Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------At4g35610                                                                                       --------->At4g35610                                                                                      ------>NtERF2                                                                                     <---------RAP2.6(2)                                                                                    --------->RAP2.6(3)                                                                                  ----------->TGA1                                                                                  ----------->HVH21                                                                                 <-----------HVH21                                                                                --------->O2                                                                                <---------O2                                                                                <---------ANAC55(2)                                                                                <---------bZIP60(2)                                                                                <---------TGA1a                                                       ----------->GT1          =====================                                                     <--------P                 <---------bZIP60(1)                                                     =========================MYC_MYB<---------ANAC46                                                     =====================================MYC_MYB           --------->ANAC58                        <------MYB46(1)              --------->ANAC55(2)    <---------ANAC55(2)                            <------MYB83                 --------->bZIP60(1)    --------->ANAC55(1)                          <---------WOX13(1)             =====================    --------->ANAC58                           --------->ATHB12            --------->CCA1(2)---------    --------->ANAC46                         ------>ZmHOX2a(1)      ======================bZIP_bZIP    --------->ANAC58                     <---------ARR14(2)         <---------O2--------->TGA1a     <   <---------LBD16 <-------TEIL          --------->ARR14(2)         <---------TGA1a--------->MYB52(1) ----->DOF2--------->ANAC58             <---------GLK1(1)           =================================   aagaacacggatgaagccatgttcatcgatctagggttttgcaaatcctcgattggtaagtgaaattgagacgagagagacgacgtgacggctaactctc  2667100                                        --------->ANAC58                                        --------->ANAC58                                        --------->ANAC46                                        ------>MYB46(1)                                      --------->AtMYB61  <-----------HVH21                                <------NtERF2            <---------MYB52(1)                              <---------ANAC46          --------->At4g35610                              <---------DEAR3(1)      --------->SPL7                            ------>NtERF2            --------->PCF5              <---------At4g35610    --------->MYB46(3) <---------At4g35610           <---------MYB52(1)--------->ATERF1(1)   <---------MYB46(3)          <-------GAMYB ------>ZmHOX2a(1)--------->MYB46(3)         <---------DEAR3(2)<---------ATERF1(2)    --------->ALFIN1         <---------MYB46(3)--------->ATERF1(2)  <------MYB83        <---------DEAR3(1) <---------RAP2.3(3)  <------MYB46(1)<---------ZAT18    <---------WOX13(1)<---------ANAC58--------->DEAR3(1)--------->LBD16 ==================MYC_MYB<---------ANAC58     --------->MYB46(2)                            <------- =================MYC_MYB<---------LBD16------>MYB83<---------SPL7                           <------- >ZAT6------------>AtMYB77<---------ANAC46     --------->MYB111(1)                     ------>NtERF2 ---------WOX13(1)    <---------ANAC58<---------ALFIN1<---------LBD16                 --------->ANAC46 ==================MYC_MYB<---------ANAC58     --------->MYB59 --------->ZAT18     ----------->HVH21-   tcattgatggacggttagcggttttcctgcgggcggagaaccacccaattaggtggtccggtgagtcgactcggagggaatcgattcgacgcgagtcaac  2667200           ===============HOX2a_HOX2a                        <------NtERF2           ------>ZmHOX2a(2)                                ------>NtERF2          <------ZmHOX2a(2)                                <---------ETT(2)                         -          ================HOX2a_HOX2a                     <------NtERF2                             -         --------->ARR14(2)                             <---------DEAR3(1)                        ---      <xxxxxxxxxxxxxxxxsmallRNA(s)                 --------->MYB52(1)                           <----    --------->MYB52(1)                        <---------ANAC58                     <---------ARR14(2)  ---------->DOF2                          --------->DAG2------>NtERF2   <---------At4g35610   ------ --------->WRKY18(1)                      ---------->DOF2<---------ATERF1(1)      <------ZmHOX2a(1)-- --WRKY12<---------ARR14(2)            --------->At4g35610--------->ATERF1(1)  <------ZmHOX2a(1)----- --WRKY38(1)                 <-----------GT1  <---------ANAC58         <-----------RAV1(2)     <----- ----->NtERF2      <------ZmHOX2a(1)<---------At4g35610 --------->ALFIN1 --------->At4g35610  -------   tcggccaagcggatcgtagaaggagacagttttaccagagcagataaagcttgtaacggtggcgacaatttgatcagatgaggaggaactcgaggcgata  2667300                                                                     ----------->HVH21                                                                    <-----------HVH21                                                                    <-----------TGA1                                                                   --------->bZIP60(2)        <---------ARR14(2)                                         --------->TGA1a        --------->GLK1(2)                                          ================================MYC_MYB        --------->ARR14(2)                                         --------->ANAC46    <------NtERF2                                                  --------->bZIP60(1)   --------->LBD16                                                 <---------O2  --------->DEAR3(1)                                               <---------TGA1a <---------LBD16                                          --------->ANAC58 ----->NtERF2                                             --------->ANAC46 -------->LBD16                                           --------->ANAC58 ------>MYB46(3)                          <---------ARR14(2)       --------->O2 -----ARR14(2)                            --------->ARR14(2)       <---------bZIP60(1) --->GLK1(1)                         <---------ANAC46  <------ZmHOX2a(2) ------->ANAC46                  --------->ARR14(2)   ----------------------->TaNAC69(2) ---->ARR14(2)                   <---------ARR14(2)   <---------ARR11(3)                   <-------GAMYB ----GLK1(1)                   ----------->ARR10      --------->ARR11(3)              ------->TEIL ---->ARR10<-----------HVH21 --------->CCA1(2)    <------NtERF2   <-----------STF1 <---------REM1(1)   tccgccggagaatcgtcggatagattagaagagacgattcggtggatttggccgaagatcaagccatcgacgtcactgggagaagatgaagctcgttgaa  2667400                                                                                                   <-                                                                                           <---------                                                                                          <---------ANAC58                                                                                          --------->bZIP60(2)                                                                                          <---------bZIP60(1)                                                                                          --------->ANAC55(2)                                                                                          <---------ANAC55(2)                                                                                          --------->ANAC58                                                                                          <---------TGA1a                                                                                          --------->bZIP60(1)                                                                                          --------->ANAC58                                                                                          --------->TGA1a                                                                                          --------->TGA2(1)                                                                                          <---------ANAC58                                                                                          <---------TGA2(1)                                                                                          <---------O2                                                                                          <---------bZIP60(2)                                                                                          --------->O2                                                                                       ----------->TGA1          <-----------RAV1(1)                                                          ----------->HVH21     ------>NtERF2 --------->ANAC58                        <------NtERF2              <-----------HVH21    --------->bZIP60(1)                                   ------>NtERF2         ---------->DOF2    --    --------->ANAC58                                     <----------ID1         ====================bZIP_DOF    <---------bZIP60(1)                         ------>ZmHOX2a(2)            <----------ID1<---------    --------->ANAC58  --------->GLK1(1)        <------ZmHOX2a(2)          ---------->DOF2----------->STF1 ----------->TGA1  --------->ANAC46           --------->ARR11(3)          ==========================bZIP_DOF ----------->HVH21 --------->ANAC58           <---------ARR11(3)        --------->AtMYB61<-----------STF1   tcagtgacgccaatgttggacccgaaatctcgattttctctagagagagatcgtccatggcgacgagaagaacaccaaaaggaaaagatgtgacgtcact  2667500                                                                  <---------ANAC55(1)                                                                  --------->ANAC55(2)                                                                  <---------ANAC58                                                                  <---------ANAC55(2)                                                                  <---------ANAC58                                                                  <---------ANAC46                                                             <---------ANAC58                                                            <------NtERF2                                                          --------->ALFIN1                                                        --------->O2                                                        <---------ANAC58                                                        <---------O2                        <--------                                                        <---------ANAC46                    <--------                                                        --------->TGA1a                     <--------                                                        <---------ANAC58                   ----------                                                        <---------bZIP60(2)              --------->ALFIN1 --------GLK1(1)                                        <---------TGA1a                <---------ANAC46 --HVH21                                  --------->At4g35610<---------ANAC46          <---------ANAC58 ------->GLK1(1)         ----------->GT1  <---------At4g35610<---------ANAC58          <---------ANAC58 --TGA1          --------->AHL20(2)    *TSS        <------ZmHOX2a(1)             --------->MYB111(1)   gaaatctctctctgtgcaaataaaaacgagataaaaattgtatcagcacattaggacgacgtggcgtttcgtgttctaacgagtagttagcgtgtcgttt  2667600                                                  ---------->DOF2                                               --------->TOE1(3)                            ---------  ---------->DOF2                      <---------MYB52(1)                          ----------->GT1 -ANAC58                              <-------GAMYB      --------->WOX13(1)    ---------->DOF2 -ANAC46                             ----------->GT1  ------------------------>ANAC81     <---------YAB1 -ANAC58                          ------>NtERF2--------->TOE2(3) ----------->GT1  ----------->GT1  -- >ID1                     <---------ALFIN1  <-----------GT1<---------ATHB12 --------->AHL20(2) ------   ttgtgaaagaaaatgggcataaatgtccacactcgaggcccgttattcaccttaaagcccaatcaaacagaaaaacattttaaaagggaaatatgaaagg  2667700                                                              <------NtERF2                                                             ------>NtERF2                                                            --------->bZIP60(1)                                                <---------MYB46(3)                                --------->ANAC46--------->ABI4(2)                              --------->At4g35610<---------ANAC58                     <------------CBF  --------->ANAC58     <---------bZIP60(1)         ------>ZmHOX2a(1)<---------REM1(1)  ------->GAMYB  <---------ETT(2)        --------->TOE2(3)<---------TOE2(3)--------->MYB52(1)--------->ETT(2) ->DOF2 --------->ANAC55(2)   <---------At4g35610<---------ANAC58 ------->WOX13(1)   <---------AtLEC2   --------->ANAC58  <-----------RAV1(1) ----->GT1      --------->At4g35610  <---------MYB52(2)  --------->ALFIN1   --------->MYB52(2) ------   tcaattagttccttaatcttctgcattgatgtagcagcaactagcaacggtgcttacaagtgtcgccatgttgtttcttagttgcaaattaagaagagag  2667800                                                                                                   <-                  <---------REM1(2)                                                                <-      <----------DOF2                                                                             <--   --------->AHL20(1)                                                                            <---   <---------AHL20(1)                                                                           <----   <---------ARR11(3)                                                                          <-----   --------->ARR11(3)--------->ANAC46                               <------ZmHOX2a(1)         ------>ZmHOX2a(1)  --------->CCA1(1)  --------->ANAC58      --------->At4g35610     ----------->GT1      <-------TEIL  --------->RVE1(1)  --------->ANAC58      <---------At4g35610   <---------------------WRI1   <------ ----->GT1<-----------GT1         <---------ALFIN1           <------ZmHOX2a(1)      --------->ALFIN1   caaaatatctttttacagactacaaggaagaaaacaacacttcttagctcagagttttttgaaggacagaggaaaaaaccaagaagatggtgcatccttt  2667900                                                                        --------->ICU4                                                                        <---------ATHB12                                                          <---------ANAC55(2) --------WOX13(1)                                         --------->ANAC55(2) -------P               --------->ATHB12                --------->CCA1(2) -----GAMYB            <---------YAB1                  <---------ARR14(2)                        ---- ------MYB46(3)   --------->CCA1(2)                    --------->ARR14(2)                   <-------- -----AtMYB61--------->ANAC46                  ------->TEIL ----------->HVH21 ------->TEIL  <-------- ----MYB52(1)--------->ANAC58    ----------->HVH21     <---------ARR11(3)<---------ICU4  --------->ARR11(3) ----DOF2    --------->ANAC58    ------>ZmHOX2a(1)     --------->ARR11(3)--------->YAB1  <---------ARR11(3)   ggttgatagagctacaagcgatatgctcattggtcctgactgggccatgaacctcgagatatgtgacatgcttaatcatgagcctgggtaagaccttttt  2668000  Previous    Next  AGI:  At3g08780.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO48785.1) Range:  from: 2666085    to: 2667539    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g08790.1    Description:  VHS domain-containing protein / GAT domain-containing protein. similar to protein transporter [Arabidopsis thaliana] (TAIR:AT4G32760.1); similar to VHS and GAT domain protein [Glycine max] (GB:ABB90835.1); contains InterPro domain GAT; (InterPro:IPR004152); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain VHS; (InterPro:IPR002014) Range:  from: 2667887    to: 2671007    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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