Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <----------ID1         <---------AHL20(2)           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <--     ---------->DOF2          <---------ICU4              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------  ----------->GT1          --------->YAB1       <-------TEIL<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<------ --------->MYB59          <---------ATHB51  <-------TEIL  <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<-------- ---->AHL20(2)          --------->YAB1<------ZmHOX2a(1)  <------------------------ANAC81    <--------HAHB4 -----AHL20(2)       ------->GAMYB <---------LBD16      <---------AHL20(2)                  --------- --->AHL20(2)     --------->MYB52(1)--------->LBD16  <---------ARR11(3)                    <---------YAB1   aattcggtaaagacaagagacaacgacaataataaatccaggaaaatacatccatgattttttttttttttttttttttttgtaaatcgcattatcatta  2660500                                                                                          <------ZmHOX2a(1)                                                                                          ===========     <---------CCA1(1)                                                                   <---------YAB1     <---------RVE1(1)                                                                  <---------TOE1(2)    <---------ARR11(3)                                                                  <---------TOE2(2)    --------->ARR11(3)                                                                  <---------TOE2(3) >ATHB12                                                                           --------->ARR11(3) -------ZAT6                        <----------DOF2           --------->YAB1       --------->GLK1(2) ->TOE2(3)           <---------ARR11(3)               ----------->GT1              <-----------ARR10 ---YAB1             --------->AHL20(1)        <---------At4g35610                 <---------ARR11(3) -ICU4               <---------AHL20(1)        --------->At4g35610         <---------AHL20(2)   ===== >YAB1   <-----------GT1         <-----------GT1    <---------WOX13(1)     --------->AHL20(2)   <----   gagatagatattttcaatttcaaaatattcaaatttcacttttgaactgagctaattggtgaaatcagagttgtcatttaaacaaaatcttaggatagat  2660600          ------>ZmHOX2a(1)         --------->TOE1(2)                                         ----------->GT1         --------->TOE2(2)                                        --------->HSFB2a(2) <-----------ARR10                     --------->ANAC58           --------->HSFC1(1) <---------ARR11(3)                    --------->ANAC58           <---------HSFB2a(2) --------->ARR11(3)                    ----------->GT1    --------->ARR14(2) --------->GLK1(2)                 ----------->GT1     --------->ANAC58 ==HOX2a_HOX2a                    <---------------AtSPL8  <---------ARR14(2) ================HOX2a_HOX2a      --------->DAG2       --------->ANAC58       ---------->DOF2      -- --ZmHOX2a(2)                   ---------->DOF2        --------->ANAC46     --------->YAB1       ----   caaaatctattcctgcgaaaattcacaaaaaaaaaaaaggtaagaaaaaacaaaaacacgaattcgatctagaaaaaatcaaaagcagacataagagaga  2660700                         --------->ANAC58               <---------LBD16             <---------LBD16---------->DOF2--------->ANAC58             --------->TOE1(2)             --------->ANAC58   <---------ICU4        --------->ANAC58<------ZmHOX2a(1)  --------->ICU4   --------->MYB46(3) <---------HSFB2a(2)            <---------REM1(1)      --------- ------->AHL20(2)  --------->DEAR3(2) --------->HSFB2a(2)   <---------ARR14(2)            ---------->DOF2 ------->GT1----------->RAV1(2)    --------->GLK1(2)   --------->MYB52(1)               ----------->HVH21   agtaattagttcaaacctggaacagacaagaaaagaaattctaggacgaaactgaaactacggatagagagttgtaagagagagggagatgtgaaagtga  2660800                                         <------ZmHOX2a(1)                   <------ZmHOX2a(1)    ----------->GT1                            --------->ARR11(3)          <---------HSFB2a(2)         <------ZmHOX2a(1)                           <---------RVE1(1)          --------->HSFB2a(2)       --------->ALFIN1                     ---------->DOF2     --------->HSFC1(2)            <------ZmHOX2a(1)           ======================================     --------->HSFB2a(1)         --------->ALFIN1              <-----------------AG<---------ARR11(3)     <---------HSFC1(2)         <------ZmHOX2a(1)              --------------->AGL15     <---------HSFB2a(1)      --------->ALFIN1        --------->DAG2    <------ZmHOX2a(1) -->GT1  <---------LBD16     <------ZmHOX2a(1)    --------->YAB1      <---------TOE2(3)        *TSS   aatcggaaatttctgggatgaggaaggaagaggaggaggaggaggagaaaactcataaggggtctctctgtttaggaaagtgagagattttagagagaga  2660900                                                                               <---------ZAT6                                                                              <---------YAB1                                                                         -------->HAHB4                                                                         <---------AHL20(2)                   ---------->DOF2                                       --------->ATHB12                ----------------->AGL3                                   -------->ATHB1                ----------------->AG                                     <---------ICU4               --------->ANAC58                                       --------->YAB1               --------->ANAC58                                       <---------ICU4              --------->PCF2               --------->ANAC58          --------->ICU4 <---------ANAC55(2)             <---------PCF2              ---------->DOF2             <---------AHL20(2)             --------->TCP15(1)   ---------->DOF2                    --------->AHL20(2)             --------->TCP20     <---------WRKY38(1)  <---------GLK1(1)  --------->YAB1            <---------TCP23      <---------WRKY45     --------->GLK1(1)  <--------HAHB4            <---------TCP15(2)   <---------WRKY12    --------->ARR14(2)  --------->ATHB51            ----------->HVH21   --------->WRKY18(1)  <---------ARR11(3) --------->ICU4          --------->ALFIN1    <---------MYB46(3)     --------->ARR11(3) <---------ATHB51        --------->ALFIN1     --------->ALFIN1        <---------ARR14(2) <---------YAB1 =================================MADS_MADS--------->ANAC58---------->DOF2 <---------YAB1   agagagagaagggtgggacccaaaagaggcagtggtcaaagttcaaagcaaaacagatatccaaagatgtattaattattagtattacttaaactctctc  2661000                                                                <----------DOF2                                                                <---------DAG2                                                               <---------ANAC58                                                               <---------ANAC58                                                           <----------DOF2                                                 --------->HSFB2a(1)                                    <----------DOF2<-----------GT1                         <----------DOF2         <---------HSFB2a(1)               ------>NtERF2            --------->YAB1    <---------At4g35610<---------HSFC1(2)               --------->DEAR3(1)            --------->TOE2(3) --------->At4g35610--------->HSFC1(2)         <----------DOF2<---------   tcccagtctctcaatcttaattcaattctttcagctaacttttagtttggaattttctctactttgctttttattcttctttcgccccctctacttttgt  2661100                                               <---------DEAR3(2)                                               ------>NtERF2                                              <---------DEAR3(1)                                              <---------RAP2.3(2)                                             --------->RAP2.6(3)                                            <---------ATERF1(1)                                           <---------DEAR3(1)                                           ----------->HVH21                 <-----------TGA1         --------->SPL7    --------->ARR11(3)                 <-----------HVH21        --------->ATERF1(1) --------->TOE2(3)                --------->bZIP60(2) --------->DAG2          --------->GLK1(2)                   <----                --------->ANAC46   ---------->DOF2          <---------ARR11(3) ----------->GT1 ------ -DOF2          --------->O2  --------->AHL20(2)--------->At4g35610         <---------TOE2(3)  <-----   tttcttctctctacaacctcgtcacaaactcataaaataaaggggacgacggctcaagagaaaatctcaaaatgtattaatgtgtaacatgttccaatat  2661200                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 ----     --------->ATHB51                                                                       <--------     --------->ATHB12                                                                       ---------    <---------YAB1                                                                       <---------AHL20(2) --------->AHL20(2)                              <---------YAB1                          <---------ARR11(3) <---------AHL20(1)                            --------->YAB1        <---------YAB1      --------->AHL20(1) --------->AHL20(1)       ----------->GT1     --------->ICU4  <---------ANAC55(2)        <---------AHL20(1) <---------AHL20(2) <----------DOF2      <-----------GT1      --------->ANAC55(2)        --------->AHL20(2) -----YAB1       <-----------GT1    <---------ICU4  <---------ANAC55(2)                  --------->ARR11(3) --->ARR11(3)--------->ARR11(3)  --------->YAB1<---------ICU4<-------TEIL   <---------AHL20(2)------- ----ARR11(3)<---------ARR11(3) --------->AHL20(2)  ----------->GT1<-----------GT1  --------->MYB46(3)   cattttattattggagatttttctttgtttgtaaataaaaatttcacaattatcatgtaaaaatacatattaccatttttaatctaaccaatatattaat  2661300                                                                                       --------->AHL20(2)                                                                                  <---------AHL20(1)                                                                                  --------->AHL20(2)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                              <--------ATHB1                                                                              --------->YAB1                                                                              <---------ICU4        -                                                                              --------->AHL20(2)    <    --------->AHL20(2)                                                        <---------AHL20(2)-----    <---------AHL20(2)                                                        <---------AHL20(1)<---- -------TOE2(3)                                                              --------->ICU4    ------ --------GT1                                       <---------YAB1            <---------YAB1 --------- ----->MYB52(1)          ---------->ID1      <---------TOE2(3)             --------->YAB1   <-------- ----->YAB1    >>>>>>>>>ARR1              <---------AHL20(2)              <---------YAB1   <---------AHL20(2) -AHL20(2)     >>>>>>>>>ARR2             --------->YAB1              <---------ARR11(3)<---------AHL20(1) >AHL20(2)   <---------YAB1           --------->AHL20(2)             --------->ARR11(3)<---------AHL20(2) -->YAB1   <-----------GT1            <---------AHL20(2)     <---------AHL20(2)  <---------AHL20(2) <   aacgatttaaattatacgattgtatttgtcgattagtgatttatattaatgttatcagtgtatatttttaaaatctataataattttattttatttattt  2661400  Previous    Next  AGI:  At3g08760.1    Description:  ATSIK; kinase. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G15080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48870.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 2657924    to: 2660895    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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