Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <------ZmHOX2a(2)       ==================HOX2a_HOX2a       ==============================HOX2a_HOX2a       <------ZmHOX2a(1)     --------->ARR11(3)   ======================HOX2a_HOX2a   =====================HOX2a_HOX2a   ==================================HOX2a_HOX2a   ------>ZmHOX2a(1)         <---------ARR11(3) ----------->RAV1(2)  <-------MYC3 ----->ZmHOX2a(1)     ------->MYC3 --------ALFIN1    <---------ALFIN1 -->ZmHOX2a(1)    ------>ZmHOX2a(2) >ZmHOX2a(2)     <------ZmHOX2a(2) ->AGP1=================HOX2a_HOX2a --GLK1(2)      <---------ARR14(2) ->ARR11(3)     --------->ARR14(2) --ARR11(3)    <------ZmHOX2a(1)             <---------WOX13(1) --ARR14(2)    ======================HOX2a_HOX2a   --------->TOE1(2)  <-----------GT1 ->ARR14(2)   <---------HSFC1(2)        --------->ANAC58      <------NtERF2 -GLK1(1)     --------->HSFC1(2)        --------->ANAC55(2)  ------>NtERF2 >GLK1(1)     <---------HSFB2a(1)       --------->ANAC58    <----------ID1     --------->TOE2(3) ->ARR10      --------->HSFB2a(1)    <------NtERF2------>ZmHOX2a(2)<----------DOF2---------->DOF2   tcctcctgaggagagaaggatccacgtttaagatcaggcctcaagtaattgatccagcgaaggcgacaacttttaccacaacgtaaaagaccagcatttc  2577900                  <---------ANAC58                  <---------ANAC58               <---------ARR11(3)                                              ------>ZmHOX2a(1)        --------->ANAC58                         <---------GLK1(2)             <----------DOF2        --------->ANAC58                        --------->At4g35610     ---------->DOF2           ---    <-----------HVH21                  ------->TEIL                    --------->AtMYB61         <---   <---------bZIP60(1)                <---------CCA1(2)             ------>NtERF2               <----   --------->bZIP60(2)         <---------WRKY38(1)             <-----------RAV1(2)              -----   --------->bZIP60(1)    <---------MYB52(1)    <---------At4g35610--------->DEAR3(1)         <------   tagcgatgtcactccaacatccttgtccattagtcaacatgtatcttatcagcttctcatcttcatcaggcgaccaaagtccttttcttagcttcggttt  2578000                 --------->YAB1                 <---------AtLEC2           <---------ALFIN1     <-----------GT1--------->ATHB12 <---------YAB1 <-------TEIL                                            <---------ICU4 ------->ID1  <-------MYC2                                           <---------ICU4 ----GAMYB --------->AtMYB61                                         --------->YAB1         <-------- -----MYB46(3)<-------MYC3       <----------DOF2        <---------LBD16<---------YAB1  --------->ATERF1(1) ---->MYB52(2)------->MYC3 <---------ANAC58  ------>ZmHOX2a(2)   ------>ZmHOX2a(1)--------->ALFIN1 ---MYB52(1)  ------->MYC2 <---------ANAC58  ===========================HOX2a_HOX2a  --------->ALFIN1   gttgttattaccaccacatgcatgatttggcttgcctttgtctctgatcgtagtaatgtccggtttcctcatcatcattttggactggtggagccttttt  2578100                                                                                                 <---             <---------ARR14(2)                                                                 <----             --------->ARR14(2)              ---------->DOF2                               --------->CCA1(2)             <---------GLK1(2)            --------->ANAC58             <---------ANAC46   --------->ARR11(1)       --------->ZAT14                    --------->ANAC58       --------->ATHB12        --------->YAB1       <---------ZAT14                --------->ANAC58          <---------YAB1   <----------DOF2<----       <---------ARR14(2)             --------->ANAC58        --------->CCA1(2) <---------ANAC58----- --DOF2--------->ARR14(2)      ----------->GT1           <------ZmHOX2a(1)      <---------ANAC58-----   gaagaagagtatacagatttgaaattggagagattgtaagaagcaaggaaagatggagaggatgatatgatttgtggggattgctttggaatgatacgaa  2578200            ----------->HVH21          --------->CCA1(2)         <---------ARR14(2)         --------->ARR14(2) --------->ANAC55(2) <---------ANAC58                                    <---------WOX13(1) <---------ANAC58                                   <------------CBF --------->ANAC46                                   *TSS  <---------MYB46(3) -------TaMYB80                               <-------GAMYB -----ARR14(2)                               <---------MYB46(3) -----KAN4(2)                                --------->MYB52(2) <---------ANAC46 ---->ARR14(2)          ---------->DOF2  <---------ZAT6--------->ATHB12 ----->TaMYB80  ---------->DOF2   ---------->DOF2 <---------TOE2(3)   tatgcgtaatggatatgacaaagagagaaagagatagaaagtagtgtttgttgagattgatgggtagagtagagagagtctctaatagagagagacagag  2578300                                                                            --------->ARR11(3)                                                                            <---------ARR11(3)                                                                       <---------AHL20(2)                                    <------MYB83                   --------->AHL20(1)             <--                                    <------MYB46(1)                <---------AHL20(2)          <-----                                   <---------MYB46(3)         <---------AHL20(2)   <---------MYB52(1)                         --------->ANAC58                     --------->AHL20(2)  --------->TOE2(3)                         --------->ANAC58     <---------AHL20(2)   --------->AHL20(2)       ---------                     >>>>>>>>>TBF1--------->ALFIN1   <-----------GT1   --------->AHL20(2) --------->YAB1   agaagatgaaatggggatgtgaagaagaagcaagaggtgggtcttcatttttttgttacaaaatataaataaaataaatgtcttcgttagaaacatgatg  2578400                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   ==                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           --------->SPL7                                                                                           ----------                                                                                          --------->ANAC46                                                                                          <---------ALFIN1                                                                  ===================================                                                                  ------>MYB46(1)        --------->LBD16                                                                  ------>MYB83          --------->ANAC58                                                                  -------->P            --------->ANAC46                                                      --------->ANAC58 ============================== -------WOX13(1)       ------->TEIL                   --------->ANAC58 <----------DOF2  <---------ALFIN1 ----YAB1    ----------->GT1               <---------ZAT6       --------->AtMYB61       --------->ANAC58 >ICU4     <---------ZAT14   ---------->DOF2   ---------->DOF2  <---------MYB59        <---------LBD16   atagacttgtgagtgaagaaaaatgtatcgaaaaagactggtttagagtcaaagacaagaacaagaccaacctctttctctgtctcatccccgcaccaca  2578500 -------MYC4 ------>MYC3 -------MYC2 ------>MYC2 ------>MYC4 -------MYC3 --------O2 ------->O2 ------->TGA1a ------->ANAC55(2) --------ANAC55(2) --------TGA1a ==========================bZIP_DOF ---------OsbHLH66 ------ALFIN1 ----ALFIN1 -->ZAT14 ->AtMYB61 --ALFIN1 >ANAC46 ------OsCBT >ANAC58                         <-------TEIL >ANAC58             <---------ZAT14 ->RAV1(1)           --------->ZAT18                             --------->TOE2(3)      <----------ID1 ========MYC_MYB---------->DOF2 <<<<<<<<<<<<<<<<<LFY <------ZmHOX2a(2)   <-----------GT1--------->ANAC46 ========bZIP_DOF    --------->ZAT14  <---------MYB46(3)     <---------AHL20(2) <----------DOF2    <-   cacgtgtgtttgaagtatcaaagtatactaatacatacattggttatagtttacgatcagtattttttcttaaaatttccttctttctaaacgacaacta  2578600                                                                                              <------                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                        --------->MYB52(1)                                                                                      <---------ATHB12                    ----------->GT1                                                  --------->ANAC58                   --------->DAG2                                                    --------->ANAC58         --------->ZAT6                                                       --------->ANAC46<------         <-----------GT1                                                      --------->ANAC58-------       <-----------GT1      ----------->GT1                                   --------->ANAC58------- ----------GT1    ---------->DOF2           <---------AtLEC2                <-----------GT1------->GAMYB   ataaccaattttcactatctaaaagtaatatagtatatatactcttgcaaggaggcttattttgaagtaacttccattttacgacacaatcaaccgaatc  2578700          <---------AHL20(2)          <---------AHL20(1)          --------->AHL20(1)          --------->AHL20(2)         <---------AHL20(2)         --------->AHL20(2)     --------->AHL20(2)     <---------AHL20(2)  --------->AHL20(2) <---------AHL20(2) --------->AHL20(2) ---ARR14(2)           <----------DOF2 -->ARR14(2)       --------->ARR14(2) ---ARR11(1)       <---------ARR14(2)                                                           <---- --ARR14(1)        <---------GLK1(2)                                                           <----- -----ARR10       <------ZmHOX2a(1)           --------->ANAC58                               -------- >TEIL--------->AHL20(2) ----------->HVH21    --------->ANAC58                          --------->AHL20(2) -->GLK1(2)    <---------LBD16              ---------->DOF2---------->DOF2       <-------TEIL<-------   taaataaataaataaattcaggattctttgacagaaatatagcatcaaaagccaaacacatcaaagccaaacttaagaataggtgcaagataaaatcatc  2578800  Previous    Next  AGI:  At3g08500.1    Description:  MYB83 (myb domain protein 83); DNA binding / transcription factor. similar to AtMYB46/MYB46 (myb domain protein 46), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G12870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21914.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 2576800    to: 2578252    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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