Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->AHL20(2)                       --------->YAB1                      <---------ATHB12                     --------->ANAC58                     --------->ANAC58                    --------->WOX13(1)                 --------->ANAC58                                     --------->ANAC46                 --------->ANAC46                                     --------->ANAC58                 --------->ANAC58                                     --------->ANAC58                <---------LBD16                                      <---------LBD16     <-------MYC3                <------NtERF2                                     --------->ZAT2         ------->MYC3                --------->LBD16                     <---------At4g35610                 --------->O2                --------->At4g35610             <-----------HVH21 ----------->RAV1(2)   <---------O2              <---------WRKY12               ------>ZmHOX2a(1)    <---------ZAT2      <---------ALFIN1              <---------WRKY38(1)            <---------At4g35610  <---------At4g35610 ------->GAMYB   <--------P <---------DEAR3(1)             --------->At4g35610  --------->At4g35610--------->MYB46(3) -----ANAC58<-----------HVH21      <----------DOF2  --------->At4g35610  --------->MYB52(1) -----ANAC58<---------SPL7<---------GLK1(2)--------->ZAT18 <---------ARR11(3)       -------->P   tcgaggtaagtctcggtccgcgcaatcaaattctcttctttgaagtcctctgtcatctcaagataaccagctgcgcaacggatagcaaccacgttggaga  2603900                          --------->ARR11(3)                   --------->LBD16                              ---------->DOF2                   <---------SPL7                            --------->HSFB2a(2)                  <---------ANAC58  <---------ANAC46       ----------->RAV1(2)                  <---------ANAC58  <---------ANAC58       <---------ZAT2  --------->At4g35610                  <---------ANAC46  <---------ANAC58       --------->ZAT2  <---------At4g35610     --------->HSFB2a(2)  <---------ARR11(3)              ------>MYB83     --------->ZAT2     <---------HSFB2a(2)  --------->ARR14(2)              -------->P  <---------LBD16    ------>ZmHOX2a(2)     <---------ARR14(2)              ------>MYB46(1)  <---------ZAT2  <---------ARR11(3)  <---------At4g35610                <---------ALFIN1  <---------GLK1(1)        <  --------->ARR11(3)  --------->At4g35610               --------->MYB46(3) --------->GLK1(1)---------   tagtgatctcgaagttgatgccgtagcagaacttcatggcgagttcaaacgtcttagacccacctggaaagtctcggagctctgtatgcgagagatttga  2604000                                                    ---------->DOF2                                                    --------->MYB52(1)                                                <---------------AGL15                                                --------------->AGL15                                               ----------------->AGL3                                               <-----------------AGL3                                               ======================================================                                               ----------------->AGL1                                             --------->ANAC58                                             --------->ANAC46                    --------->TOE2(3)                                             --------->ANAC58                   ----------->GT1                                          --------->ANAC46          --------->AHL20(2)                                        <---------ALFIN1            <---------AHL20(2)                                        --------->ANAC46            <---------ATHB51            -----                            <---------MYB59--------->DEAR3(1)      <---------AHL20(1)          <----- ---------YAB1     ------>NtERF2 <---------ICU4<-----------------AG--------->AHL20(2)       --------- >CCA1(2)       ------>NtERF2------>ZmHOX2a(1) ----------------->AGL2        --------->YAB1<---------GLK1(1)   agatgattctttcatctctgccaccattttcctaatctttccacaccgagccactaaaggaaactgcaaaataattcaaacatcgtaaattgaaattccg  2604100                                                                                               ------                                                                                              <------                                                                                             --------                                        --------------->AGL15                           --------->ANAC58         <---------ANAC58             -------->P                                        --------->LBD16         <---------ANAC46          <---------MYB52(2)                                   --------->ANAC46         <-----------RAV1(1)    --------->ZAT14----------->GT1                          --------->ANAC58     <----------DOF2            <------ZmHOX2a(2)       <------ZmHOX2a(1)        --------->bZIP60(1) =======================================================MADS_MADS                <---------bZIP60(1) ---->LBD16 --------->ZAT18     ===============================HOX2a_HOX2a  --------->YAB1 ---------- ----ANAC46--------->ALFIN1   --------->At4g35610   ---------->DOF2   ----------->RAV1(1)--------->LBD16 >GLK1(2)<---------ANAC58 --------->MYB52(1)   <---------ANAC46      --------->MYB46(3)<---------LBD16   tcgaacactttgtgtgggcaaaaaaaaaaaacagatcactaaccttgtggagtaaaaaggactctccatcaacaacaattgtgatgtctcccgcaacatc  2604200      --------->At4g35610  --------->ARR14(2)                                               --------->ANAC55(2)  <---------KAN4(2)                         ------->TEIL           <---------ANAC55(2)  <---------ARR14(2)                 ------>ZmHOX2a(1)     --------->GLK1(1)  --------->GLK1(2)                 --------->TOE2(3)   --------->ANAC58  ---------->TaMYB80             ------->TEIL<---------At4g35610   --------->ANAC46<----------ID1 --->At4g35610                   --------->GLK1(2)      --------->ANAC58         <---------------AtSPL8 ---ARR11(3)          ----------->GT1<----------DOF2--------->ANAC58           ---------->DOF2 ->REM1(1)     <---------AHL20(2)--------->ARR14(2) <---------ANAC55(2) <---------WOX13(1)   -------- ->RAV1(1)     --------->AHL20(2)<---------ARR14(2) --------->ANAC58  --------->ATHB12--------->MYB46(3)   tgagaatatgctgcaatttatatatggtaaaaacgaatcctttatgcatcggataagtaagaaatctatacgtgattgcataaaaggaacaaactttgac  