Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 ----                                                                                                 <---                                                                                            <--------                                                                                         <-------TEIL                                                                                        --------->ARR14(1)                                                                                        --------->GLK1(2)                                                                                       <---------GLK1(2)                                                       <------MYB83                    --------->ARR11(1)          --------->REM1(2)   <---------ANAC58         <---------MYB46(3)              <---------ARR14(2)         --------->ALFIN1     --------->ANAC55(2)      <------MYB46(1)             --------->ZAT14       <---------ANAC55(1)    <---------ANAC58     <---------MYB46(3)              <---------ZAT18       <---------ANAC58       <---------ANAC55(2) <---------MYB52(1)        --------->ARR14(2) ------       <---------ANAC46       <---------ANAC55(1)<-------GAMYB              <---------ARR14(2)------>NtERF2     <---------At5g28300     <-----------------------TaNAC69(2)     ------->GAMYB  <---------ZAT14 -->AHL20(2)               <---------ARR14(2)  <---------TOE2(3)   --------->MYB46(3)  --------->ARR14(2) --DOF2<---------ANAC58    --------->ARR14(2) <---------At5g28300 <---------At4g35610----------->ARR10   atccttgtaccgtgtcgaattccactgcgaatacgtgattcgatggattaccgttgttggttctgttcaacagacccaaatactgtgcagattcggctcc  2702200            <---------DEAR3(1)            --------->ETT(1)                       ------>NtERF2          <-----------HVH21                        --------->LBD16      <---------LBD16                             --------->LBD16    --------->GLK1(2)                             <---------LBD16   --------->ARR14(2)                             --------->ETT(1)   <---------ARR14(2)                            <---------ANAC46  <---------HSFB2a(1)                            <---------LBD16 ----->HSFB2a(2)                              <---------MYB52(1)                   <----------------- -->ZmHOX2a(1)            ------->TEIL       <-------GAMYB                     ---------->DOF2 ------HSFB2a(2) ---------->DOF2         --------->AtMYB61                   --------->ANAC58    ---- -At4g35610--------->ATERF1(1)          --------->MYB46(3)                   --------->ANAC58 <------ ----->RAV1(2)<------NtERF2        --------->AtMYB61<------NtERF2   ----------->TGA1      ---------->DOF2   tggacgattcggggtcggagaaagtgtgaacgtgaaaccaaaaccaccgttgccgggacttgaagggagtatgacgaagacgaaagaagtgctaaaggaa  2702300                                          <------MYB46(1)                                          <------MYB83                              --------->ANAC55(1)                              <---------ANAC55(2)                              --------->ANAC55(2) --------->At5g28300                              --------->ANAC46   --------->LBD16      <---------ANAC46                              --------->ANAC58   ----------->GT1      <---------bZIP60(2)       <---------GLK1(1)      --------->ANAC58 <---------LBD16        <---------ANAC58 ------TaNAC69(2)   ----------->GT1     <---------WOX13(1)            <---------ANAC58 ----->MYB46(3) <---------ARR14(2)    --------->ATHB12             ----------->TGA1 ----ID1       <------ZmHOX2a(1)     <---------YAB1 ---------->DOF2----------->HVH21    <---------MYB52(1)   caaactttgatatcggaggaattggttaactcacgcaatctgattggtttgcggtaaaacgctgttccagtgacgttttgtttccgattagttagtctaa  2702400                                                                                               <-----                                           <---------ARR14(2)                           <---------ANAC58                                           --------->ARR14(2)                           <---------ANAC58         <---------ANAC58      ------>ZmHOX2a(1)          ========================================bZIP_DOF         <---------ANAC46 <---------ZAT2  <---------GLK1(1)                             <---------ANAC46         <---------ANAC58 --------->At4g35610             <----------DOF2               =============   --------->ATHB12       <---------At4g35610        <<<<<<<<<MYB2                      --------->O2  <---------YAB1          --------->HSFB2a(1)      <------MYB46(1)                      <---------bZIP60(2)  <------ZmHOX2a(2)       <---------HSFC1(2)       <------MYB83   --------->TOE1(2)     <---------TGA1a  ====================================HOX2a_HOX2a <---------AtMYB61     ------->TEIL    <---------O2 <---------ARR11(3)       --------->HSFC1(2)     <---------MYB55(1)  <---------YAB1   <-----------HVH21 --------->ARR11(3)       <---------HSFB2a(1)   <---------MYB52(1)--------->TOE2(2)<---------At4g35610   gaagatcattgtcgtgttggattgtggaagctccttctgtttgaatatccgtttggttttctttgaaacctatgaatgtgaatttcgctgtcgtggcctc  2702500                                                                      ------>ZmHOX2a(2)                                <---------YAB1>>>>>>>>>TBF1         --------->ARR14(2)                         --------->YAB1---------->DOF2              <---------ARR11(3)              --------->HSFB2a(2) --------->TOE2(3)                 <---------AGP1              <---------HSFB2a(2)--------->ATHB12                   --------->ARR11(3) -NtERF2   <----------DOF2     <---------ARR11(3)                   ------->TEIL               ------ =====================bZIP_DOF --------->ARR11(3)                   <---------ARR14(2)     <---------ZAT6   agcaagaacagagcttttagaagcgtttgataatatcattagaaagaagaagaacatgaacgagtttatggatcttgctatgcccattgagtagtggtat  2702600                >>>>>>>>>ARR2                <------------CBF               --------->ATHB12            <----------DOF2    <---------DAG2                                                                                  <    <----------DOF2      ----------->GT1                                                  ------->GAMYB --->ARR11(3) <---------YAB1                 <------------CBF                            --------->MYB46(3)   cttgagctttttgactttgattgtatgaagtaactagtaagagagagcattgagtttaagtttcaaatatggacatgttcttatgctatcaacgacgaaa  2702700                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                                <---------ICU4                                                                  --------->ANAC55(2)                                                                  --------->ANAC55(1)                                                                  --------->ANAC58                                                                  --------->ANAC46                                                           --------->ATHB12    <---------YAB1 <------                       <----------DOF2                    --------->ICU4     <--------HAHB4   <------                    <---------ARR11(3)         --------->At4g35610--------->ANAC58   --------->ANAC55(2)                    --------->ARR11(3)       <------ZmHOX2a(1)  <-----------GT1--------->ICU4 -------                <<<<<<<<<WRKY18            <---------ANAC46<---------ICU4    <---------ICU4   -------               --------->WRKY18(1)      --------->ALFIN1  <---------YAB1    --------->ICU4    -------           ---------->DOF2            --------->ALFIN1  --------->YAB1<------------CBF        <------ ---------------------WRI1      <----------DOF2<---------At4g35610<---------ANAC55(2)<---------ANAC55(2)   gagtcgaaatgttcaaagtcaaggtctttttgggctatatgtgtggaggagatgactctcatgatttcacgtaattgcataattaatacttgacaatatc  2702800                                                                                                    -                                                                                              -------                                                                                           ----------                                                                                           <---------     ---------->DOF2                                                                      <----------   --------->AtMYB61                                                                      ----------- ---ARR14(3)                                                                              <---------- ---ARR11(3)                                                                              <---------- -->ARR14(3)                   --------->YAB1                                             ----------- -->ARR11(3)                  --------->ICU4                                              ----------- -->ARR14(2)          --------->ZAT18                              <---------YAB1         <---------- ---ARR14(2)          <---------ZAT18        <---------YAB1--------->YAB1     --------->AHL20(2) <---   ttcgaccaaaagaaaacaaaatagtggacaaaatgatgaagaccgctatgatttagcctaaacatgagtcttattggtcataaattttgttagcccatta  2702900  ----------->GT1 --------->DOF2 -->ICU4 ----->AGL15                                          --------->AHL20(2) ------AGL15                                          <---------AHL20(2) -------AG                                     <-----------GT1 ------>AGL1                               <---------AHL20(2) -------AGL1                             <---------AHL20(2)                     --------->HSFB2a(2) -------AGL2                     <---------ANAC58    <---------MYB52(1)        *TSS ------>AGL2          ---------->ID1    <---------ARR11(3)          <---------AHL20(2)   --------->AHL20(2) ------>AG        <---------ANAC58      <---------AHL20(1)<---------ICU4     <----------DOF2 -------AGL3--------->MYB52(1)   <---------ANAC58  ----------->GT1  --------->AHL20(2)--------->AHL20(2) ------TOE2(3)    <---------ANAC58     <---------CCA1(2) --------->ICU4      <---------DAG2   tggaaagtgaaaactaatgggcttggcccatattagcgtccatatatttttagcagttaattatgtcaaattaaacttacttttggaataaaaaaatcaa  2703000                          <---------ARR14(2)                          --------->ARR11(3)                          <-----------ARR10                          --------->ARR14(2)              <----------DOF2             =============HOX2a_HOX2a                      --------->ANAC58             ==============================HOX2a_HOX2a     --------->ANAC55(2)             ------>ZmHOX2a(2)                             <---------ANAC55(2)            <------ZmHOX2a(2)                              --------->ANAC58            ==============HOX2a_HOX2a                     --------------->AtSPL8            ===============================HOX2a_HOX2a    --------------->AtSPL3           <---------AGP1 <---------ARR11(3)        <---------GLK1(2)           <---------ARR14(2)                     --------->LBD16           --------->ARR14(2)                    <---------HSFB2a(2)           <-----------ARR10                  --------->GLK1(2)           --------->AGP1<---------CCA1(2)   <---------ARR14(2)    <---------ANAC58           --------->ARR11(3)                <---------GLK1(2)------->TEIL           --------->TOE1(2)           <---------ARR11(3)                --------->ARR14(2)    <---------ANAC58  --------->TOE2(2)          <---------CCA1(2)     <---------ALFIN1 --------->HSFB2a(2)              --------->GLK1(1) --------->YAB1    ------>ZmHOX2a(1)------>ZmHOX2a(1)  --------->ARR11(3)     --------->YAB1   aaatcaaaattcagatctttcctcttcatatctccctcctctctccagattccagaatatcacgtacttacttggtggtatcagaaatctacgatttttc  2703100  Previous    Next  AGI:  At3g08870.1    Description:  lectin protein kinase, putative. similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01560.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01540.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63849.1); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR Range:  from: 2700361    to: 2702587    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g08880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01570.1); similar to unknown [Populus trichocarpa] (GB:ABK93784.1) Range:  from: 2702979    to: 2704371    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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