Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ANAC58           <---------ALFIN1             --------->ANAC58           --------->DEAR3(1)           --------->ANAC46          --------->ATERF1(1)     <-----------HVH21          <------NtERF2           <-----------TGA1         <---------RAP2.6(3)     --------->ANAC55(2)         ------>NtERF2           <---------TGA1a         <---------ATERF1(1)     --------->bZIP60(2)        --------->bZIP60(1)      --------->ANAC55(1)        --------->RAP2.3(2)      --------->bZIP60(1)        --------->ANAC46         --------->TGA1a        --------->RAP2.6(2)      <---------O2        --------->RAP2.3(3)      <---------ANAC55(2)        --------->DEAR3(1)       --------->O2        --------->ATERF1(2)      <---------bZIP60(1)     --------->ANAC46            --------->ANAC58    <-------MYC2                 --------->ANAC46    ------->MYC3                 --------->ANAC58                                              <-----    <-------MYC3                <-----------STF1                                               ------    ------->MYC2             <-----------HVH21                                              ---------   <---------ALFIN1         ------->GAMYB                                                  --------->MYB46(3) --------------->PIF3(1)    ===============MYC_MYB                                        <---------At4g35610 ------>ANAC58  ===========================bZIP_DOF                                       --------->At4g35610 -------ATERF1(1)    ----------------->AGL1                                          --------->ZAT2 ------>ANAC58  <----------DOF2<---------ALFIN1             <------------------SPL14--------->ANAC58 --ZmHOX2a(1) <---------DAG2----------->HVH21      <---------YAB1------->TEIL       --------->ANAC58 ----RAV1(2)------>NtERF2--------->MYB52(1)       --------->AHL20(2)           <----------ID1------>NtERF2 >HVH21 <---------ATERF1(2)--------->MYB46(3)    --------->YAB1  <---------LBD16<------ZmHOX2a(1) ---   aggccacatgccgccaccctttggccacaacggacacgtcacaaacaacaattataatcccaacatgtacggaggctatggaggacaagctcagccacca  2670800          <---------HSFB2a(2)          --------->HSFB2a(2)      <---------ANAC46    --------->ARR11(3)    --------->GLK1(2)     --------->ANAC46                                                          <    <---------ARR11(3)    --------->ANAC58                                                          -    <---------ARR14(2)    --------->ANAC55(2)                                                    ----    --------->ARR14(2)    --------->ANAC58                            ------>MYB83              -----   <---------ARR14(1)    <---------LBD16                              ------>MYB46(1)           ----- ----ALFIN1              ------->TEIL                       --------->YAB1                 --------->RAP2.6(2) --->AtMYB61    ----------->RAV1(1)                      --------->YAB1                  --------->At4g35610 >RAP2.6(2)    <----------ID1<---------GLK1(2)         ------------>CBF               --------->At4g35610 -------->RAV1(1) --------->MYB46(3)      <<<<<<<<<<<<<<<<<LFY        -------->P      <---------At4g35610   caacagtatcttgtagaacaacaaatgtacggaatgtctcttcaagacaatggaaacaacaatactaatccctaccaagtttcttctcatcagcctccac  2670900                                                                                    <------ZmHOX2a(1)            <---------ATHB12                                                  =======================   <---------REM1(1)                                                          --------->O2 --------->YAB1                                ------>ZmHOX2a(2)              --------->TGA1a <---------ICU4                              <---------ARR11(3)              ------>MYB83 ---------ATHB12                             --------->ARR11(3)              ------>MYB46(1) -------->ICU4                           <------MYB46(1)                    <---------ALFIN1 ----->AtMYB61                           <------MYB83                --------->ANAC46              -- ------->CBF<---------YAB1              --------->MYB46(2)           --------->ANAC58    --------->ZAT2 ---->MYB46(3)   --------->YAB1         <---------MYB46(3)           --------->ANAC58    <---------ZAT2   caatgatgaagcctatgaataagaaaccagaagacaagttgtttggtgatcttgttgaactctccaagttcaagaaacccacttcaggacgagctggtag  2671000                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  <--             <----------DOF2                                                                     ----             <---------DAG2                                                                  --------          <---------ALFIN1                                                                   <------- =======================bZIP_DOF                <---------DAG2                 --------->ANAC46  ---- --------->GT1  ---------->ARF1                 <----------DOF2        ---------->DOF2   --------->AHL20(2)   