Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ARR11(1)                            <---------CCA1(2)      <---------ARR11(3)                          --------->YAB1           <---------ARR14(2)                         <---------YAB1            --------->ARR11(3)                        --------->ARR11(3)        --------->CCA1(1)                               <--                        <---------ARR11(3)        --------->RVE1(1)                            <-----                 <---------TOE2(3)              --------->YAB1 ------>MYB46(1)                 <-----           --------------->AGL15                <---------GLK1(2)                              ------           <---------------AGL15         ------>MYB83          ------>MYB83                   <------          <-----------------AGL2         ------>MYB46(1)     --------->AtMYB61          --------->AHL20(2)    <---------YAB1 <------ZmHOX2a(1)   <---------MYB59<----------DOF2            <---------HSFB2a(2) -GT1     <-----------------AG         --------->AtMYB61     <---------MYB59     --------->HSFB2a(2)   ttgtttacaatagctgttttaggaaatatcatatctatagaccaaaccaagaatatctttagaccaaaccaagaataggtgttttagaaaataaacatat  2643100                                                               ----------->RAV1(1)                                                               ------>NtERF2                                --------->TCP15(1)            <---------ETT(1)                                <---------PCF2                --------->ETT(2)                         ------>NtERF2                        <---------ATERF1(2)                         --------->LBD16                      --------->ATERF1(2)  <---------ANAC58      --------->ANAC58                 <---------ANAC58  <---------ANAC58      --------->RAP2.6(2)              <---------ANAC58   <---------HSFC1(2)  <-------GAMYB         ------->GAMYB                   --------->MYB52(2)  --------->HSFC1(2) <---------MYB46(3)     --------->ANAC58              --------->At5g28300   <---------HSFB2a(1) --------DOF2           --------->ANAC46              <------NtERF2      --------->At4g35610 ----ARR11(3)          --------->MYB46(3)           <---------DEAR3(1) --------->YAB1    ------------ ----ARR11(1)         --------->At4g35610       ===========================RAV           <---------ANAC46 --->ARR11(3)     --------->ARR11(3)            <-----------RAV1(2)  --------->GLK1(2)   <---------ANAC58 ---CCA1(2)       <---------ARR11(3)          <-----------HVH21<---------RAP2.6(3)       <---------ANAC58   ctttggttgcaattttccaatatcatccgccatgggtccctactaataggtcaggcggtacttgccgacagaatcagaagcctcgagactgacttgtatt  2643200                                         ------->TEIL                                   <-----------RAV1(1)                                         <-----------ARR10                              ------>ZmHOX2a(1)                                         --------->GLK1(2)                             --------------                                        <---------GLK1(2)                             <--------------                                      --------->ANAC46                                ===============          ---------->DOF2             --------->ANAC58                                ----------->RAV1(2)       --------->YAB1                 --------->ANAC58                         ------------>CBF      ----------->TBP               <-----------GT1             <---------ANAC46      <-------------- ------>NtERF2                  <----------DOF2      <----------DOF2     ---------->DOF2============= --------->WRI1          ----------------------->TaNAC69(2)   <---------ZAT18  <-------TEIL  <-------   ctccgactataaaaaagaagtagagggttttaggcttttcacgaatctcttctctcttttgtagtggccttgaaaaaaagattcaatctcctgttgtggt  2643300                                                                               <------------CBF                                                                           ------->TEIL                                                                           <---------TOE2(2)                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC55(1)                                                                   <---------ANAC58                                                                   <---------ANAC58                      <---------MYB52(1)                           <---------ANAC55(2)    <----------DOF2  <----------DOF2                               --------->ANAC55(2) ->AGL15             <---------DAG2                                --------->ANAC46 ---AGL1            --------->TOE2(3)                     <---------ICU4--------->ANAC55(2) ===========================================================MADS_MADS<---------MYB52(1) ---AG          <----------DOF2                           --------->YAB1<---------ANAC46 =================HOX2a_HOX2a                            <---------YAB1 <---------ANAC55(2)       --- --AtMYB61 ------>ZmHOX2a(2)                --------------->AGL15 <---------TOE2(3)  <---------AHL20(2)   atgtttcttttgatccatctttcctttatgttttctgtttcaactacttcttagggtttatcatcacttacgttacgtatgtattgttttattcgtcttc  2643400                                                                <---------TOE2(2)                                                  <---------ANAC58                                             --------->ALFIN1  <-----------RAV1(2)                                             ==============================RAV                                             <-----------RAV1(1)<---------TOE1(2)                                           <---------ANAC58   <------NtERF2                                           <---------ANAC58   <---------At4g35610                                       <------------CBF       --------->LBD16                                      <---------ICU4      <---------SPL7                            <                                     <---------YAB1 <---------CCA1(2)                               -                              ------>ZmHOX2a(1)   <---------ANAC58                      <---------ANAC58   --------->YAB1            --------->TOE2(3)    <---------ANAC46                      <---------ANAC46  <---------YAB1             --------->TOE1(3)<-------GAMYB --------->SPL7              <---------ANAC58 --->ZmHOX2a(1)          <---------GLK1(1) <---------ANAC46 <---------LBD16    ---------->DOF2    <--   ctctatgatatgttatgttcttagttgaattccttaatactcattgtgtgttgcttatctcgtccgcaggttttcgagtctaaaagcatggcttctaaga  2643500                                                    <---------TOE2(2)                                                    <---------TOE1(2)                   --------->GLK1(1)             <---------ANAC46                   --------->CCA1(2)         <---------ZAT14        <---------ANAC58             --------->MYB52(1)          --------->MYB52(1)         <---------ANAC58          <---------At4g35610           --------->ZAT14         <----------DOF2          --------->At4g35610           <---------ZAT14         <---------DAG2              <-------TEIL        --------->ZAT18           ------>ZmHOX2a(1)<-----------RAV1(2)                    <---------GLK1(2) ---------GLK1(1)  <---------GLK1(1)  <---------At4g35610      <---------DAG2          <---------WOX13(1) -------->GLK1(1) <---------ARR14(2) --------->ANAC58--------->ANAC58              <---------WOX13(1) ----ZmHOX2a(1)   --------->ARR14(2) --------->ANAC58--------->ANAC58           <---------YAB1 ------   ggatttcaagggaactgagggatatgcagagacatcctccagcaaactgtagcgcaggtaatctcccttttcttggctgattttgactgatagattcaca  2643600                                              <<<<<<<<<GATA-1                         --------->ATHB12                                              <<<<<<<<<GATA-2                        <---------YAB1            <---------TOE2(3)   <----------DOF2      --------->AHL20(2)         --------->ANAC58       <----------DOF2     <-----------GT1    <<<<<<<<<GATA-4                   --------->ZAT6       <---------DAG2    <-----------HVH21  --------->WOX13(1)                  --------->ANAC58 --->ZAT6   <---------TOE1(3)<---------ALFIN1 <<<<<<<<<GATA-3                 <---------DOF5.7(2)   ctaaaaacacttttagggtttgatatatgtcacacttttatttcatcaatccacattatatgtttctgagttttttttggtaacgctatgatttgttaga  2643700                                                                                          --------->SPL7                                                                                        <---------SPL7                                                                                    <---------ANAC58                                                                               --------->TOE2(3) <---                                                                            <-----------GT1<---------YAB1            <---------MYB52(1)        <----------DOF2                  ----------->GT1<--------------          ----------->GT1     <---------AtLEC2                --------->HSFB2a(2)   <---------AtLEC2    <---------TOE1(2)   ------->TEIL <---------DAG2           <---------HSFC1(1)    ----------->RAV1(2)  <----------DOF2<---------AHL20(2)------->TEIL               <---------HSFB2a(2)   <---------ANAC58<   ctctctttggttctgttatatatatgtactctgcatgaaccttttttttttttttttttgtattcgagaaaactcgttaaacctttgcctggtacgatta  2643800      --------->LBD16  --------->ARR11(3)                                                                          -------  --------->ARR14(2) <----------DOF2                                               --------->YAB1  <---------ARR14(2)<---------ANAC46                                            <---------HSFB2a(2) --------->GLK1(1)  <---------ANAC58                                            --------------->AGL15 ------TOE2(3)  <---------ANAC58                                                --------->HSFB2a(2) -AtSPL3        <---------ANAC58                                       ---------->ID1         <------ ---------KAN4(2)   <---------ANAC58    <----------DOF2 <---------AHL20(2)      <---------------AGL15   agaatatccagaggtttagcttgcttttatttcaagtgtctccttttgtacttcttatttattctgccaatttgtctctgttctataagaagtatcactt  2643900                                                                                <------ZmHOX2a(1)                                           <---------WOX13(1)                <------ZmHOX2a(1)          <---------AHL20(2)             --------->ATHB12          <-----------RAV1(1)           ----  --------->AtLEC2             <---------AHL20(2)                  ------>ZmHOX2a(1)             ---- -->ANAC55(2)                 --------->AHL20(2)     <----------DOF2        XXXXXXXXXXXXXXXXXXXXX>MIR447C ---ANAC55(2)     <----------DOF2       <---------YAB1   <---------YAB1 <---------ANAC46         ----   gatcatgcaggttttattgtctttttcgatgaataaatgggtctgattgcaacgtctttcttataggtcctgtggctgaggaggacatattccattggca  2644000  Previous    Next  AGI:  At3g08700.1    Description:  UBC12 (ubiquitin-conjugating enzyme 12); ubiquitin-protein ligase. similar to UBC11 (ubiquitin-conjugating enzyme 11), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G08690.1); similar to hypothetical protein OsI_006511 [Oryza sativa (indica cultivar-group)] (GB:EAY85278.1); similar to ubiquitin-conjugating enzyme 8 [Capsicum annuum] (GB:AAR83891.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 2643488    to: 2644551    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version