Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                       --------->ZAT18                                                       <-------                       <---------ZAT18                                                ----------->GT1           <---------ANAC58                               <---------YAB1              --------->TOE1(1)           <---------ANAC58                               <---------AHL20(2)      -------->P --------         <-----------GT1       --------->YAB1<-----------GT1                     ------->GAMYB<------    <----------DOF2    <---------ZAT14      <-----------GT1--------->ATHB12     <---------MYB111(2) ------At4g35610       --------->ZAT14<---------YAB1     --------->AHL20(2)     <---------MYB55(2)  < ----->At4g35610  <---------ZAT14 <---------GLK1(2)      <---------AHL20(2)     --------->MYB46(3)---   gctgctcttttttacttgtcttcagtgctctgatcatattcttatttttccaattccattttaattggaaactgctattgcaacaacctcgtaaattttt  2644800                                                --------->TOE2(3)                                                <----------DOF2                                               <---------ICU4 --------GT1                                 --------->GLK1(2) --AHL20(2)                                <---------ATHB12 ->AHL20(2)                  <----------DOF2--------->YAB1 ---AHL20(2)         <----------DOF2   <---------ATHB12            <---------AHL20(2) ----------DOF2   ----------->GT1 <---------MYB59         <----------DOF2                         --- ------->ID1   <---------GLK1(2)  --------->TOE2(3)     ------>ZmHOX2a(1)                --------->ZAT6   ttcttttttaaactatagaatcgttttaagtctttacctaaatcaataatctttaatcctctttagtattttttttttgagcatcaactaaacactatgg  2644900                                                                      ----------->GT1               <                                                                      XXXXXXXXXXXXXXXXXXX>MIR156H   -                                                                   ----------->RAV1(1)              -                                                                   <---------RAP2.6(3)     <---------                                                                   ------>NtERF2           --------->GLK1(2)                                                                  --------->ETT(2)         <---------ARR14(2)                                                                  --------->ATERF1(2)     --------->GLK1(1)                                                             --------->At4g35610<---------------AtSPL3                     --------->DAG2                    --------->GLK1(2)        <---------------AtSPL8                    ---------->DOF2                   <---------GLK1(2)        ---------->DOF2     <-                 --------->YAB1             --------->YAB1   <---------At4g35610--------->DAG2 ------          ------->GAMYB        <----------DOF2    <---------ZAT14 <---------ATERF1(2)     <---------CCA1(2) ------->DOF2   <---------AHL20(2)--------->YAB1  --------->ZAT14 <---------ETT(1)     --------->LBD16   caaagtcttcaaccgtatataataaagtcaattctttaataaacaatggtactgcagaatttgagttgccgacagaaaaaaaaaagtaccgcaaatctaa  2645000                                                     --------->ANAC58                                                     --------->ANAC58                <-------GAMYB                --------->AHL20(2)         <---------------AtSPL3             <---------YAB1         <---------------AtSPL8          <---------AHL20(2) ---------ARR14(2)                       <---------YAB1 -------->ARR14(2)                   <---------RVE1(1) -------->GLK1(2)     --------->YAB1--------->ARR11(3)                                         ------ --ARR10---------->DOF2             <---------ARR11(3)                       ------------------------ --------GLK1(2)--------->At5g28300 <---------GLK1(2)--------->ANAC46        ----------->GT1  ------- ---->DOF2     ----------->GT1 --------->MYB52(1)<-----------GT1     ---------->DOF2<----------ID1   agaatctgttgaaagtacggttaataataaacaaaacagattttttattatttacacgaattgatagctaataaagagtgagaaaaaaaacaaaaaaaaa  2645100                                                                                               <-----                                                                                  <---------HSFB2a(1)                                                                      <---------YAB1           ------                                                                  --------->At5g28300         -------                                                              <---------ANAC46    <---------ZAT2 ----                             --------->At5g28300           ----------->HVH21      --------->HSFC1(2)                            ----------->GT1                ----------->TGA1       --------->At4g35610                         <---------ANAC46              <---------ANAC58           <---------HSFC1(2)                 <XXXXXXXXXXXXXXXXXXXMIR394A/B         <---------ANAC58<---------ICU4        -------- --->DAG2        <------ZmHOX2a(1)                    --------->MYB59 --------->ICU4       ---------- >ANAC81       --------->ALFIN1                    <------------CBF --------->YAB1--------->HSFB2a(1) --->DOF2     <------ZmHOX2a(1)               ----------->GT1 <---------bZIP60(2) <---------At4g35610   gtggaatggacagagaggaggagggtagagtggtaaatttagtaagaaggggaaattgggtctgacgcggtcataatgggagggagcttcttctccaatc  2645200                                         <---------ANAC46                                        <------NtERF2 <---------GLK1(2)                     ------>NtERF2 *TSS                                 <---------DEAR3(1) ----ATHB12                          --------->ATERF1(1) --->MYB46(3)                       ------>NtERF2 -->ANAC46    <------MYB46(1)       <---------ATERF1(1) ----->MYB52(1)                    --------->DEAR3(1) ->WOX13(1)   <------MYB83         ----------->HVH21                        --------->YAB1 -->CBF      --------->MYB59    --------->ANAC46<----------DOF2<---------ETT(2)                 -----   aacgattcttctaatttggtctcttccctcaaacacgacgacggcgttttctttcatttcttctctcgacaatccctaacatcaccagaagaacacaaac  2645300               ----------->RAV1(1)              --------->REM1(1)         <---------TOE2(3)         --------------->AtSPL8         --------------->AtSPL3                                                               -------         --------->MYB59                                                        <-----------GT1     <         <---------------AtSPL8                                             <----------DOF2   <------    <----------DOF2   <---------GLK1(2)                                --------->YAB1        <------- ---->YAB1   <-------TEIL                           <-----------GT1   <---------YAB1       ------>ZmHOX2a(2)   acaattctttttaggtacaacacaaattctcttcttccttcttcgctctaaaattttcaacacatattttttatgatgcttttaagcgtctgatcgtatc  2645400                                                                             <---------YAB1                                                                          <---------MYB52(1)                                 --------->GLK1(2)                       <-------GAMYB                                --------->ARR14(2)                      --------->MYB52(2)        ---------->DOF2         <---------GLK1(2)                   --------->MYB52(2) ------>ZmHOX2a(2)       <----------DOF2                            <---------MYB46(3) -->ARR14(2)            <---------DAG2         <---------ARR14(2)  <---------TOE1(2) ------ZmHOX2a(2)    <-----------GT1           --------->ARR14(2) <---------MYB52(1)   ---------->ID1 ---ARR14(2)     <---------MYB52(1)           <---------MYB52(1)<---------ANAC58    <----------DOF2 --CCA1(2)    <-------TEIL      <---------ARR14(2) <<<<<<<<<TBF1<---------ANAC58    ------>ZmHOX2a(1)   cgatctctcttaaaggtccgtttttgccttttcagattctcttaatccgtttcttcttctcaattttcgtttgttcgttattaatccttttcgcaattcg  2645500                                                                                   <------ZmHOX2a(1)                            --------->LBD16                                 --------->GLK1(1)      <-                            --------->ANAC46                         <---------ARR14(2)            --                 <---------DAG2                                 --------->AtLEC2  --------->ANAC46---                 <----------DOF2  ----------->GT1               --------->ANAC58 --------->LBD16  ---                <---------DAG2  --------->GLK1(1)               --------->ANAC58--------->HSFB2a(2)<-          <-----------GT1  --------->LBD16              --------------->AGL15   <---------LBD16  <--- --------->At4g35610      <-----------RAV1(2)        <-----------GT1 --------->ARR14(2)--------->AtLEC2 <---------At4g35610      <---------LBD16  --------->AHL20(2)   --------->ANAC46<---------HSFB2a(2)--   attagctgaaagtttcccccttttttctccagggaattgcaaaaaaaaaatcgattttctattttcaggcaaattcgaatttccaggacattcaaatggg  2645600           <---------TOE2(3)   <---------ANAC46   <---------ANAC58                                                         <-------GAMYB   <---------ANAC58                                                        <------MYB46(1)  <-------TEIL                                                         <---------MYB46(3) --------ZAT2                                                 --------->GLK1(2) ------->ZAT2--------->ARR11(3)                              <---------GLK1(2) ------>MYB111(1)         --------->ANAC58                   --------->ARR14(2)       --------->YAB1 ------>MYB52(2)          --------->ANAC58                   <---------ARR14(2)      <---------YAB1 --------At4g35610      --------->MYB52(1)<------MYB46(1) --------->ETT(1) <------MYB83 -----P    <---------TOE1(3)              <------MYB83   ---------->ID1<-----------RAV1(1) ---------- ------->At4g35610 ---------->DOF2<----------DOF2      <-----------RAV1(1) <---------MYB46(3)    ----   tagctgcgtctctaaggtattgaaagaaacgaaacccttttgtttggtttttggtttttgtcggattctgtatttgttggttatgcgatgataatgtaaa  2645700  Previous    Next  AGI:  At3g08710.1    Description:  ATH9 (thioredoxin H-type 9); thiol-disulfide exchange intermediate. similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT2G40790.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18319.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 2645201    to: 2646503    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version