Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                ------>NtERF2                                                                                            ---------                                                                                           <---------ATERF1(1)                                                                                           --------->ABI4(2)                                                                                        <---------ATERF1(1)                                                                                       <---------DEAR3(1)                                                                                     --------->ANAC46                                     <-----------HVH21                               <---------O2                                    ------->GAMYB                                 ----------->HVH21                                 --------->MYB52(1)                      --------->ARR11(3)------>NtERF2                                <---------WRKY38(1)             <-----------------AGL1<---------LBD16                      --------->ALFIN1 --------->YAB1        <----------DOF2     ------>ZmHOX2a(2)            --------->YAB1<---------At4g35610                <---------DAG2    <---------ARR11(3)----           <------ZmHOX2a(2)    <---------WRKY12      --------------------->WRI1<---------At4g35610   tttctgaacatcgatcagaaacctgtggagatgatcaacggtcataactccattctctgagtacttttcgaaaatggtcttgatctcacgcggtgcctcc  2585500                                                                                             <-------                                                                                           <---------ICU4                                                                                           <--------ATHB1                                                                                           -------->HAHB4                                                                                          <---------YAB1                                                                                          --------->ICU4                                                                                 <----------DOF2                                                                                ------>ZmHOX2a(2)                                                                              <-----------ARR10                       ---------->DOF2                                        <---------ARR11(3)                   --------->LBD16                                            --------->ARR11(3)         --------->ANAC58     --------->ARR14(2)  <---------ANAC58            <---------ARR14(2)         --------->ANAC58 --------->At4g35610 <---------MYB52(1)              ------->TEIL<---------ATHB12    <---------ZAT6 ------>NtERF2           ------->TEIL                  --------->MYB52(1)--------->ATHB12  <---------ANAC46<---------DEAR3(1)       <---------TOE1(2)    ---------->DOF2<------ZmHOX2a(2) >ATERF1(1) --------->ARR14(2)<---------ARR14(2)  <---------ANAC58    ---------->DOF2  ------------>ATHB5 ----->At4g35610 <---------LBD16       <---------------AtSPL3----------->GT1  --------->ARR14(2)   gatgcagtgtaacgaaacctccggcgaaagcagaaacacactttgtacgtttgcttcgacatgaagtaaagaaaaagacggatctttgggtaatgattgg  2585600                                                                                                    <                                                                                        --------->ARR14(2)                                                                                        --------->GLK1(2)                                                                                   <------ZmHOX2a(2)<      <---------REM1(1)                  --------->YAB1                           <---------ARR11(3)<      <---------YAB1                 <---------AHL20(2)                     --------->ANAC58        <    --------->YAB1          <---------ANAC58          <---------YAB1        --------->ANAC58        <   --------->ICU4           <---------ANAC46    --------->ARR11(3)        ---------->DOF2           - --WOX13(1)                 <---------ANAC58    <---------ARR11(3) <---------GLK1(1)   <---------GLK1(2)   agacgatgatgaaggaatgaagtagggtttgtgtgttatataatcagaactatcttctcattgtttttgaaatcagacaagcgagatcagaatcgtcgtt  2585700                                                                                                    -              ---------->DOF2                                                                      <-         --------->At4g35610                                                                      <--         <---------At4g35610            <----------DOF2                                           ---        --------->ARR14(2)       ---------->ID1                                                   <--        <---------ARR14(2)       <-----------GT1                                                  ---   <-----------HVH21            <-----------GT1                                                   ---  --------->ALFIN1         <---------CCA1(1)                     --------->ICU4                   <-- ---------AtLEC2           <---------RVE1(1)            ------>ZmHOX2a(1)    ------>ZmHOX2a(2)    <-- ---------ANAC58          --------->ARR11(3)      <-----------ARR10        <---------ARR11(3)     --- ---------ANAC55(1)       <---------GLK1(2)       --------->ARR14(2)       --------->ARR11(3)    ---- ---------ANAC58          <---------ARR11(3)      <---------ARR14(2) <---------AHL20(2)  --------->ETT(1) ---------ANAC46         <---------RVE1(1)        ------->TEIL   ----------->GT1  ------->TEIL------- -------->ANAC55(2) ---------->DOF2 <----------DOF2     ============================HOX2a_HOX2a -----   ttgcgtgtcgcatctgcaaagacaaagagatttttttcctttctttctagtgaatctcctccatgtaatgtttaatcgatcttgaaccttgtcggaaaaa  2585800                       <---------ARR14(2)                       --------->KAN4(2)                       --------->ARR11(3)    <----------DOF2    <---------ARR11(3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------GLK1(2) ----->ZmHOX2a(2)      --------->ARR14(2) -----ZmHOX2a(2)      --------->KAN4(1) -------ARR14(2)      --------->HSFB2a(1) ------>ARR14(2)      <---------GLK1(1)                                                             < ---------ARR10       --------->GLK1(1)                                                     --------- ------>AGP1          <---------KAN4(1)                                                     >>>>>>>>> ------>ARR14(3)      <---------HSFB2a(1)                                                   --------- -------ARR14(3)      <----------TaMYB80                                                    --------- -------ARR11(3)     <---------ARR14(2)                   <------------CBF                  --------- ------>ARR11(3)     <-----------ARR10                   *TSS    <----------DOF2          <---------MYB52(1) ----->RVE1(1)       --------->ARR14(2)                  --------->ATHB12                ------------ --->DOF2            ---------->TaMYB80                 <---------AHL20(2)   ---------->DOF2--------- ------>ARR10        <---------KAN4(2)                 <----------DOF2    --------->YAB1<---------TOE2(3)   gatcttctttctctctctgtgcgaatatcccctctggcaaattcttatccatttgggttttattgggcttttgaaataataaagcccattaagttagtta  2585900                                                                        ------>ZmHOX2a(1)                                                                    <---------ALFIN1                                                                   <---------At4g35610                                                                   ------>NtERF2                                                                  <---------ALFIN1                                                                  --------->DEAR3(1)      <-----------RAV1(1)                                         <---------ATERF1(1) ---------TOE2(3)                             --------->ARR11(3) --------->RAP2.3(1) -->GT1                                       <---------ARR11(3)<---------ATERF1(1) >AtMYB44                             --------->At4g35610       --------->LBD16 >MYB46(2)                            <---------At4g35610       ------>NtERF2 >MYB59                              --------->ANAC58          --------->DEAR3(1) >MYB52(2)                           --------->ANAC58         <---------LBD16                       - >MYB.PH3(2)            <------ZmHOX2a(1)     --------->GLK1(2)--------->ANAC46  ---------->DOF2  --- >MYB111(1)      ---------->DOF2    --------->SPL7         <---------At4g35610------>ZmHOX2a(1)------   ctagggttttgttgttgtttaaaggaggaataagagcgtaagctacaaaatctttctattcatctccgccgctcctcatcctgtaaagctaaacaaataa  2586000                  <---------GLK1(2)                 <---------At4g35610                 --------->At4g35610       --------->TOE1(2)                                             <---------AHL20(2)   <------ZmHOX2a(1)                                            <---------WOX13(1) -------->At4g35610                            <--------P      >>>>>>>>>ARR2 ------>YAB1     <---------ZAT2             <---------TOE1(3) --------->ATHB12 --->YAB1  <------ZmHOX2a(1)  --------->YAB1<---------TOE2(3)<---------YAB1         <---------ZAT6   tcagaggaacgaaggagacagcttctgcgaaatcagcatgagagccaaggttagtaatgggttttgattgtttaatggattttttagtgatgagaaattg  2586100                         <---------ANAC58                  <---------TOE1(3)                  <---------TOE2(3)              <----------DOF2             ------>ZmHOX2a(2)            <------ZmHOX2a(2)       <-------GAMYB           <---------ARR14(2)      --------->ALFIN1    <---------ANAC46           <---------ARR11(3)      <-----------RAV1(1) <---------ANAC58           --------->ARR14(2)    <---------ANAC58      <---------ANAC58                    ----------           --------->ARR11(3)    <---------ANAC58    <XXXXXXXXXXXXXXXXXXXXXMIR831 --------->ANAC58          <------ZmHOX2a(1)      <---------ANAC46>>>>>>>>>TBF1             <------ZmHOX2a(1)      --------->REM1(2)  <---------ANAC46      xxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->ANAC58  <     --------->ALFIN1    <---------ANAC58  --------->ALFIN1                ==========================   <---------ANAC46  <---------ANAC46    <---------ANAC46      <------ZmHOX2a(1)--------->CCA1(2)  xx   aagtagtgtgtaggatctttatggtttgtgtgtttgtgtgttgcagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatgagacag  2586200              --------->LBD16            <---------LBD16           <-------TEIL          --------->GLK1(2)          --------->ARR14(1)          --------->CCA1(2)         <---------GLK1(2)         <---------ARR14(2)                     ------>MYB83         --------->ARR14(2)                     ------>MYB46(1)       ----------->ARR10                <---------HSFB2a(2)         <------MYB46(1) ->HVH21 --------->ARR11(1)             --------->HSFB2a(2)         <------MYB83<-----------GT1 ------ZmHOX2a(2)                   <----------DOF2                 <---------MYB46(3) ======HOX2a_HOX2a           <----------DOF2    -------->P  <XXXXXXXXXXXXXXXXXXXMIR172B* xxxxxxxxxxxxxx>smallRNA(i)---------->ID1    --------->MYB46(3) <-----------RAV1(1)             <----   cgatctaagtagattcgggagtttgttttgtctttcttctttttagaaccaactcttatgtgagttttgttggttttgcaattttcaatttgaatgtttt  2586300                                                            <---------YAB1                                                         ------>ZmHOX2a(1)                                                       ------>ZmHOX2a(2)                                                       =============================HOX2a_HOX2a            ------->TEIL                              <---------YAB1            --------->GLK1(2)                        --------->ARR11(3)            <---------ARR11(1)                       <---------ARR11(3)            --------->ARR11(3)            <-----------ARR10                      <---------HSFB2a(1)             <---------ARR11(3)           <---------ARR14(1)                      --------->ICU4              ---------->DOF2      ------>MYB46(1)                              --------->HSFB2a(1)       ------>ZmHOX2a(1)      ------>MYB83                                 --------->KAN4(1)        --------->TOE1(3)    <---------MYB59                <---------YAB1  <---------KAN4(1)        --------->TOE2(3)       - -------RAV1(1)            --------->YAB1         <---------KAN4(2)   <---------GLK1(2)            <-   gttggaccaaatcgaatctatgttttctattagaattatgtttattacatggaatgatccttatgagttactgattctccttaaagttcttcaatctgct  2586400  Previous    Next  AGI:  At3g08510.1    Description:  ATPLC2 (PHOSPHOLIPASE C 2); phospholipase C. similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT5G58700.1); similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT2G40116.1); similar to phosphoinositide-specific phospholipase C, putative [Arabidopsis thaliana] (TAIR:AT3G55940.1); similar to phosphoinositide-specific phospholipase C P13 (GB:AAB03258.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64084.1); similar to phosphoinositide-specific phospholipase C [Brassica napus] (GB:AAD26119.1); contains InterPro domain Phospholipase C, phosphat Range:  from: 2582368    to: 2585857    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g08520.1    Description:  60S ribosomal protein L41 (RPL41D). contains InterPro domain Ribosomal protein L41; (InterPro:IPR007836) Range:  from: 2586038    to: 2586212    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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