <---------ARR14(2)   --------->ZAT18  <-----------RAV1(1) ------>MYB46(1) ------->DOF2         --------->CCA1(2)   --------->At4g35610<----------DOF2 ------>ZmHOX2a(1)    ---   taaagaaatgcggagttgatggagataagaggttcttgatatgctgctcaagcgcattgatctctttccctgttggatcctttgcaacctacattgcaca  2709300                                                                                                    <                                                                                                   --                                                                                                  ---                                  ------>MYB83                                                    <--                                  --------->MYB52(1)                                             <---                                  ------>MYB46(1)                                        --------->ANAC58                                XXXXXXXXXXXXXXXXXXXX>MIR1887                             --------->ANAC58                                <---------MYB59                                        ---------->DOF2                             <---------WRKY18(1)               --------->YAB1  <---------ZAT18 <-----                             <-----------GT1      <---------DAG2               --------->ZAT18 ------ ------>ARR11(3)            --------->WRKY38(1)   <----------DOF2              --------->ZAT14<------ -ZAT18  <----------DOF2 <<<<<<<<<<MYB80       <---------ARR11(3)              <---------ZAT14------- ------>AHL20(1)     <----------DOF2           --------->ARR11(3)           ---------->DOF2 ---------   tatattgtcaactttgaagaagactttggtttgaccaaacagagtctaagaactttttcacttaagcataacatgaaatagagcacttacaaagcaatca  2709400       <---------REM1(1)                                                                          <--       <---------ANAC46                                                                          ---- ---------YAB1                                                                                   ---- ------->TOE2(3)                                     --------->ANAC58                           <---- ------>YAB1                                       ---------->DOF2                              ----- -------ICU4                                     ------->GAMYB                                  <---- ------YAB1          <----------DOF2            --------->MYB46(3)                              ----- ----ICU4       ------->TEIL                  --------->MYB52(1)                              ------- --->YAB1   --------------->AtSPL8         --------->ANAC58                               --------->ANAC58 ---ATHB12  <---------------AtSPL3         --------->ANAC58                               --------->ANAC58 -->ICU4    --------------->AtSPL3         --------->ANAC46    ------>ZmHOX2a(1)         --------->PCF2 >WOX13(1)  <---------------AtSPL8      ------->GAMYB--------->ANAC58  --------->GLK1(1)<---------PCF2   tcatcaatggtgtagatgtacttctttttggagaccatgtaaccgaagcaacgacaagcagagtccttgaaggaaatgcaagaggccttgggacccaaga  2709500         <---------ANAC58         <---------ANAC58  <---------WOX13(1) -----TEIL ----->ARR14(1) ----->CCA1(2) -----GLK1(2)                                             <----------DOF2                    -------- ---->ARR14(2)                                          <-----------------------TaNAC69(2)  <-------- -----ARR14(2)    <---------REM1(1)             --------->ICU4      <------ZmHOX2a(2)--------->YAB1 ---->ARR11(1) <-----------RAV1(1)         <---------HSFB2a(2)    <------ZmHOX2a(1) --------->ICU4 ---->ARR10    ------>ZmHOX2a(1)           --------->HSFB2a(2)  <---------TOE1(2)   <---------ATHB12   ttcgattgatgtcgttcctgttgtagagctcgtagtcaaaccctactggaatgttgatgactttcgaaggatcaccatcttgaacaatgatcaaatgata  2709600                                                                                               ------                         --------->ANAC58                                                      ------                  --------->bZIP60(2)                                                          ------                  <---------ALFIN1                                                             ------                  --------->O2                                                                 ------                <---------ALFIN1                      --------->YAB1                  <------NtERF2               <------NtERF2                     <------MYB46(1)                      --------->ALFIN1             <---------ETT(2)                    <------MYB83                       <---------ANAC46   ---------->DOF2--------->REM1(1)             <---------TOE2(2)                   <---------ANAC58 ->YAB1---------->DOF2   --------->ANAC58       <---------TOE1(2)             --------->ATHB12<------ -ATHB12     --------->RAP2.6(2)     <---------ARR14(2)          <---------At4g35610<---------ANAC58   ctgctcaaagaaaggtcgccacatctcaaggaagtcgaggtttcgaatcgtaggtatcacaatgtctagctcatctttcaacattggcgtgggtttcacg  2709700     <---------YAB1 --->ANAC58                       ---------->DOF2                     <---------------AtSPL3 --->ANAC55(2)         --------->ANAC58                 ---------->DOF2<---------REM1(1) --->ANAC46            <----------ID1                --------->ANAC58 --------------->AtSPL8 --->ANAC55(1)         --------->ANAC58              --------->ANAC58 <---------------AtSPL8 --->ANAC58 ------>NtERF2   --------->ANAC58    --------->ATHB12      --------------->AtSPL3 ---LBD16  --------->ANAC46 --------->ANAC58   <---------YAB1 ---------->DOF2        --------->YAB1 <   gaagaatacaattgcgccatttgaaacgacaaggaagaaagagtagtttatgattaagcaaagacaaagagagatgtacgataacaaggatgacttcttg  2709800                                  --------------->AGL15                         --------->YAB1                         <--------HAHB4                       --------->AtLEC2                        <---------YAB1              ----------->GT1              <------------CBF <-----------GT1     --------->DAG2        --------->CCA1(2)<---------ICU4          ---------->DOF2                                    -  <---------AHL20(2)    --------->ICU4   ------->GAMYB <---------KAN4(2)                            - -----------TBP   <---------TOE2(3)   --------->MYB52(1)   <-------TEIL          <----------DOF2-----   gtatttatagagatgagattgagataatcattttcactcttaacggaagaaaaaaggtatattcatgccaaaacatgtttcttcttttcatgttttcaac  2709900                                                       <-----------HVH21                                                  ----------->HVH21                                                 ------->MYC3                                                 <-------MYC3                                                --------->O2                                                <---------bZIP60(2)                                                <---------bZIP60(1)                                                --------->ANAC55(2)                                                <---------O2           --------->ANAC58                     --------->TGA1a           --------->ANAC58                     --------->bZIP60(1)           --------->ANAC46                     <---------TGA1a          <---------ARR11(3)         <-----------GT1                        <---------ANAC55(2)      --------->ARR11(3)  ------->GAMYB            <---------ALFIN1     --------->ANAC46         <---------ARR14(2) -------->ANAC58         =================================bZIP_DOF       --------->ARR14(2)         - -------->ANAC58         <----------DOF2      ------------->DYT1   --------->HSFB2a(2)              < ---->ANAC46         --------->MYB46(3)       <-------------DYT1   <---------HSFB2a(2)        -------   acaacccaaattcacgactctcacccgctctacctctctaaacccaaatcacgtgaccgtcgtctgtttgtagaagatttgttagaacaaaacatgaaaa  2710000                                                                                  <------NtERF2                                                                                 ------>NtERF2                                                                              --------->At4g35610                                 <---------TOE2(3)                         <---------At4g35610        <---------AHL20(1) --------->AHL20(2)                              --------->At4g35610     <---------AHL20(2)   <---------AHL20(2)                               --------->ZAT2   <---------YAB1         --------->AHL20(2)                               <---------ZAT2 -------->AHL20(2)       <---------AHL20(1)                              <------ZmHOX2a(1) ---------AHL20(2)       --------->AHL20(2)                           <-----------RAV1(2) --->DOF2            --------->YAB1<------ZmHOX2a(1)          ---------->DOF2--------->ALFIN1      --   gttttattaatatgttttttttatcaaaataattttaggaattgttttagttgaactgaaatagaaaagaatgcaggagctggtgccatagtggcatagt  2710100                                                                    --------->ARR11(3)               <---------ANAC46                                     <---------ARR11(3)               <---------ANAC58                                     --------->GLK1(2)               <---------ANAC58                                    <---------GLK1(2)          -------            <-----------GT1                                    ---------->DOF2       <---------AHL20(2)         <---------AHL20(2)                                 --------->ANAC58        <---------AHL20(2)    <-------TEIL        ------->TEIL  ---------->DOF2       --------->ANAC58 <---------AHL20(2) <---- --------->RAV1(1)     <XXXXXXXXXXXXXXXXXXXXMIR781     ---------->DOF2 <----------DOF2    <----------   gccacatacatttttttccttgtatgtatttagaaaatttgaaagctctaaacaaactaaagaagcaaagaatctttatttagttttttatttttccccc  2710200  Previous    Next  AGI:  At3g08900.1    Description:  RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); alpha-1,4-glucan-protein synthase (UDP-forming). similar to RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1) [Arabidopsis thaliana] (TAIR:AT3G02230.1); similar to RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2), alpha-1,4-glucan-protein synthase (UDP-forming) [Arabidopsis thaliana] (TAIR:AT5G15650.1); similar to Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (UDP-glucose:protein transglucosylase 2) (UPTG 2) (GB:Q8RU27); similar to unknown [Picea sitchensis] (GB:ABK21236.1); similar to UDP-glucose:protein transglucosylase-like [Solanum tuberosum] (GB:ABA81861.1); contains InterPro domain Alpha-1,4-gluc Range:  from: 2708092    to: 2709720    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g08910.1    Description:  DNAJ heat shock protein, putative. similar to DNAJ heat shock protein, putative [Arabidopsis thaliana] (TAIR:AT5G01390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50141.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971) Range:  from: 2710160    to: 2711901    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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