Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ------>ZmHOX2a(2)                                <---------YAB1>>>>>>>>>TBF1         ------->TEIL                               --------->ARR11(3)                   <---------AGP1                         --------->YAB1---------->DOF2              --------->ARR14(2)              <---------HSFB2a(2) --------->TOE2(3)                 --------->ARR11(3)              --------->HSFB2a(2)--------->ATHB12                   <---------ARR11(3)         ------ -NtERF2   <----------DOF2     <---------ARR11(3)                   <---------ARR14(2)     <---------ZAT6   agcaagaacagagcttttagaagcgtttgataatatcattagaaagaagaagaacatgaacgagtttatggatcttgctatgcccattgagtagtggtat  2702600                >>>>>>>>>ARR2                <------------CBF               --------->ATHB12            <----------DOF2    <----------DOF2                                                                                 <    <---------DAG2       ----------->GT1                                                  ------->GAMYB --->ARR11(3) <---------YAB1                 <------------CBF                            --------->MYB46(3)   cttgagctttttgactttgattgtatgaagtaactagtaagagagagcattgagtttaagtttcaaatatggacatgttcttatgctatcaacgacgaaa  2702700                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                                <---------ICU4                                                                  <---------ANAC55(2)                                                                  --------->ANAC55(1)                                                                  --------->ANAC58                                                                  --------->ANAC58                                                           --------->ATHB12    --------->ICU4 -------                       <----------DOF2                    <---------YAB1     <--------HAHB4   -------                    <---------ARR11(3)         --------->At4g35610--------->ANAC55(2)--------->ANAC55(2)                    --------->ARR11(3)       <------ZmHOX2a(1)  <-----------GT1<---------YAB1 <------                <<<<<<<<<WRKY18            <---------ANAC46<---------ICU4    <---------ICU4   <------               --------->WRKY18(1)      --------->ALFIN1  --------->ICU4    --------->ICU4    <------           ---------->DOF2            --------->ALFIN1  --------->YAB1<------------CBF        ------- ---------------------WRI1      <----------DOF2<---------At4g35610--------->ANAC46   <---------ANAC55(2)   gagtcgaaatgttcaaagtcaaggtctttttgggctatatgtgtggaggagatgactctcatgatttcacgtaattgcataattaatacttgacaatatc  2702800                                                                                                    -                                                                                              -------                                                                                           <---------                                                                                           ----------     ---------->DOF2                                                                      <----------   --------->AtMYB61                                                                      ----------- -->ARR14(3)                                                                              ----------- -->ARR14(2)                                                                              <---------- ---ARR14(2)                   --------->YAB1                                             <---------- ---ARR14(3)                  --------->ICU4                                              ----------- ---ARR11(3)          --------->ZAT18                              <---------YAB1         <---------- -->ARR11(3)          <---------ZAT18        <---------YAB1--------->YAB1     --------->AHL20(2) <---   ttcgaccaaaagaaaacaaaatagtggacaaaatgatgaagaccgctatgatttagcctaaacatgagtcttattggtcataaattttgttagcccatta  2702900  ----------->GT1 --------->DOF2 -->ICU4 ------AGL15                                          <---------AHL20(2) ----->AGL15                                          --------->AHL20(2) -------AGL2                                   <-----------GT1 ------>AG                                 <---------AHL20(2) ------>AGL1                             <---------AHL20(2)                     --------->HSFB2a(2) -------AG                       <---------ANAC58    <---------MYB52(1)        *TSS -------AGL1          ---------->ID1    <---------AHL20(1)          --------->AHL20(2)   --------->AHL20(2) ------>AGL2      <---------ANAC58      <---------ARR11(3)<---------ICU4     <----------DOF2 -------AGL3--------->MYB52(1)   <---------ANAC58  ----------->GT1  <---------AHL20(2)--------->AHL20(2) ------TOE2(3)    <---------ANAC58     <---------CCA1(2) --------->ICU4      <---------DAG2   tggaaagtgaaaactaatgggcttggcccatattagcgtccatatatttttagcagttaattatgtcaaattaaacttacttttggaataaaaaaatcaa  2703000                          <---------ARR11(3)                          <---------ARR14(2)                          --------->ARR14(2)                          --------->ARR11(3)              <----------DOF2             =============HOX2a_HOX2a                      --------->ANAC58             ------>ZmHOX2a(2)                             --------->ANAC58             ==============================HOX2a_HOX2a     --------->ANAC55(2)            ==============HOX2a_HOX2a                      <---------ANAC55(2)            <------ZmHOX2a(2)                             --------------->AtSPL8            ===============================HOX2a_HOX2a    --------------->AtSPL3           --------->AGP1 <-----------ARR10         <---------GLK1(2)           <-----------ARR10                      --------->LBD16           --------->ARR11(3)                    <---------HSFB2a(2)           <---------AGP1<---------CCA1(2)    --------->GLK1(2)           <---------ARR14(2)                --------->ARR14(2)    <---------ANAC58           --------->ARR14(2)                <---------ARR14(2)    <---------ANAC58  --------->TOE1(2)           <---------ARR11(3)                <---------GLK1(2)------->TEIL           --------->TOE2(2)          <---------CCA1(2)     <---------ALFIN1 --------->HSFB2a(2)              --------->GLK1(1) --------->YAB1    ------>ZmHOX2a(1)------>ZmHOX2a(1)  --------->ARR11(3)     --------->YAB1   aaatcaaaattcagatctttcctcttcatatctccctcctctctccagattccagaatatcacgtacttacttggtggtatcagaaatctacgatttttc  2703100                                                                     <---------ARR14(2)                                                                 --------->ZAT2                                                                 --------->At4g35610                                                                 <---------ZAT2                                                                 <---------At4g35610  <------NtERF2                                                                ----------->RAV1(1) <---------ANAC46                    --------->ZAT2                            --------->LBD16       <---------DEAR3(1)                    <---------ZAT2                            --------->At4g35610 <-----------HVH21                --------->ALFIN1                              <---------At4g35610<---------ANAC58              --------->ALFIN1                               --------->ANAC46    <---------ANAC58              <---------ANAC46         <---------STY1(2)    <---------LBD16  --------->GLK1(1)            <---------ANAC46    <---------At4g35610       <-----------GT1    <---------GLK1(1)           <---------TOE2(3)<----------DOF2        <-----------GT1   --------->ARR14(2)   tggtgagggttttgaggtgtggagctagggcttttgctgctagatagttgatttttcaattttccgcagcagaaatgggaaatgcgtcggagaatttcga  2703200           <---------CCA1(2)       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->ARR14(2)     <---------ARR14(2)     <---------AGP1                                                                 <---------At4g35610     <---------ARR11(3)                                                   ---------->DOF2     <-----------ARR10                                               <---------ARR11(3)     --------->ARR14(3)                                              --------->ARR11(3)     <---------ARR14(3)                           <---------TOE2(3) <---------CCA1(2)     --------->ARR11(3)         <<<<<<<<<<WRKY26  <---------YAB1   <---------AHL20(2)      ----------   tattgaagatctcatgtcttatggagacgatttgatcaacttattgaatgttaagaatggttttgatattatatctcaaagttctgagcagttcaaagct  2703300                                <-------TEIL                               --------->CCA1(2)                              <---------ARR14(2)                       <------MYB83                              --------->ARR14(2)                       <------MYB46(1)                           --------->YAB1                          <---------ARR14(2)                    --------->GLK1(1)                              --------->ARR14(2)                  <------ZmHOX2a(1)--------->ANAC46             ----------------->AGL1              --------->ICU4 --------->At4g35610               <-----------------AGL1             <--       <---------ANAC58   <---------ATHB12                     <-----------GT1         <-----------GT1     <---------YAB1 <---------GLK1(1)                         <-----------GT1         --------->AHL20(2) >DOF2 <---------ANAC58 --------->WOX13(1)            <---------MYB52(1)         <---------ARR11(3)   ctcaattttgcttgccatgaggatttcaatcagatacaaggctctattgaaggtcagttttgtttttccgatttggttctctagataatttactagataa  2703400           <---------At4g35610           --------->At4g35610                                        <---------ANAC58       <----------DOF2                                                <---------ANAC58           <---      <---------ANAC58                                              <---------YAB1               ----      <---------ANAC58                                    --------->ANAC58                    ------- <-----------RAV1(1)           <---------AHL20(2)         --------->ANAC46                <------ZmHOX2a(1) -------AHL20(2)          <------ZmHOX2a(1)               --------->ANAC58              <---------TOE2(3)   ataatgtggctttagctggattgagcgaggaatttttttggtttggacgcagattgtaagacgaaactctatgcttgtaagaagaaaactgaggaagcat  2703500  Previous    Next  AGI:  At3g08870.1    Description:  lectin protein kinase, putative. similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01560.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01540.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63849.1); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR Range:  from: 2700361    to: 2702587    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g08880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01570.1); similar to unknown [Populus trichocarpa] (GB:ABK93784.1) Range:  from: 2702979    to: 2704371    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version