Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->At5g28300                                                            ------->GAMYB                  <------NtERF2                                                         --------->MYB52(1)              <---------DEAR3(1)                                ------>NtERF2       <---------YAB1---------->DOF2    <---------HSFC1(2)                          <----------DOF2   <-----------GT1 ----------->GT1      --------->ANAC58 ------TEIL            ------->TEIL    --------->ICU4--------->YAB1              --------->ANAC58   gtccattctcgtcgaacacatactgcatctttgcctccacaatgtttaactgttatcatcaacggtaaaaaagaaaacagagtaagaaacgtcgtcgttc  2698800                                                   <---------HSFB2a(2)                                        <---------ANAC46                        <---------HSFB2a(1)                                        <---------ANAC58                       <---------GLK1(1)                                        <---------ANAC58                     ========================                                       <---------LBD16                  <----------CDC5                         ------>ZmHOX2a(2)       <---------REM1(1)     --------->ZAT2   ------>NtERF2                       <---------ARR14(2)        <---------ANAC46      <---------At4g35610                       --------->ARR14(2)      <-------GAMYB       --------->ALFIN1 --------->ANAC46<                --------->YAB1        <-----------GT1  ----------->GT1 <---------ZAT2  --------->DEAR3(1)                --------->ATHB12    <----------DOF2--------->HSFB2a(2) --------->At4g35610<----------DOF2               <---------YAB1--------->SPL7 --------->ALFIN1 ---------->DOF2 <------ZmHOX2a(1)     --             --------->YAB1 --------->ARR14(2)--------->ALFIN1 ---------->DOF2 --------->GLK1(1)   <-   tatgctagaaaacaaaaatgatagggatcggaacgtcgttttacgggtgtgttgtagaagtgaaaaagagcggggctgaggaactctcgccgctttgcga  2698900                                       --------->ATHB51                                 <------NtERF2                                --------->LBD16                               <---------DEAR3(1)                               <---------ANAC46                              --------->ATERF1(1)                              <---------ABI4(1)                              <---------LBD16                              --------->At4g35610                              <------NtERF2                              <---------At4g35610                             <---------RRTF1(1)                             ------>NtERF2                             <---------ERF1                             <---------DEAR4(2)                             <---------ORA47(2)                             <---------ATERF1(1)                             <---------RAP2.6(1)                             <---------RAP2.3(1)                            <---------RRTF1(2)                            <---------RAP2.3(2)                                                   ---                            <---------DEAR3(1)                                                   ----                            <---------RAP2.6(2)                                                 <----                ------->TEIL--------->ALFIN1                                                   <-----        --------->LBD16     <---------RRTF1(3)                                           --------->SPL7       <---------ANAC46     <---------RAP2.3(3)    <------NtERF2                        ------>NtERF2     ------>NtERF2          <---------DREB2C(2)   ------>NtERF2                        ----------->HVH21 ------>ZmHOX2a(2)       --------->DAG2<--------ATHB1                                  <---------SPL7 =======HOX2a_HOX2a     ---------->DOF2<---------ICU4     <---------HSFB2a(2)          --------->DEAR3(1) ---------GLK1(1)       --------->SPL7 --------->ATHB12   --------->HSFB2a(2)        <---------LBD16 ------->ARR11(3)     <---------SPL7  <---------YAB1     <---------LBD16            <---------ANAC46 --------ARR11(3)--------->DEAR3(2)   --------->ICU4 <----------DOF2            <-----------HVH21<---   tgatctctgccgtagatggaccgtcgtaaggcggcggagaataattgaacgggggcattttcggaagttttgtttcggtctcggtctcgcggacggagga  2699000                                           <---------YAB1                                          <---------ARR11(3)                   <---------DOF5.7(2)          <---------At4g35610             --------->ARR11(3)                 <---------MYB52(1)          --------->At4g35610    --------->ANAC58                            --------->DOF5.7(2)       <---------At4g35610       --------->ANAC58                       --------->ANAC46       --------->At4g35610       <------NtERF2                          --------->DEAR3(1)        ---       <---------ZAT2           <---------LBD16                         ------->GAMYB --------->LBD16       --------->ZAT2           ------>NtERF2                          --------->MYB46(3)         --- ------>KAN4(2)                 --------->LBD16                        --------->DEAR3(2)         --- ----->HSFB2a(1)               <---------ANAC58     <---------ANAC46  <---------At5g28300        ---- -------ARR10                  <---------ANAC58     <---------ANAC58 <-----------GT1<---------LBD16 -ZmHOX2a(1)<----------DOF2    <---------ANAC46     <---------ANAC58 --------->MYB52(1) <----------DOF2 ------HSFB2a(1)      <------ZmHOX2a(1) ----------->GT1      ----------->GT1<-------GAMYB      <-----   tgttctctgagctgctgtttgtgaggagccatggcgcggaagaagataattgttccgtttcagtagtgaattaaccgccgttaacttccgcattttttca  2699100                       <----------DOF2                      ------>ZmHOX2a(2)                     <---------RVE1(1)                     <------ZmHOX2a(2)                    --------->ARR14(3)                    <---------ARR11(3)                    --------->ARR11(3)                                                              <                    <---------ARR14(3)                                                              -              <---------LBD16                                                                       -             --------->MYB52(1)                                                                  <---             <---------DOF5.7(2)                                                                 <---  --------->TOE2(3) --------->ARR14(2)                                                           <--- ----------->GT1    <---------ARR14(2)                                                        ------- ------>DREB2C(2)  --------->GLK1(1)                                                      --------->YAB1 ------>DEAR3(1)   <---------GLK1(1)                                                     ----------->TBP ------>At1g77200 ----------->ARR10                             --------->YAB1         <---------HSFB2a(2) ----->DEAR3(2) --------->LBD16                                 *TSS                   --------->HSFB2a(2) ------GT1 --------->DOF5.7(2)                       <---------ANAC46         <------NtERF2 ---------   ccgacgttaaaacgttaccggagatcttttgagagattgagagagagaagagatagagtgtatgaattatcaagtatggcagagttgttctataaaaagg  2699200                                         ----------->HVH21                                       <---------ZAT2                                       --------->At4g35610    ----------->GT1                    <---------At4g35610 ---------ARR14(2)                     --------->ZAT2 <---------MYB52(1) -------->ARR14(2)                     ----------->RAV1(2) -------->MYB52(1)                   <-----------RAV1(2)--------->MYB52(2)                      ----- ------ANAC58                     --------->YAB1 --------->ARR14(2)                          -------- ------ANAC55(2)          <---------AHL20(2)  <---------ANAC58                               <------- ------ANAC58            --------->AHL20(2)   <---------ANAC46                              <-------- -->DAG2      <------------CBF --------->WOX13(1)<---------ARR14(2)                         --------- ->DOF2   <-----------GT1<---------AHL20(2)   <---------ANAC58           <-----------GT1    ---------   cgtaactggtttatactattggcaaaattaaatctatcatcagctgaagcgtgtccgtttgttttggcattgttttatcttcatcccagtttaatacgta  2699300                                              ------>MYB46(1)                                            <---------MYB59       --------->TOE2(2)       --------->YAB1 ------>MYB83       <---------MYB59  --------->AHL20(2)  --------------->AGL15       --------->TOE2(3)<---------AHL20(2)  --------->TOE2(3) -->TEIL               <---------AHL20(1)  ----------------->AG ->ANAC55(2)           <---------AHL20(2)  ========================================================== --ANAC55(2)           --------->AHL20(2)<-----------GT1 -------AtSPL3    --------->TOE2(3) ----------->GT1             <-------TEIL ------>AtSPL8    <---------MYB59 ---------->DOF2   --------->AHL20(2)    <-------TEIL ------>AtSPL3    --------->TOE1(3)--------->DAG2 ----------->GT1    --------->AHL20(2)----------->GT1   cttatcttacctaagtctaacctaaattatttatcaaaaagtataacctaataagttaatatgagattcactaaaatacatgagaaatacagtttaaaac  2699400                                                                       --------->TOE2(3)                                                                  --------->AtMYB61       --------->YAB1                      <---------YAB1                              <---------MYB46(2)     <---------YAB1                      <---------ATHB12           <---------ALFIN1 <---------MYB59      --------->YAB1                   <---------------AGL15        --------->At4g35610 ------>MYB83 --------->ANAC58             --------->ICU4                     <---------At4g35610 ------>MYB46(1)    <--------HAHB4          --------->AHL20(2)                 --------->At4g35610  <---------MYB111(1) <---------YAB1        ----------->GT1--------->YAB1   --------->ANAC58   ---------->DOF2       --------->ANAC46        <---------ANAC55(2)             --------->ANAC58 --------->MYB46(3)      --------->ANAC58 ==================================MADS_MADS <---------At4g35610  --------->MYB46(3)  --------->ICU4<   tccacttattaagtaaatattctaatcatagataagatgagcaagtaagcagcacattaaccaaagtaccaaaccatagagtcacgctattattatagtt  2699500                                             <-----------GT1                                            --------->AHL20(2)                                        <---------AHL20(1)              <---------ANAC46          --------->AHL20(2)              <---------ANAC58    <---------ANAC46              <---------ANAC58    <---------ANAC58                    --------->CCA1(2)          <---------WOX13(1)      <---------ANAC58           ----------------------->TaNAC69(2)        --------->ATHB12         ---------->ID1       <------ZmHOX2a(1)       <---------YAB1<-----------GT1    <---------AHL20(2) <---------ZAT6                        <--- ----------DOF2     --------->AHL20(2)  --------->AHL20(1) <---------YAB1 --------->ANAC46  ---------   ttctttagtttgattggcgtaattaacttgtttttggcgtaattaattaacttgtaggatagtgatagtctgatacacggttctatacaacgaatcacag  2699600                                        --------->At5g28300        ----------->GT1                                 --------->GLK1(1)             --------->ICU4              ---------->DOF2    <---------GLK1(1)        <---------ANAC58      --------->AHL20(2)        --------->ARR11(3)        ----------->GT1  <---------AHL20(2)            <---------ARR11(3)        <---------ANAC58                  --------- ------MYB52(1)            --------->MYB52(1)             <---------ANAC46                 <---------YAB1 >YAB1<---------AHL20(2)   ----------->RAV1(1)    --------->MYB52(1)                  <---------MYB46(3)   ttgtttatttaaattttaaagcatagaaacaacagatatcacagtaacaaaacaactgtgtcgtaatatttgtaaaaaatggtttgagttgttatgaaaa  2699700  Previous    Next  AGI:  At3g08860.1    Description:  alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative. Identical to Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9SR86); similar to AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3), alanine-glyoxylate transaminase [Arabidopsis thaliana] (TAIR:AT2G38400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48832.1); similar to hypothetical protein OsI_011164 [Oryza sativa (indica cultivar-group)] (GB:EAY89931.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21345.1); contains InterPro domain Pyridoxal phospha Range:  from: 2696565    to: 2699164    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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