Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <----------DOF2                                                    <---------MYB46(3)                      --------->TOE2(3)                                                 >>>>>>>>>ARR2                   <-----------GT1                                                      >>>>>>>>>ARR1           <---------AHL20(2)                  <------ZmHOX2a(1)                      <---------YAB1 --->DAG2 --------->AHL20(2)               <---------MYB52(1)   <---------YAB1      <-----------GT1 --->DOF2 <---------AHL20(2)   <---------At4g35610--------->AHL20(2)          <---------RVE1(1)   gttgagaacaaatttttttttttacctttatacagctagtaatccgataggattatatatagagtgatgagagatttgtgatatttttacgattgttcaa  2630700                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                 --------->AHL20(2)--------->AHL20(2)                               --------->AHL20(2)--------->AHL20(2)                               <---------AHL20(2)<---------AHL20(2)                             <---------AHL20(2)<---------AHL20(2)                             --------->AHL20(2)--------->AHL20(2)                           <---------AHL20(2)--------->AHL20(2)                         --------->AHL20(2)--------->AHL20(2) --------->AHL20(1)                       --------->AHL20(2)--------->AHL20(2)--------->AHL20(2)                       <---------AHL20(2)<---------AHL20(2)<---------AHL20(2)                   <---------AHL20(2)<---------AHL20(2)--------->AHL20(2)                   --------->AHL20(2)--------->AHL20(2)<---------AHL20(2)                 --------->AHL20(2)<---------AHL20(2)--------->AHL20(2)       ---------->DOF2                 <---------AHL20(2)--------->AHL20(2)<---------AHL20(2)     ------>ZmHOX2a(1)               --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)--------->ANAC55(2)         --------->MYB52(1)--------->AHL20(2)<---------AHL20(2)    <-----------GT1       <---------MYB52(2)<---------AHL20(2)<---------AHL20(2)<---------AHL20(2)       --------->YAB1   <---------AHL20(2)<---------AHL20(2)--------->AHL20(2)<---------AHL20(2)--------->TOE1(3)   --------->AHL20(2)--------->AHL20(2)<---------AHL20(2)--------->AHL20(2)--------->TOE2(3)   cttaataaaactaacatatatatatatatatatatatatatatatatatatatatatatatatatatattcacgtttccttaaaacaatagtagttttta  2630800                                                     --------->AHL20(2)                                                   ----------->GT1                                                <------ZmHOX2a(1)                                       <-----------------AGL2                                       ----------------->AG                                  --------                                       <-----------------AG                           <----------ID1                   --------->WOX13(1)  ----------------->AGL1                       <---------ICU4                --------->GLK1(2)      <-----------------AGL1--------->ANAC46      --------->ICU4         <------ZmHOX2a(1)        <-----------GT1---------->DOF2                 ---------->DOF2       --------->MYB59    <---------AHL20(2)  <---------TOE2(3)             --------->AHL20(2)   tgggtttattaggaacagaatcaattagtttattttttacatccgatttaggaaagtaaatacactaaatagttttcaaaaaataaagatgacaaaaata  2630900                    --------->At5g28300                   --------->RAP2.3(2)                  --------->RAP2.3(1)                 ------>NtERF2                                                    <---------MYB52(1)                --------->DEAR3(1)                                  --------->GLK1(2)              <---------At5g28300                                   <---------ARR11(3)          <---------ICU4                                            --------->ARR11(3)         --------->ICU4 --------->YAB1                              <---------ARR14(2)         --------->ARR11(3)                                         --------->ARR14(2)         <---------ARR11(3)                               --------->ZAT14         <<<<<<<<<MYB98         --------->AHL20(1)                  <---------GLK1(2)     <---------GLK1(2)--------->MYB52(2)         <---------AHL20(1)     <----------DOF2           <---------ZAT18        <-------GAMYB    ----------->GT1--------->RAP2.6(2)   ---------->DOF2  --------->ZAT18       --------->ANAC46 ->AHL20(2)  <-----------GT1    <---------DAG2      ------>ZmHOX2a(1)  <----------DOF2<----------DOF2   taagggcagaaaatattaccgccgtaacataatgctttttgaataaagcttctcctcttgagcactcgagaatctttattctccgttactttcttatttc  2631000                                   ---------->DOF2                          --------->ANAC58                          --------->ANAC58                          --------->ANAC46                       <---------ZAT14                       --------->At4g35610                       <---------ZAT18                     ----------->GT1                       --------->ZAT18                 <------MYB46(1)                       --------->ZAT14                 <------MYB83                       <---------At4g35610            <---------AtMYB61                <----------DOF2--------->ANAC58     <------------CBF                                -            <---------ANAC58   --------->ANAC58--------->CCA1(2)                             <-------            <---------ANAC58 ---------->DOF2 --------->CCA1(2)                  <-----------GT1    <-   tcaagaatgcattagcgtctttgtctgcacacaaagcaaaagcagagagatagggattggtctgtaattcccaagactctattttcagtactatcgattc  2631100       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->ARR14(2)     <---------ARR14(2)  <------NtERF2 --------->LBD16                                                                  --------->MYB46(3) ------>NtERF2                                                                  <-----------GT1 -------->LBD16                                      ---------->ID1        --------------------->WRI1 --GLK1(2)                 <-------TEIL          <----------DOF2         ------>ZmHOX2a(1)          - --------LBD16            --------->CCA1(2)  <---------ZAT14        <---------At4g35610     ------>ZmHOX2a(1)   tcccggcgatctggtgagtgagatagagattcacgatgggctcagacagcactttgtctctcccttcttcatctcctccttgtaacaatcgctcctctgt  2631200                                                                                               <-----                                                                                   <-----------GT1---            <---------ALFIN1                                          <---------At4g35610    --------         <-----------GT1                     --------->LBD16         <---------TOE2(3)      <--------      <----------DOF2                       --------->LBD16          <---------TOE1(3)      --------- ----->ZmHOX2a(1)           <----------DOF2<---------LBD16        <---------MYB52(1)     <---------YAB1   tcctccaactttcaccactcggtctgtcttctttctctatctctcccccgagttctgtattaatctctgttaagcttatctgtattcacttgttattatg  2631300                                                                  <-----------RAV1(1)                                                               <---------ICU4                                                               --------->ATHB12                                                              --------->ICU4                                                              <---------YAB1                                                            --------->bZIP60(1)                                                      <---------MYB46(3)                                                      --------->LBD16                                                     <---------ANAC58                                                     <---------ANAC55(1)                                                     <---------ANAC58                                                     <---------ANAC46                                       --------->ARR14(2)   <---------TGA2(1)                                       --------->KAN4(2)    --------->TGA2(1)                 -------                                       <---------ARR14(2)   <---------bZIP60(1)       <--------HAHB4 ----YAB1                       <---------At5g28300 <---------LBD16                   --------->ATHB12 ---->TEIL                     <-----------GT1  <---------REM1(1)<---------YAB1       --------->YAB1 ->YAB1                     <---------ICU4      <-----------RAV1(1)                   <---------ICU4 -YAB1                   --------->YAB1<---------GLK1(2) ----------->HVH21          --------->GLK1(2) >ICU4                  <---------YAB1<----------TaMYB80<-----------HVH21  --------->ETT(2) <--------   aatgtaatggtttgagttttgtttttatgaaaattacagcatattctctgatgttgcgggtgacatcattgttgttgtcgatggagaatcatttctactt  2631400               <----------DOF2                                                                      <           <---------ZAT18                                                      <---------YAB1     <-         <---------ZAT14                                                        --------->ICU4     --         --------->ZAT14                                            <-----------HVH21      <---------ZAT14         --------->ZAT18                                         --------->ANAC58          --------->ZAT14    <--------P <---------DAG2                  <-----------GT1   --------->ANAC46      <---------ICU4 -->ANAC46 --------->ZAT18                   <----------DOF2     --------->ANAC58--------->YAB1   --- ---GT1  <---------ZAT18                  <-----------GT1   <------ZmHOX2a(2) --------->YAB1    -----   cacaaggttagtgcacacttttctggtttgagtttttttttttttttctttacagtttttagatcaaacgcatcagagaataataataaacattgcagtt  2631500                                           =============HOX2a_HOX2a            <------ZmHOX2a(1)              ------>ZmHOX2a(2)            =====================================HOX2a_HOX2a       --------->STY1(2)                  ==============HOX2a_HOX2a       <---------STY1(2)                  <------ZmHOX2a(2)   --------->MYB52(2)                    --------->ARR11(3) <---------MYB52(1)                      <---------ARR11(3)                   <---------GLK1(1) -------GAMYB              ======================HOX2a_HOX2a         --------->At4g35610 --------------AGL15       <------ZmHOX2a(1)     <------ZmHOX2a(1)   <---------At4g35610    --------- ------------->AGL15       =======================HOX2a_HOX2a    <---------WOX13(1)       ------->TEIL -------------->AGL3--------->ICU4      --------->GLK1(1)      --------->ATHB12   <---------LBD16 ---->ARR14(2) --------->ALFIN1         <---------GLK1(1)     <---------YAB1  --------->GLK1(1)   tccgttagtagctaggagtggaaagatgaggaagatggtgagagatctcaaggactcttcttctatgattgagcttagagatttccctggtggaccttcg  2631600  Previous    Next  AGI:  At3g08660.1    Description:  phototropic-responsive protein, putative. similar to phototropic-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT3G08570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45384.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 2631136    to: 2633172    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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