Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                           <-----------ARR10                                        -                                           <---------AGP1                                          --                                           --------->ARR14(2)                                      <-                                           <---------ARR11(3)                                     <--                                           <---------ARR14(2)                                     ---                                           --------->AGP1                                        <---                                           --------->ARR11(3)                                   -----                                          <---------CCA1(2)                                 ---------                                 --------->ANAC46                                           ---------                                <---------TOE2(3)                                           ---------                               <-----------GT1                                            ---------->DOF2                               --------->MYB52(1)                             --------->AtLEC2  <----                          --------->AHL20(1) ------>ZmHOX2a(2)             <-----------------------TaNAC69(2)    --------->MYB46(3)    --------->AHL20(2)<------ZmHOX2a(2) --------->GLK1(1)          <---------ATHB12 ------->ANAC46           <---------AHL20(1)--------->CCA1(2) <---------GLK1(1)<-------TEIL--------->TOE1(2)   cagacaacaacttgaaattcggcattgatatattaacgaaacacagatctgagcatagttagagaaatctgatcagaaacatgcattcccaaacaagcga  2595200 ---------->GT1 -------->LBD16 ------->HSFB2a(2) --------HSFB2a(2) -------LBD16             ==============================HOX2a_HOX2a --->ZmHOX2a(2)           <------ZmHOX2a(2)      <------ZmHOX2a(1)           --------->ZAT14 ---ZmHOX2a(2)          ------->GAMYB   <---------At4g35610                  <---------ZAT14 ---->ARR14(2)         <---------MYB52(2) <------ZmHOX2a(2)         --------->YAB1 >ANAC58               --------->MYB46(3) ==============HOX2a_HOX2a<---------ATHB12 >ANAC58             --------->MYB52(1) --------->At4g35610      --------->WOX13(1) >ANAC46     ----------->GT1       <---------GLK1(1)           <---------ATHB12            --------->YAB1 -----ARR14(2)    --------->ZAT6   --------->GLK1(1)         --------->WOX13(1)       <----------DOF2   tccggaaaaactagagagtaacacaacgatcgagcagaattcagatcagtaggaaactggaatcaatcaatcaagagactgaacagagcttaatcgtaga  2595300                    --------->CCA1(2)                                                             <--                   --------->ARR14(2)                                                             <--                <------ZmHOX2a(1)                                                                 ---              --------->LBD16                                                                     <--             <---------LBD16                                               <------ZmHOX2a(1)      <--             <---------HSFB2a(2)                                       <---------MYB52(1)        <---             <-----------RAV1(2)                 --------->ZAT14      <-----------TGA1          -----             --------->HSFB2a(2)                 <---------ZAT14      <-----------HVH21        <-----        <---------DEAR3(2)                --------->CCA1(2)          --------->DEAR3(1)        <-----  <---------At5g28300<-------TEIL       --------->YAB1             <---------At5g28300      <-------- --------->MYB52(1)<---------ARR14(2)---------->DOF2       <------ZmHOX2a(1)      ------>ZmHOX2a(1)<-   aaatcacggtcgattccaggagatacacatctaaatattcaaagataagagtgaagagtaaggagaactcaccgtcaggacctccttcatcgtgatgggg  2595400         <---------RAP2.6(3)        --------->RAP2.3(3)        --------->RRTF1(3)        --------->RAP2.3(2)        --------->DREB2C(2)        --------->RRTF1(2)        ------->GAMYB        --------->DEAR3(1)        --------->ANAC58        <---------ATERF1(2)        --------->ANAC58        --------->ANAC46        --------->RAP2.6(2)       --------->ATERF1(1)       --------->RAP2.3(1)       --------->MYB46(3)       --------->ERF1       --------->RRTF1(1)      <---------ZAT2      <---------At4g35610      <---------ATERF1(1)      --------->ATERF1(1)      <------NtERF2                                --------->ANAC58      --------->ZAT2                               --------->ANAC58      --------->At4g35610                         --------->SPL7 -------DEAR3(1)                                 ------>NtERF2 -------ANAC58                                  ----------->HVH21 ------>ALFIN1                                <---------LBD16 -------ANAC58                            --------->ARR14(2)                   ----------->HVH21 -------ANAC46                            <---------ARR14(2)       --------->At4g35610 ---NtERF2<------NtERF2                  <---------GLK1(1)         <---------At4g35610 ->NtERF2------>NtERF2   <---------At4g35610  --------->LBD16    <---------RAP2.6(2)         <------- ----DEAR3(1)            --------->At4g35610 <---------LBD16     --------->ANAC46  --------->RAP2.6(2) ----RAP2.3(3)    <---------WRKY18(1)   ----------->ARR10     --------->ARR14(2)  --------->MYB46(3) -ANAC46--------->ATERF1(2)          ----------->GT1     --------->AHL20(2)    ------>ZmHOX2a(1)<---- ------GAMYB --------->ICU4<------ZmHOX2a(2)<---------LBD16   <---------ARR14(2)  <-----------------AGL1   gcgttggcagccgccatgtttgacctcagatcacagcaagagtaaatccggggacggaatcaaatatacggctgagaagtcctgaccgccaatggccagg  2595500                                                       --------->ANAC58                                                       --------->ANAC58                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                  --------->CCA1(2)                                                 <---------ARR14(2)                                                 <---------AGP1                                                 --------->AGP1                                                 --------->ARR14(2)           =================bZIP_DOF             <---------ARR11(3)             ---------->DOF2     -           <---------TGA1a                       --------->ARR11(3)       --------->ALFIN1     ------           <---------O2                         <---------CCA1(2)      --------->DAG2        <------- ----RAV1(2)                                ------>NtERF2            ---------->DOF2    ----------->GT1 --ZmHOX2a(1)    ---------->DOF2         --------->At4g35610  --------->ZAT18 *TSS    ---------->DOF2   agatagaaccgagacgagagaaagactggagaagaaatgaaatcgctgccagatctgaagcaagtgaacgagaaaggtgatggaaagagaaagaaaattg  2595600                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                                 <-----------------AGL1                            --------->ANAC58                                  <---------RAP2.6(2)                            <---------ANAC55(2)                              <-------TEIL                            --------->ANAC55(2)                              --------->SPL7                            --------->ANAC58        --------->YAB1         --------->ARR14(2)                  ----------->TBP--------->ICU4----------------->AGL3      <---------ARR14(2)       --------->YAB1     <--------P           ------------>CBF            <-----------HVH21 --------->DOF2  <---------AHL20(1)           <------ZmHOX2a(2)           --------->ZAT2           <- ----->GT1       --------->AHL20(1)    ---------->DOF2               <-----------GT1 <---------CCA1(2) -----CBF       --------->AHL20(2)    --------->MYB52(1)          --------->YAB1------>NtERF2 ------>ZmHOX2a(1)   agaaaagaagaataacaaatatatatgggtaagtaatgacgaacagcgatccaattagagtcttacatttataaccaggtccggcccatatcggtcctta  2595700                                          --------->AHL20(1)                                          <---------AHL20(1)                                          --------->AHL20(2)                                   ------->MYC2                                   <-------MYC3                                   <-------MYC2                                   ------->MYC3                                  --------->ANAC55(2)                                  ----------->GT1                                  <---------ANAC55(2)                                  --------->ANAC58                                  <---------TGA1a          --------->AHL20(2)                                  --------->TGA1a          <---------AHL20(2)                                  <---------O2   <---------WOX13(1)                                  --------->ANAC58      <----------DOF2                                  --------->O2 --------->ATHB12                                  =================================bZIP_DOF                             --------->ANAC46 <---------AHL20(2)                             --------->ANAC58--------->AHL20(2)         --------->TOE2(3) <---------AHL20(2)                             --------->ANAC58<---------AHL20(2)         --------->TOE1(3) --------->AHL20(2) --------ZAT18               ----------->HVH21<---------YAB1      <---------TOE2(3)    --------->YAB1   ctgggctctaagcatccgaatttctaatgagacgacacgtgaaatattttaattggtgcttttaaatgaaggtaccttaggtgaaacaacaataaatgac  2595800                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                               <-----                                                                                              -------                                  <--------ATHB1                        <---------AHL20(2)   <-------          --------->CCA1(2)       -------->HAHB4                       <---------AHL20(1)    --------       <---------TOE2(3)          <--------HAHB4                       <---------AHL20(2)   <--------       <---------YAB1             --------->YAB1                    --------->YAB1        -------->HAHB4  --------->ATHB51                --------->ATHB51                  <---------ICU4        --------->YAB1  --------->YAB1                  <---------ICU4                    <--------ATHB1        <--------HAHB4  <--------ATHB1                 <---------ATHB51                   <---------AHL20(2)    <--------ATHB1  <--------HAHB4                 --------->AHL20(2)                 --------->AHL20(2)    <---------ICU4  -------->HAHB4                 <---------YAB1                     <---------AHL20(1)    --------->ATHB51  <---------ICU4            --------->TOE2(3)                      --------->ICU4        <---------YAB1 <---------ATHB51  --------->ANAC58                              --------->YAB1          --------->AHL20(2) --------->ICU4    --------->ANAC58    <---------TOE2(3)       --------->AHL20(2)        <---------ATHB51 <---------YAB1 ------>ZmHOX2a(2)--------->ICU4              <----------DOF2        --------->TOE2(3) --------->AHL20(2)--------->ANAC46    <---------YAB1<-----------HVH21 --------->AHL20(2)--------->ICU4   ttaataattaagatttgatccaagaaaaaaacttaataattaagaatggaagaagtgtcatgacttttaataattttttttaaaaaacttaataattaaa  2595900                               <---------YAB1                --------->YAB1                               <---------TOE2(3)          --------->ATHB51                          <--------ATHB1                  <--------HAHB4        --------->ANAC58  <--------HAHB4                  -------->HAHB4        --------->ANAC46  -------->HAHB4                  --------->YAB1 ------->CCA1(2)          --------->ATHB51                --------->ATHB12 ------>ARR11(1)          <---------ICU4                  <--------ATHB1               ------>ZmHOX2a(2) -------ARR11(3)          --------->YAB1                  <---------ICU4               -------------- ----TOE2(3)             <---------ATHB51                <---------YAB1                -------------- --->DOF2                --------->ICU4                  --------->ICU4       --------->AHL20(2) --AHL20(2)              <---------YAB1                  --------->AHL20(2)   <---------AHL20(2) ->AHL20(2)         --------->TOE2(3)                    <---------ATHB51 --------->AHL20(2) -YAB1  --------->ANAC58 --------->AHL20(2)  <-----------HVH21          --------->TOE2(3) ---------->DOF2   gatttgatacaagaaaaaaaaaacttaataattaagaatggaagaagtgtcatgacttaataattagaaacaaaacttaattaatctgatccaaaagaag  2596000                              <---------WOX13(1)                            --------->ATHB12                            <---------ICU4                           <---------YAB1                         --------->YAB1                   --------->ANAC58 --->AGL3           <---------YAB1   <--------P           --------->ANAC58                     ------ --->AGL2<-----------HVH21 --------->ICU4       <-----------RAV1(1)                          <-------   aaggaatattatgtcatagagtatcactgatgattgcaggttgcaattgtatgttgcatcaagtcatccgtcttggttccattcagttttctgtgatgaa  2596100  Previous    Next  AGI:  At3g08530.1    Description:  clathrin heavy chain, putative. similar to clathrin heavy chain, putative [Arabidopsis thaliana] (TAIR:AT3G11130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41391.1); similar to hypothetical protein OsJ_033574 [Oryza sativa (japonica cultivar-group)] (GB:EAZ19365.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79917.1); contains InterPro domain Clathrin, heavy chain (InterPro:IPR016341); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Clathrin, heavy chain, linker and propeller; (InterPro:I Range:  from: 2586812    to: 2595578    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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