Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------YAB1   <------MYB83   <------MYB46(1)   ----------->GT1  --------->MYB59  <---------TOE2(3) ----->HAHB4 ----->ATHB1 ------>YAB1                            <-----------GT1 -------AHL20(2)                     <---------GLK1(2) ------HAHB4                         --------->ARR11(3) ------>ATHB12                       <---------ARR11(3) -------ICU4                       <---------TOE1(3) ------>ATHB51                 <----------DOF2                          <----------ID1 ------YAB1                   --------->TOE2(3)                       ---------->DOF2     --------->ATHB12 ------ATHB51             <---------ANAC58                           ------------------------>ANAC81 ----->ICU4               <---------ANAC58                <---------ARR14(2)             --------->ICU4 --->YAB1  <---------YAB1--------->HSFC1(2)      ---------->ID1--------->At5g28300 --------->DAG2 ----ICU4--------->YAB1  --------->At4g35610 <---------ANAC58 <---------ZAT6      ---------->DOF2 -->AHL20(2)             <---------HSFC1(2)  <---------ANAC58 ----------->GT1 <----------ID1    <---- ---AHL20(2)  --------->ARR11(3)   <---------TOE2(3)      --------->ARR14(2)---------->DOF2   <------   ttattaggttattatagttcttgtagtagcttcctttaagattttctgcttgtctcactggatactgtaaaaaaaagaaaaagaaaaaggaattagtggt  2664400                                                                                                    -                                                         <-----------HVH21                          -               <---------------------WRI1               <-----------RAV1(1)                         -               <------ZmHOX2a(2)                      ----------->RAV1(2)                           -        <---------HSFB2a(2)                         <-----------GT1                                --        --------->HSFB2a(2)                       <----------DOF2                                  <x --------->ARR11(3)       ---------->DOF2     ------->TEIL                                        --- <---------GLK1(2)     --------->YAB1     --------------->AtSPL8                              <------ZmHOX2a(2) <---------ARR11(3) --------->YAB1        <---------------AtSPL8                             -------- -----ANAC46  --------->ARR11(3)          --------------->AtSPL3   --------->At4g35610       <------- ---MYB46(3)  <---------ARR11(3)         --------->At4g35610   <-----------HVH21            ---------   ttagatttttctacaagatcagtaatcacaaagagagagagtgagatgtactctttacctgtcgcagtcagtggaagggctgaacttgtaagggagatcg  2664500                                        >>>>>>>ZML2                                        --------->HSFC1(1) --------------->AGL15                  --------->HSFB2a(2) <---------ALFIN1                  <---------MYB46(3)                                               - -------->ANAC58                   <------MYB83                                               ------- ---------------->AGL2             <------MYB46(1)                                           -------- ---------------->AGL3             --------->HSFC1(2)                             =================== -------->ANAC58                   <---------HSFC1(2)                             ------->GAMYB     < ---->NtERF2         ---------->DOF2    <---------HSFB2a(2)                       ----------->RAV1(1) xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------HSFC1(1)                       --------->ANAC58   < ------>ANAC46  --------->GLK1(1)  --------->HSFB2a(1)                           --------->MYB46(3) < ->ARR14(2) --------->ANAC58       <---------HSFB2a(1)                <---------ARR14(2)   ========== --ARR14(2) --------->ANAC58    <---------AtLEC2           ------>ZmHOX2a(1)     --------->ANAC58   - >GLK1(1)  <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)<------ZmHOX2a(1)          --------->ARR14(2)   ----------   acaccacatttagaaggcaattccaaagcattttggatggttctaggagagagagtgagtcctccaatagcagatttgatgcaacgacagaccccctgac  2664600                                                                                       --------->ANAC58                                                                                    <xxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                              --------->O2                                                                              <---------O2                                                                              <---------ANAC46                                                                              --------->TGA1a                                                               <---------ARR14(2)  ==================                                                         ----------->HVH21    --------->ANAC55(2)                                                        <------MYB46(1)       <---------ANAC55(2)                                                        <------MYB83          <---------TGA1a   --------->ANAC46                                    --------->ALFIN1       ======================= ==========================RAV                        <--------P          <-----------HVH21  -------- ----------->RAV1(1)                                  --------->ALFIN1==================MYC_MYB -------->ETT(2)                                      ==================================MYC_MYB     - -->MYB52(1)                            ================================================MYC_MYB     < --->HVH21                     <---------ANAC46      <-------GAMYB    <----------CDC5  --------->ANAC58 ==RAV                       <---------ZAT14  --------->ZAT2   <-----------HVH21   <------ZmHOX2a(1)- ---------ZAT14              --------->ZAT14  --------->At4g35610  ------>NtERF2   ================== ---------ETT(2)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <------NtERF2 <---------TOE1(2)  - ---------WRKY38(1)       <---------ANAC58    <---------ZAT2   --------->ARR14(2)<---------TOE2(2)  < ============RAV          <---------ANAC46    <---------At4g35610--------->SPL7--------->TOE1(2)    - -------->ZAT14           <---------ANAC58   ----------->RAV1(1)<xxxxxxxxxxxxxxxxxxxsmallRNA(si3) --- ->RAV1(2)     ----------->RAV1(2)      <-------GAMYB===================================MYC_MYB -----   ggtccacagaagtttgagcctgactcttgagtgttgtgagaccgttgcagcagagggttgggaccggtccgccctgagtcacgtaggataagcaagggta  2664700          <---------At5g28300         --------->YAB1        --------->MYB46(3)      --------->WOX13(1)    --------->LBD16   --------->ANAC58   --------->ANAC58   --------->ANAC46   --------->ANAC55(2)  ------>ZmHOX2a(2)  <---------LBD16 --------->ARR14(1) <------ZmHOX2a(2) --------->CCA1(2)                     <---------ZAT14 =======HOX2a_HOX2a                 <---------At5g28300 ======bZIP_DOF                  <----------DOF2--------->ANAC58 --->GT1<---------ATHB12         <-----------HVH21 -------->ARR14(2)             --------->At4g35610 ---------ARR11(3)          <---------At4g35610 --------->ANAC58 --------->ANAC58           <-------- -------->ARR11(3)        --------->ANAC58    ---------->DOF2    --------->ANAC46        <-----------GT1 ========HOX2a_HOX2a      --------->ANAC58 <---------ZAT6        --------->ANAC58 ------>ZmHOX2a(2) -------->ARR11(1)   --------->ANAC46  --------->ZAT14         <---------ALFIN1  <------ZmHOX2a(2) ---------ARR14(2)   --------->ANAC58 --------->DEAR3(1)   --------->AtLEC2     <---------ARR11(3) -------->AGP1       --------->ANAC58--------->ANAC46     --------->ANAC46      --------->ARR11(3) -------->ARR10    <---------AtLEC2<---------ALFIN1 --------->ANAC58           <---------GLK1(1) ----->DOF2   --------->ALFIN1 <---------At4g35610  --------->ANAC58           --------->GLK1(1)  <--   aagatccgcaatcaccgtgttgcaagacacggctgcttcaccgcagtgtaaagcaagaaccaggcacacggctaataagagagatctcatgttactttct  2664800                                                                                          <------ZmHOX2a(1)                                                                                        <---------TOE2(3)                                                                                    <-------GAMYB                                                                                    =================                                                                                   --------->MYB111(2)                                                                                   <---------MYB46(3)                                                                                   --------->MYB52(2)                                                                                   --------->MYB111(1)                                  *TSS                                             --------->MYB55(2)                                 <---------ZAT6                                   <--------P                          <---------YAB1                                          ===================                          <---------TOE1(3)                                     <------MYB83                          <---------TOE2(3)                                   <---------WOX13(1)             <---------ANAC46   <---------TOE2(3)       <---------AHL20(2)   <------------CBF      <- --DOF2    <---------ANAC46     <---------TOE1(3)----------->GT1 ---------->DOF2<------MYB46(1)   <-- -------MYB52(1)     <---------ZAT6  ----------->GT1  <-----------TBP      <---------TOE2(3)     ----   gtttttttttttttggtgtatttgtgttatggttagggttagaaaatagagaggttatttatagatggaaagagtttgagattggtagttgaggaagagt  2664900                                                                           ------->GAMYB                                                                         ------>MYB46(1)                        --------->MYB46(2)                               -------->P                     <<<<<<<<<<AtWER                                     ------>MYB83          ===========================MYC_MYB                         <------ZmHOX2a(2)          --------->O2  --------->MYB111(1)                          --------->CCA1(2)          --------->TGA1a        --------->HSFB2a(2)                --------->ARR11(3)          <---------O2<---------MYB52(1)          <-----------GT1   <---------ARR11(3)   ------->GAMYB          <---------TGA1a <---------MYB52(1)   <---------ICU4       --------->ARR14(2) <---------At4g35610      <------ZmHOX2a(1) --------->MYB52(2)   <---------TOE2(3)      <---------ARR14(2) --------->At4g35610 ===================MYC_MYB      <---------HSFB2a(2)      <---------At4g35610--------->MYB52(1)    <- ===================MYC_MYB  <-------GAMYB <---------AHL20(2)       --------->AGP1<---------ARR14(2) --------WOX13(1)   <---------ZAT6        <---------AHL20(2)    --------->YAB1<---------LBD16    ---- ----------CBF    <---------At5g28300     --------->AHL20(2)   <---------ATHB12   --------->ARR14(2) ----->ATHB12 <---------ZAT6--------->MYB52(2)--------->ICU4 --------->WOX13(1) --------->LBD16 <----   gattgctaggacacgagtgttactgttagttagttgtggaagaatttaatgtttaccttcagccaattaagatccaaccctccggattcaactgcattgt  2665000                   <---------AHL20(2)        <---------YAB1        <---------AHL20(2)       --------->AHL20(2)       <---------AHL20(1)                                              ---------->DOF2       --------->YAB1  <-----------GT1                              --------->AHL20(2) --------MYB59     --------->AHL20(2)   <-----------GT1        <---------ATHB12 --->TEIL   <-----------GT1          <----------DOF2   <---------CCA1(2)              <---------AHL20(2) -----CCA1(2)  <----------DOF2 <-----------GT1      <-------TEIL    --------->YAB1    --------->AHL20(2)   atctaacaatattatttctttttaattacattttttcttctttaactatccaaattcatctcttaatcaataaaaaaggcctactaaattaaacactgat  2665100                                                                             <---------ANAC58                      ---------->DOF2                  <------ZmHOX2a(1)     <---------ANAC58         --------->YAB1    ---------->DOF2          --------->CCA1(2)  --------->AHL20(2)          <- ------>MYB83     ----------->GT1---------->DOF2 <---------TOE2(3)     <---------AHL20(2)          -- ------>MYB46(1)  <---------MYB46(3)             <---------YAB1  ----------->GT1               ------   accaactacaatgagaagagttgttaaagaaaagaaaaagactaatagattaagataggaatttggatagtatttaatttcttactggtttgaaatgctg  2665200               --------->ATHB12   <---------AHL20(2)                      --------->GLK1(1)              <---------YAB1     --------->AHL20(2)                       <---------GLK1(1)          <---------ZAT6      --------->YAB1                        ---------->DOF2 --------AHL20(2)  <---------AHL20(2)                            --------->AHL20(2) ------->AHL20(2) --------->AHL20(2)                      ----------->HVH21                   <------ ----->GT1<---------ANAC46   <---------YAB1             <----------DOF2 <------ZmHOX2a(1)  <---------   tttaattcagtagtgtatgatttaatgcctgattataaaattcaaagttttaaaactgctttgacaaataaaaaggatttcagttctcatctacatatat  2665300  Previous    Next  AGI:  At3g08770.1    Description:  LTP6 (Lipid transfer protein 6); lipid binding. Identical to Non-specific lipid-transfer protein 6 precursor (LTP6) [Arabidopsis Thaliana] (GB:Q9LDB4); similar to lipid transfer protein, putative [Arabidopsis thaliana] (TAIR:AT5G01870.1); similar to lipid transfer protein precursor [Davidia involucrata] (GB:AAL27855.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); cont Range:  from: 2664145    to: 2664834    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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