Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->At4g35610   --------->ZAT14                                                                         <---------HSFB2a(1)   <---------ZAT14                                              --------------->AGL15      --------->HSFB2a(1)   <---------ZAT18                <-----------GT1               ===================================== --------->At4g35610           --------->YAB1          <-----------TGA1   <---------ARR14(2)  ------>MYB83 <---------At4g35610          <---------YAB1          --------->YAB1      --------->ARR14(2)  ------>MYB46(1)   ctcagtagactagtaagtagctaagtggaagcattataaccaaaacaatgcttaaatcgtcatgaactagtaatagtatctacaaattcagaaaccttcc  2655800                    --------->TOE2(3)              --------->YAB1                >>>>>>>>>TBF1   --------->ANAC46          ----------->GT1                <---------------------WRI1   --------------->AGL15                <------ZmHOX2a(1)   --------->ANAC55(1)  ----------------->AGL3              <---------TOE2(3)     --------->ANAC58                      <-- ===================MADS_MADS   <------ZmHOX2a(1)           --------->ANAC58             <---------MYB46(3)   aagttccaagtatagataataacataaactaagaggaattgaggaagaagaataccaagaacacgccaaggagcaccatcgacttcgatattggttcccg  2655900                             --------->ARR14(2)                         --------->At5g28300                        ----------->GT1         ------->MYC3                      --------->ZAT14           <-------MYC3                      <---------ZAT14          <---------TGA1a                             ----------                   ---------->DOF2             <---------O2                               --------->AHL20(2)           <---------At4g35610                 --------->TGA1a                            <---------AHL20(2)           --------->At4g35610    --------->AtLEC2         --------->AHL20(2)     ------->TEIL        <---------MYB52(1)   <---------ARR14(2)--------->O2<---------AHL20(2)  --------->ANAC58 --------DOF2      ======================================bZIP_DOF              --------->ANAC58   ctttgatgtcgttagcagacatagagcagtgaatccctgcaaaaatcaaacgtgtctgaatataaatttcaaaatcaatgcatgcatcgaatttaaagaa  2656000                                                        <---------ATERF1(1)                                                     <------NtERF2                                                     --------->ALFIN1                                                    ------>NtERF2                                                   --------->ALFIN1                                                   <---------ANAC46                                                   <---------DEAR3(1)                                  --------->LBD16 <---------LBD16                                 <---------HSFB2a(2)<---------MYB46(3)                                 --------->HSFB2a(2)--------->LBD16                                 <---------LBD16  <------NtERF2                                <---------ANAC46  --------->ATERF1(1)                                <---------LBD16  <---------RAP2.3(1)                            <---------DEAR3(2)   <---------DEAR4(2)                            <------MYB83        <---------DEAR3(1)                            <---------MYB46(3) --------->SPL7                        <-----------RAV1(1)    --------->RAP2.6(3)                     <---------ARR14(2)      <---------SPL7                     --------->GLK1(2)   --------->ARR14(2)             <---------------------WRI1                     --------->ARR14(2)  <---------ARR14(2)----------->RAV1(1)                    --------->GLK1(1)   <---------GLK1(1) --------->ANAC58                    <---------GLK1(1)   --------->GLK1(1)--------->At4g35610        <---------RVE1(1)   <------MYB46(1)<---------LBD16--------->ANAC58       <---------ARR11(3)   --------->MYB55(2)<---------SPL1(1)      <-------TEIL               ----- >DOF2 --------->ARR11(3) <---------MYB52(1) --------->LBD16 <-----------RAV1(2)         --------->At4g35610   gcgaatagagatattaactgggaaatctgttggttcggggagaaatccggacggcggggagcgccagtcgattcatcgatgaaaacgaagcagttgaata  2656100                                                                             --------->AHL20(2)                                                                           ----------->GT1                                                                         <---------ANAC46                                                                        --------->ATERF1(1)                                                                        <------NtERF2                                                                       --------->LBD16                                                                       ------>NtERF2                                                                       <---------ATERF1(1)                                                                      --------->RAP2.3(2)                                                                      --------->ATERF1(2)                                                                      <---------DEAR3(1)                                                                      --------->DEAR3(1)                                                                      <---------ATERF1(2)        --------->ANAC46                                             --------->RAP2.3(1)        --------->ANAC58      --------->CCA1(2)                      --------->ORA47(2)            --        --------->ANAC58     --------->ARR14(2)     --------->LBD16  --------->ERF1                --   <-------TEIL              <---------ARR11(3)     ------>NtERF2    --------->ATERF1(1)           <-  --------->CCA1(2)          <---------ARR14(2)    --------->ANAC58  <---------LBD16            ----- --------->ARR14(2)          --------->ARR11(3)    --------->ANAC46 ------>NtERF2             <------ <---------ARR14(2)--------->At4g35610             --------->ANAC58 <---------ATERF1(1)       ------- ---->MYB52(1)<------ZmHOX2a(1)<-------TEIL       <---------LBD16   --------->LBD16 <---------GLK1(2)   agggatacacaaggaaggagtagatgaacaagatacagagaaaatcgctcttcccgccattttgttcttccgccggcgagtaaatagagtctcgctgtgt  2656200                                                    <---------RAP2.3(2)                                                    --------->ANAC46                            <----                                                   <---------At5g28300                         ------                                                   <---------LBD16                          ---------                                             <------MYB83                                  ------>MYB83                                             <---------HSFB2a(1)                 ----------->RAV1(1)                                             <------MYB46(1)                    --------->MYB46(3)                                             --------->HSFB2a(1)               ------>MYB83------>MYB46(1) ------->ZAT18         ---------->DOF2       ----------->GT1                   ------>MYB46(1)------- ------->ZAT14   --------->ICU4         --------->ANAC58           <----------DOF2       <---------MYB59 --------ZAT14   ------>ZmHOX2a(1)      --------->ANAC58        ------->TEIL  ----------->RAV1(1) ---->ALFIN1 --------->ARR11(3)       <------ZmHOX2a(1) ------------>CBF     --------->AtMYB61------- ---ANAC46 --------->MYB59         <------ZmHOX2a(1)<---------RAP2.6(2)   --------->ANAC46 --------->MYB52(1) -->ALFIN1 --------->DAG2  <------ZmHOX2a(1) *TSS <-----------GT1 --------->TOE2(3)   --------->MYB52(1)   gtggactgtggataaggtcctgatggaaaggactcgaggaggacggaaggttttacggctcaatcgaacctttatcacaccaacaacaaaaccgaaccgt  2656300                                                                                                    <     ------------>CBF                                                                            ---- --------->MYB59                                                                           ------>ZmHOX2a(1) -----MYB52(1)      --------->LBD16                               --------->YAB1          <---------- --->At5g28300    <---------LBD16     <---------At4g35610        <---------ATHB12         --------->TOE2(3) >SPL7          <-----------GT1  <----------DOF2               --------->WOX13(1)         ----------- ---->GT1 ------------>CBF    --------->ANAC58    --------------->AtSPL8                 ------------ -->TOE2(3)   <---------ATHB12--------->ANAC58    <---------------AtSPL8               <-----------GT1   aattcggttcaattcaattatccggtttacatacgcttttatctgattttttagagtaccaattccaatcaaatgccattagatgtttttttcctcaaat  2656400      <---------AHL20(2)                                                                  <---------YAB1      --------->AHL20(2)                                                                -------->HAHB4      <---------AHL20(1)                                                               --------->ICU4 <-------TEIL                                                                          <---------YAB1 -----------GT1                                                                      --------->YAB1 ------->GT1               ------->MYC3                                        <---------LBD16 -----AGL15                <-------MYC3                                    <---------ARR11(3) ---->AGL15              ------->TEIL                                      --------->ARR11(3) ----->AGL3          ------->TEIL   <---------ATHB12                     --------->MYB59--------->YAB1   agttacattttattttttatatgtatgcacatgaacaaatcaattgaaatgttagatttgttcattgtaaatgtttaggtcttcggataatgatgcttag  2656500                                      --------->TOE2(3)                                      --------->TOE1(3)                                   ------>MYB46(1)                 <---------YAB1  <---------MYB111(1)               <---------At4g35610 ------>MYB83        --------->CCA1(2)        <---------MYB59       --------->ARR11(3)        <---------MYB46(2)       <---------ARR11(3)        --------->MYB46(3)    <---------------AGL15        --------->AtMYB61                    --------->AtMYB61    --------------->AGL15    --------->ZAT14                         ----------------->AGL2   <-----------------AGL3  --------------->AtSPL8         <---------ICU4   ttttagcaatatatggaagatgatacaactctgtaccaaacctaaaacttctcaagctcataaatacaaaaaccaaaaccagaagtcaatttcaataacc  2656600                                                                                    <---------CCA1(2)                                                                      --------->ANAC58                                       ---------->DOF2                --------->ANAC55(1)                                  ------>MYB46(1)                     --------->ANAC46                                  ------>MYB83                        --------->ANAC55(2)               ------->TEIL     --------->MYB46(3)                    --------->ANAC58               <-------TEIL     <---------MYB46(2)                    <---------ANAC55(2)  --------->MYB52(2)        <------ZmHOX2a(2)               <----------DOF2       --------->YAB1  <<<   tagttcgtttcaatatgtacatggtagacgatcaccaaacacaaagccaaacaaaaccctagctttaagaacacgaaacaacactcatatcgctaactat  2656700  Previous    Next  AGI:  At3g08740.1    Description:  elongation factor P (EF-P) family protein. similar to elongation factor P (EF-P) family protein [Arabidopsis thaliana] (TAIR:AT4G26310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48872.1); contains InterPro domain Translation elongation factor P/YeiP, central; (InterPro:IPR001059); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain Translation elongation factor, KOW-like (InterPro:IPR013185); contains InterPro domain Translation elongation factor P/YeiP, conserved site (InterPro:IPR013852); contains InterPro domain Translation protein SH3-like, subgroup (InterPro:IPR014722); Range:  from: 2654632    to: 2656245    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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