tatgtaaaatccacacttttctcccaaattatagatttcaaaaatgttgactttattttttgtttgacttcgataaagaacaccgaatttttaaaataaa  2671100       <-----------GT1      ---------->ID1 <----------DOF2 ------>AHL20(1) ------>ARR11(3)        <---------ZAT14 -------AHL20(1)        --------->ZAT14 -------ARR11(3)  --------->YAB1                      <---------bZIP60(1)                     ------- ----->RVE1(1)    <-----------GT1                     --------->bZIP60(1)               ------>ZmHOX2a(1) ->AHL20(2)    --------->YAB1                    <---------ICU4                       <---------LBD16 --AHL20(2)  --------->AHL20(2)              <<<<<<<<<TBF1          <------ZmHOX2a(1) ----------->RAV1(2) ----->CCA1(1)<---------AHL20(2)          <<<<<<<<<TBF1    <---------YAB1        <---------GLK1(1)   tatcttttgtcaccatataataacagttcagagtttctcacttcttcttcttcatgacttcatcaatggaggaagacgactcgatttctcctgaatcaat  2671200                                           ------>NtERF2                                           ----------->RAV1(1)                                          ----------->HVH21                                          --------->DEAR4(1)                                          --------->DREB2C(2)                                          --------->RAP2.6(2)                                          <---------ETT(1)                                          --------->DEAR3(1)                                          --------->RAP2.3(3)                                          --------->At1g77200                                --------->ICU4                              --------->YAB1  <---------HSFC1(2)                              <---------ICU4  --------->HSFC1(2)                                  <--                             <---------ATHB12<---------ALFIN1                                --------        --------->ANAC58 <---------ZAT18------->GAMYB               <---------DEAR3(1)       --------        --------->ANAC58<-----------HVH21--------->RAP2.3(1)       ------>ZmHOX2a(1)         <-------      <---------ALFIN1 <------MYB46(1) --------->ANAC46       --------->GLK1(1)    ------>ZmHOX2a(1)   <---------ETT(2)    <------MYB83<---------YAB1             <---------GLK1(1)   --------->TOE2(3) - -->WOX13(1)          --------->MYB59  --------->DEAR3(1) --------->At5g28300 <---------GLK1(1)   ---   ctctctcgacactctagcttctattaggtcactcattatcaacgccgacacttccgactcggtgatttcctcggtgttcgatttccttactggtcttctg  2671300                --------->ARR14(2)                <---------ARR14(2)          <---------DEAR3(1)       --------->GLK1(1)       <---------GLK1(1)                                  ------>NtERF2     <---------ZAT18                                     <---------LBD16     --------->ZAT18                         ------>NtERF2--------->LBD16 -------At4g35610                           --------->DEAR3(1)                   --------->ARR11(3) --->RAV1(2)    <-----------ARR10           ----------->HVH21 ---------->DOF2    <---------ARR11(3) ->At4g35610    --------->GLK1(2) --------->ANAC46      <---------LBD16          --------->ARR14(2) --At4g35610<------NtERF2         --------->ANAC58   <----------DOF2             <---------ARR14(2) -------->DEAR3(1)                --------->ANAC58  <---------ANAC58            <---------CCA1(2) ------>At4g35610              ------>ZmHOX2a(1)    <---------ANAC58      ----------->RAV1(1)    ----   agccgagggaactcggcgattcttcaccatgtcctcaagctactctccgaccttgctttccggcgaaaggaattagcaccacaaatcttcgattcaatcc  2671400                                                        --------->LBD16                                                       --------->DEAR3(1)                                                       <---------ANAC46                                                     --------->ABI4(1)                                                     ------>NtERF2                                                    --------->RRTF1(2)                                                    --------->RAP2.3(3)                                                    --------->RRTF1(3)                                                    <---------DEAR3(1)                                                   --------->ORA47(2)                                                   --------->ERF1                                                   --------->DEAR4(2)                                                   --------->RAP2.3(1)                                                   --------->RRTF1(1)                                                   --------->ATERF1(1)                                                   --------->DEAR3(2)                                                   <------NtERF2                                                   --------->RAP2.6(1)         <-----------TGA1                                                  ------>NtERF2               <---------ANAC46                                           --------->MYB46(3)             <---------ANAC58                                           --------->ANAC58               <---------ANAC58                                      --------->ANAC58<------NtERF2  <---------ANAC58                                      --------->ANAC58--------->ATERF1(1)--------->ABI4(2)  ---------                                    <---------ANAC58--------->RAP2.3(2)  <---------MYB46(3) <--------                              <----------CDC5     <---------ATERF1(1)<---------ANAC58       ---------                             <---------At4g35610 --------->ANAC46    <---------DEAR3(1)     ---------                             --------->At4g35610<---------ABI4(2)<---------ANAC58  --------->ICU4            --------->LBD16 <---------DEAR3(1)------->TEIL  <---------ARR14(2)<---------ANAC58            ------>NtERF2 <-----------HVH21<---------MYB52(2)    <---------ANAC58  <---------YAB1          <---------LBD16--------->DEAR3(1)--------->ANAC58 --------->ARR14(2)<---------ANAC58 ------ -->ZmHOX2a(1)   --------->YAB1     <---------ANAC58--------->DEAR3(1)  --------->ALFIN1   --------->SPL7   tgtccaacttactccgccttcataacaccgtcgctgaggcgagccacgaacgcgccgccgtggaatcgcttgcggtgcttgcgtcattatccgaacgaac  2671500                    ----------------->AG                 <----------DOF2             ------>NtERF2             <------NtERF2             --------->LBD16            --------->DEAR3(1)           <------NtERF2           --------->ATERF1(1)           <---------DEAR3(1)          <---------ATERF1(1)          <---------RAP2.3(1)         --------->RAP2.3(3)         --------->ANAC46         --------->ATERF1(2)         --------->DEAR3(1)                                                     <---------MYB46(3)         <---------ATERF1(2)                                                    --------->ALFIN1         <---------DEAR3(1)                                                     <-----------RAV1(1)         --------->RAP2.3(2)                                                   <---------DEAR3(1)        --------->DEAR4(2)                                                    <---------At4g35610        --------->ATERF1(1)                                                   --------->ZAT2        --------->ERF1                                  <---------LBD16       --------->At4g35610      --------->DEAR3(1)                         <---------ARR14(2)           <---------ZAT2 >ANAC58--------->RAP2.3(1)                 <---------ANAC58                  ----------->RAV1(2) -MYB52(2)--------->ABI4(1)                 <---------ANAC58         --------->ARR14(2) >MYB46(3)------>NtERF2        ------>NtERF2<---------ANAC46         --------->ARR11(3)            -- >ANAC58--------->ORA47(2)    --------->DEAR3(1) --------->ARR14(2)  <---------ARR11(3)          <--- ->TEIL<---------ATERF1(1)    ----------->HVH21----------->ARR10    <---------CCA1(2)        <------ZmHOX2a(1)   ccctagcatcgccgccgcgctttccaaaatcgacgacgaggtatttgcgtcgatttgcctcggagcacctatatcttctcggctgtggctacttaggaac  2671600                                                                <---------ARR11(1)                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                             <---------ANAC58                                                             --------->ANAC55(2)                                                             <---------ANAC55(2)                                                             <---------ANAC58                  <---------MYB52(1)                         <---------ANAC55(1)                 <-----------HVH21                          ------>ZmHOX2a(2)       <-------TEIL                                        <------ZmHOX2a(2)    <------MYB46(1)                                       --------->GLK1(2)    <------MYB83<---------ANAC58                          <---------ARR14(2) --------->ARR14(2)     --------->ZAT14                   --------->ARR14(2)                        < <---------ARR14(2)     <---------ZAT14      <---------TOE1(3) <---------CCA1(2)    --------->At4g35610 ------->LBD16  <---------ANAC58             <---------TOE2(3)--------->LBD16  --------->DAG2     --- ------LBD16    <---------ANAC46<-----------GT1          <------ZmHOX2a(1)    ---------->DOF2    ----   gcggataggttcaatgttccgtcgtctgtactattcaccttgtttttagggtttagtaaggatccgtatccatatatcagaaaagtagctctcgatggac  2671700  Previous    Next  AGI:  At3g08790.1    Description:  VHS domain-containing protein / GAT domain-containing protein. similar to protein transporter [Arabidopsis thaliana] (TAIR:AT4G32760.1); similar to VHS and GAT domain protein [Glycine max] (GB:ABB90835.1); contains InterPro domain GAT; (InterPro:IPR004152); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain VHS; (InterPro:IPR002014) Range:  from: 2667887    to: 2671007    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g08800.1    Description:  binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO48793.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 2671154    to: 2675202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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