2604300                                                                          <------ZmHOX2a(1)                                                                       --------->At4g35610                                                                       <---------At4g35610                                                                       <------NtERF2                                                                     <-----------RAV1(2)                                           --------->ZAT2         <-------PIF5        ---------->DOF2                    <---------ZAT2         ------->PIF5      --------->ANAC58                     --------->At4g35610 <-----------RAV1(2)      --------->ANAC58                     <---------At4g35610--------->ZAT2                  <------ --->HVH21                           ---------->DOF2        <------ZmHOX2a(1)          <------------CBF   atgtttgaacgaaagagagacagagaacagaccgagtggcaaaggagctggagaagatggaaggagcaggggcagaggaagacgagtgagattgagcatt  2604400                                                                                             <-------                                                                                            <--------                                                       <-----------------------TaNAC69(2)   ---------                                                  --------->HSFB2a(2)                   <---------LBD16                                                  <---------HSFB2a(2)                  <---------ANAC46                                          <------ZmHOX2a(1)                        <---------ANAC58                                          --------->ATERF1(1)                  <----------DOF2             <------------CBF           --------->ALFIN1                  <----------DOF2   <--------    --------->AHL20(2)                 <------ZmHOX2a(1)   --------->ARR14(2)<----------------------- ------CBF>>>>>>>>>>>>>>>>>LFY  ------->TEIL   <----------DOF2   <----------DOF2   <---------ANAC58   gtccgatataatacccattgtgaccttgagtatgaatttgaggaggagcctttcagaaacatataggctttgaacactttccttttcttgctcggatttt  2604500                                      <---------ANAC58                                      <---------ANAC55(2)                                      <---------ANAC46                    ===========================                                      --------->ANAC55(2)                 <----------DOF2                               ------------>CBF                           <---------------AGL15 --RVE1(1)                   <----------DOF2                              --------------->AGL15 -ARR14(2)                 ------->TEIL     --------->YAB1               <-----------------AGL2     < >ARR14(2)               <---------ZAT18    <---------ICU4               <-----------------AGL3    <- -GLK1(2)                --------->ZAT18   --------->ICU4            --------->CCA1(2)    <---------YAB1 -ANAC81         <----------DOF2      <---------ANAC58       ---------->DOF2          <---------ANAC46   ttaaaaactctctaatagactttataatgcactttcaatttcgtaatcttgactccaaaaaaaaaaagaagagatgctttttttggtgatgtatgattca  2604600         ---------->DOF2   ------->PIF5   <-------MYC4   <-------PIF5   ------->MYC2   <-------MYC2   ------->MYC4   ------->PIF4                         <---------GLK1(1)   <-------MYC3                         <---------At4g35610   ------->MYC3                         --------->GLK1(1)   <-------PIF4                         --------->At4g35610  <---------ANAC55(2)                   <---------ZAT2  --------->ANAC55(2)               --------->ANAC58  <---------TGA1a                   --------->ANAC46  --------->ANAC58                 <---------LBD16  --------->TGA1a                <---------SPL7                                      <---------DAG2  --------->ANAC58           --------->ALFIN1                                  <----------DOF2  --------->O2             <---------ANAC58                                 <---------ALFIN1  <---------O2             <---------ANAC46                                --------->ZAT18  ==================bZIP_DOF <-----------RAV1(1)                         --------->ZAT18        <----  =============================MYC_MYB  --------->ZAT2                   <---------ZAT18  <---------- ------------>OsbHLH66     <---------ANAC58    ---------->DOF2         <---------RAP2.3(3)----------- ===========bZIP_DOF   ----------------------->TaNAC69(2)             <---------ANAC46<---------ZAT14 ------------OsbHLH66  <-------GAMYB--------->ANAC58      --------->YAB1------>NtERF2<----------DOF2 --------ZAT18    --------->ALFIN1<---------ANAC46       <---------ATHB51<------NtERF2--------->ZAT14   gagcacgtgagaaaagccgagagggggttgtgtgtggcacggagctccataaagactcaattatagtctcttgggggcacactttcactttactaattga  2604700                                                         <---------ALFIN1                                                         ------->GAMYB                                                        <---------MYB111(2)                                                        --------->MYB46(3)                                                       ------>MYB46(1)                                                       -------->P                                                       ------>MYB83                                                     ------->GAMYB                                                    --------->MYB46(3)            --------->AtMYB61                       <---------MYB52(2)                 <----------DOF2      --------->YAB1                                <---------MYB55(2)   <----------DOF2 -----TOE2(3)  <---------ALFIN1                    -------->P     ------->TEIL         <---------DAG2 -----AGL15 ------->GAMYB                     <-----------GT1    <-----------GT1 --------->ZAT6 ---->AGL15--------->MYB46(3)            <----------DOF2<---------MYB55(2)  <-----------HVH21   ggtctctattacaacctccactctcagtttctatctaatctctcttttatactaaccaaccacctatgaaccctactttgtcaccactacttttgctcta  2604800  Previous    Next  AGI:  At3g08570.1    Description:  phototropic-responsive protein, putative. similar to phototropic-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT3G08660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45384.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 2602264    to: 2604281    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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