Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->ANAC58                                                    --------->ANAC58                                             --------->MYB46(3)                                           ----------->RAV1(1)                 --------->GLK1(2)                                        --------->ANAC58                  --------->SPL7   <---------                                        --------->ANAC58                <---------SPL7 ------>ZmHOX2a(1) --ARR11(3)          ------------------------>ANAC81--------->ANAC46  --------------->AtSPL3 ->ARR11(3)        --------->GLK1(2)  ---------->DOF2     --------->AHL20(2)  <---------GLK1(2) >YAB1        ---------->DOF2     <----------ID1   ------>ZmHOX2a(1)  <---------------AtSPL8   <-----   caagaacaaatttcaaaaaagaaactgtaacgaagaacaacaaagcaacaatcctcgcaatataacaaatagttcgtacagaatcgttcctattctcctt  2627100                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                             ------>ZmHOX2a(2)                                                  ----------->GT1                    --------->ATHB12                      --------->ANAC58          <-----------RAV1(2)                <---------TOE2(3)            ----------->GT1     <---------HSFB2a(2)            <---------ZAT18    <-----------GT1 --GT1 ---------->DOF2--------->ANAC58       <-----------GT1  <---------ANAC58    <---------DOF5.7(2) -----DOF2 ----------->GT1      --------->HSFB2a(2)           <---------ANAC58    --------->MYB52(1)   tcaatggacaaaagcgtttaaaaaacgctaatttctagcaattcgttttaccaggttacaatttgcgaactcaatttcagaaattaacgatttgatctac  2627200                                                                      --------->At5g28300                                                                   --------->ZAT14                                                                   <---------ZAT14                                                                  <---------ALFIN1   --------->ANAC58             --------->ANAC46                                    --------->ZAT2   <---------ZAT18   -    --------->ANAC46                       --------->MYB52(1)-------->P           <---------ZAT14 <-- -->P       <---------At5g28300        ---------->DOF2  <-----------ARR10         --------->ZAT14 --- ----At5g28300                    <<<<<<<ZML2           <---------ARR14(2)--------->ICU4    <-------- -----GT1  <-----------GT1 <---------TOE2(3)       ------>ZmHOX2a(2) ----------->GT1 --------->ANAC58   cgttctacacaatttaccccatccagattaatgctagaacaaaaagaacgggatcgcagaacttaccagcacagtaaaaatcagagcacgaagaatgttg  2627300                                                    <---------YAB1                                                  --------->CCA1(2)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                              <------ZmHOX2a(1)                                             --------->LBD16                                           <-----------RAV1(2)                                           <---------LBD16                                      <---------ARR14(2)       ------->TEIL                   --------->ARR14(2)   --------->SPL7                     <---------ARR11(3) <---------SPL7                       <---------GLK1(2)----------->GT1 ----->ZmHOX2a(2)                     --------->ARR14(3) -------ARR14(2)                      <---------ARR14(3) ------>ARR14(2)                    ----------->ARR10  <---------YAB1                ---------->DOF2 ---RAV1(1)              <------NtERF2--------->ARR11(3)                        ---------->DOF2   gatcggacgaacatgagcaaaattggaggcgaatgaagaagattttcaggagatatgatgaaaaaatttgaaacccaaaaaaaaaagaaaaggaaaccta  2627400            ======================HOX2a_HOX2a            ------>ZmHOX2a(2)                                           --------->ARR11(3)           =======================HOX2a_HOX2a                           <---------ARR11(3)           --------->GLK1(1)                                            --------->ARR14(2)           <------ZmHOX2a(2)                                            <---------ARR14(2)          --------->ARR14(2)                                           --------->GLK1(1)   <---------YAB1          <---------ARR14(2)                                           --------->KAN4(1) <---------AHL20(2)     --------->MYB52(1)                                         ---------->DOF2      --------->AHL20(2)    <---------SPL7                                        --------->AHL20(2)         <---------AHL20(2)    ------>NtERF2               <----------DOF2         *TSS  <---------YAB1--------->At4g35610   ----------->HVH21       <------ZmHOX2a(1)      --------->ANAC58    <---------KAN4(2)  --------->AHL20(2)   --------->MYB46(3) <----------DOF2             --------->ANAC58    ---------->TaMYB80<---------AHL20(2)   --------->DEAR3(1) <---------DAG2       <---------ATHB12<---------AHL20(2) ----------->HVH21<-----   gtgcgacgaccggatcccttctcgccttaggagactttgggataaatcatggaagccaaattttatcaaaggaatatccactgacatttatttattttta  2627500                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                              -------                                                                                              -------                                          ---------->DOF2                                     <------                                      <---------YAB1                                         --------                               <---------AHL20(2)                                            <-------                               --------->AHL20(1)                      ---------->DOF2       <-------                               <---------AHL20(1)                   --------------->AGL15    -------- --------->AHL20(2)         --------->AHL20(2)                <-----------ARR10              -------- <---------AHL20(2)        --------->AHL20(2) <---------ARR11(3)   --------->ANAC46   ----------->GT1 ------GT1                 <---------AHL20(2) --------->ARR11(3)  -------->P          <---------ANAC55(2)   catttaaaaaaaaaaaaaaaaactcacatttaaaatatttgtgataaagaccctcaagtttgctaatctacccaaaagagtctgaattatgtaaaattat  2627600                                                         <------ZmHOX2a(1)      <-------TEIL                        <---------AHL20(2)   <---------ANAC58                      --------->AHL20(2)   <---------ANAC58                  --------->AHL20(2)  --------->YAB1 ----->ATHB12                        <---------AHL20(2)<---------TOE2(2) ----->ATHB51                      <----------DOF2     <---------TOE1(2) -----YAB1                      <---------ARR14(2)  --------->TGA1a -->YAB1                        --------->ARR14(2)  --------->ANAC58 ->ATHB1            <-------TEIL<---------ARR11(1)  <---------O2 ---ICU4         <------MYB46(1)------->TEIL   --------->ANAC46                                    -- ->ICU4          <------MYB83  <---------ARR14(1)   <---------TGA1a                                <- --YAB1         --------->MYB46(2) ===========================bZIP_DOF                             -- --AHL20(2)     --------->MYB59<---------CCA1(2)    --------->ANAC58                               <- ->AHL20(1)     --------->MYB111(1)--------->TOE2(3)--------->O2        --------->DOF5.7(2)        -- ->AHL20(2) <---------YAB1  <------NtERF2<---------AHL20(2)      <-----------GT1     <-------TEIL<---   tattgacgtccataatgttaggttcatggcatcgtatctttaattttataggccacgtaggataatattacatcgtttacatatgagttcatcgtgagtt  2627700    --------->ZAT2    --------->At4g35610    <---------At4g35610     <-----------GT1    <---------ZAT2     <---------ICU4 ------->ANAC46        --------->AHL20(2)               --------->YAB1                          ----- --------O2            <---------AHL20(2)               <---------ICU4                          ----- ------->O2  <---------YAB1<-----------GT1              <--------HAHB4                        ------- --------TGA1a         --------->ATHB51                <---------YAB1            --------->ETT(2) ------->TGA1a        --------->ICU4                  <-----------GT1            <---------ETT(2) ------DOF5.7(2)      <---------YAB1             ----------->GT1   --------->CCA1(2)       ----------   cacgtctgctgacttatttttgtaattatttatcttcttaacaaaaaaaacaggtttatcattacatggatatagacttatagtcgacaatatttgacac  2627800                                                                                             <-------                                                                                  <-------GAMYB                                                --------->TOE2(3)                --------->MYB55(2)     ---------->DOF2                          <-----------ARR10                  --------->MYB111(2) --------->At4g35610                          <---------ARR11(1)                 <---------MYB46(3) <---------At4g35610                         <---------CCA1(2)                   --------->MYB52(2) ---->ANAC58                  <---------ANAC58<---------ARR14(2)                 <-----------RAV1(1) ---->ANAC58                  <---------ANAC46--------->ARR14(2)            --------->ARR11(3) -->ZAT6                      <---------ANAC58------->TEIL    <---------YAB1<---------ARR11(3) ->HVH21                    <---------ANAC46 <---------ARR14(1)    <XXXXXXXXXXXXXXXXXXXXMIR782     <-   tcaagctgaaagaacatgctacaaaacatgttgtgtggacatttatcgtatcttagttgatattatgagagtttttaagatgtttgttggctcttgtgat  2627900              --------->ZAT14              <---------ZAT14            --------->ANAC46         --------->ARR14(2)         <---------ZAT14                                                               ------>MYB46(1)         <---------ARR14(2)   --------->TOE2(3)                                        ------>MYB83  <---------ARR14(2)      --------->ANAC46                            <---------ANAC55(2)  --------->ARR14(2)    --------->ANAC46                     ----------->GT1         <---------MYB111(1)  --------->GLK1(2)     --------->ANAC58        --------->YAB1       <-------TEIL    --------->AtMYB61 --YAB1  --------->ZAT14--------->ANAC58     --------->YAB1---------->DOF2--------->DAG2 --------TOE2(3)       --------->ZAT18      <---------YAB1 --------->YAB1---------->DOF2         <---   taagaatccagtatactgaactaagcacacaacatcaacaatgcttataataagaaaacaataaagataaatacataaagcataccaccaaatcgatcga  2628000  Previous    Next  AGI:  At3g08650.1    Description:  metal transporter family protein. similar to metal transporter family protein [Arabidopsis thaliana] (TAIR:AT3G20870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69618.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45376.1); contains InterPro domain Zinc/iron permease; (InterPro:IPR003689) Range:  from: 2624467    to: 2627456    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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