Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ANAC58                             <<<<<<<<<<ABI3                             >>>>>>>>>>FUS3     <------MYB46(1)                             <<<<<<<<<<FUS3    --------->MYB59                <---------AHL20(2)                            --------->AtLEC2   <---------------AtSPL8         --------->AHL20(2) ---->ANAC46    --------->TOE2(3)              --------------->AtSPL8      --------->ARR11(3) ---->ANAC58    --------->TOE1(3)       <-----------------AGL3             <---------ARR11(3) ---->ANAC58   ----------->GT1  --------->ANAC58<------MYB83        <---------YAB1        ---------->DOF2   gccaaaactcaagctcatcgttaaaactccatgcatgcatcaacaaaatttggtactagcttagtagattattagaagatttatattactcgaaaagaaa  2574800                                                                                              -------                                                                                              ------>MYB46(1)                                                                                              ------>MYB83                                                                                            ---------                                                                                            <--------                                                                          ------>MYB46(1)   <--------                                                                          -------->P        ---------                                                                          ------>MYB83      <--------                                                                        <---------MYB111(1) <--------                                                                      ------>MYB46(1)      --------->MYB46(3)                                                                      -------->P      <---------ARR14(2)            --------->At4g35610    --------->ANAC46                   ------>MYB83<------ZmHOX2a(1)            <---------At4g35610    --------->ANAC58                 <---------MYB111(2) --------->MYB46(3)         <------ZmHOX2a(1)         --------->ANAC58 --------->At4g35610 <---------MYB59<------ZmHOX2a(2)   <------ZmHOX2a(1)          <----------ID1     ------>ZmHOX2a(1)  <---------ALFIN1  --------->ARR14(2)   tgttaggatgaggaggctgagtagcaatgtagaagacaagcaatgccactcctaagctaaacaaaaacctccaacctacttggaggacgatccaccaact  2574900                                                                                                  ---                                                                                                 <--- ->P                                                                      <---------GLK1(1)    ------ >MYB46(3)               <---------ICU4                                --------->ANAC58     <-------- -MYB111(1)             <---------ATHB12                               --------->ANAC58 --------->HSFB2a(2) -MYB111(2)            ------>MYB46(1)                         <---------HSFC1(2)       <---------HSFB2a(2) >AtMYB61           <------NtERF2       ------>ZmHOX2a(1)      --------->HSFC1(2)      <---------LBD16 -ALFIN1--------->PCF5 ------>MYB83    --------->TOE2(3)       --------->HSFB2a(1)    <---------LBD16 -MYB55(2)         ------>NtERF2--------->YAB1            <---------LBD16 --------->GLK1(1) ---------   cgaattggaggtccccaatggcaccaatcttttctcatcatcctcatacaagaagttgttttcggagtttctcaagaaatctgagtacctcgggaattca  2575000                                       <---------LBD16                                <------ZmHOX2a(2)                          <-----------HVH21                      <----------CDC5 <---------LBD16                      <------NtERF2 --------->ARR14(2) -------->HVH21      --------->At4g35610   <---------ARR14(2) ------WOX13(1)      <---------At4g35610--------->LBD16       <-----------HVH21 --->ATHB12         <---------ANAC46<---------ARR14(2) <---------ARR14(2)            <----------DOF2 -GLK1(1)  ============================HOX2a_HOX2a     --------->ARR14(2)    --------->WRKY12 >GLK1(1)  <------ZmHOX2a(1)  --------->At4g35610<---------GLK1(1)--------->AtLEC2<------ZmHOX2a(1)   ttgacgctggataggaccaatggcgctgagtcagatcgaatcggggattggaattcggattcagggtcatggaaaaccgttgaaggactttggacgaagt  2575100                                                                        <---------MYB46(3)                                                                      <-------GAMYB                                                   <---------YAB1     <---------ANAC58              ------>ZmHOX2a(1)             --------->TOE2(3)         <---------ANAC58           --------->PCF5               <---------WOX13(1)      <---------AHL20(2)        <---------AtMYB61    <---------AHL20(2)   <---------AHL20(1) <------MYB83            --------        <---------ZAT6      --------->AHL20(2)    --------->AHL20(1) <------MYB46(1)       <---------YAB1   agtttgagtagtggtcctctcttctctccattaaataagctaattgccttaatatttttgttctgtttatttggttgtttttgtgagtgtgtgatgaaag  2575200                                                       <------MYB46(1)                                                       <------MYB83                                                     <---------WOX13(1)                 ----------->GT1                                                    <------------CBF                 --------->ALFIN1                                                   --------->ATHB12                <---------ANAC46                                                  <---------YAB1             --------->ATHB12                                           --------->WOX13(1)               --------->AHL20(2)                                         ------------>CBF                   <---------AHL20(2)                 <-------TEIL          --------->GLK1(1)                 --------->ATHB12     <---------YAB1  *TSS             --------->ARR11(3)                --------->ICU4  <---------ANAC46 -->DOF2 ------>ZmHOX2a(2)            <---------ARR11(3)     <---------CCA1(2)<------------CBF ------   aaactatatgatcgataagttcatatatagtaacgagagagatatcaatcttatgattggtgtctatctctgaaatgatttattgatgtggagtaaatta  2575300                            <---------ICU4                            <---------AHL20(2)                            --------->ATHB51                           --------->ICU4                        --------->AHL20(1)                        --------->AHL20(2)                        <---------AHL20(2)                       <---------AHL20(2)                                     ---------->ID1                       --------->AHL20(2)                           <---------bZIP60(2)                    --------->AHL20(2)                      --------->ANAC58 <-------GAMYB                 --------->TOE1(3)                          --------->ANAC58<---------MYB46(3)                 --------->TOE2(3)                          --------->ANAC46--------->MYB52(2)                ----------->GT1                    --------->YAB1   <---------ANAC46                <---------ZAT6        <---------ANAC46  --------->ZAT6--------->ALFIN1             <- ---->DOF2 --------->STY1(2)--------->AHL20(2)    <---------YAB1 --------->ICU4                    <-   agcactactatatagctagcgttaaattaattatttcatggtggagaaaactataataacacaagtcatgatgtgggtttgttgttcttgtaatccaatt  2575400                              <-----------GT1                          <---------ICU4                          <--------ATHB1                          <--------HAHB4                          --------->ATHB51    --------->WOX13(1)                          -------->HAHB4     <---------ICU4                          --------->YAB1     --------->YAB1                         <---------ATHB51    -------->ATHB1                         --------->ICU4     <---------ATHB12                         <---------YAB1    ------>MYB46(1)                       --------->YAB1      ------>MYB83              --------->AHL20(2)     --------->ZAT14                                              ---              <---------AHL20(2)--------->MYB46(3)    --------->TOE2(2)               <---------AHL20(2) ----------->HVH21  --------->ANAC55(2)   --------->WOX13(1) --------->At4g35610 <---------ARR11(3) < --------ANAC58     ----------->GT1--------->ANAC46   --------->TOE1(2)<---------AHL20(2)   --------- --------ANAC58     <---------ANAC55(2) --------->MYB46(3)<------ZmHOX2a(1)      --------->ARR11(3)<-   tccttgacgcttaagtttaaataagtaataattaaccactgaaccaatcattcaaacctaggaagctctatatttatacaaacgatatttgatttcttaa  2575500                                                                           <---------------AGL15                                                                           --------------->AGL15                                                                          <-----------------AGL3   --                                                                  <--------ATHB1                  <--                                                                  --------->AHL20(2)           <-----                                                                  <---------AHL20(2)           ------                                                                  --------->ATHB51        --------->HSFB2a(2)                                                                  <---------ICU4          <---------HSFB2a(2) ------>AHL20(2)          <----------DOF2           --------->AHL20(2)  <-----------GT1  <---------LBD16 -----------GT1      <---------AHL20(2)           --------->AHL20(2)  <---------AHL20(2)<---------LBD16 >TOE2(3)   <----------DOF2                <----------DOF2       <---------ATHB51--------->HSFB2a(2) --------AHL20(2)------>ZmHOX2a(1)     --------->REM1(1)         <---------ATHB12<---------HSFB2a(2)   ttttatcttactaactttcctattttatctttagtttggcttcaactttcatttttatatatgttcaataatttaaactatttttagaacctcgggaagt  2575600         <---------ARR11(3)         <---------AHL20(1)         --------->AHL20(1)                                                      --------->WOX13(1)   --------->ANAC58                                                         --------->LBD16   --------->ANAC58                    <---------ZAT14                     --------->LBD16   --------->ANAC46                    --------->ZAT14                     --------->ANAC58 ------->YAB1         <-----------RAV1(1)                                  --------->ANAC58 -----TEIL        <---------DAG2--------->YAB1                   <-----------RAV1(1)--------->YAB1 ----HSFC1(2)     <----------DOF2      --------->ZAT18 ----------->GT1     --------->ANAC46         < --->HSFC1(2)   ------>ZmHOX2a(1)  <---------ICU4     ----------->GT1 <---------ALFIN1    ------->GAMYB   ttcataagcaaaatattcctctttttgtggccattcataagtgctctgttaacatgagggaaaaaacatgttgcaccccgaaacaatcacaaccgaaatc  2575700  Previous    Next  AGI:  At3g08490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42860.1); similar to unknown [Populus trichocarpa] (GB:ABK92537.1) Range:  from: 2573950    to: 2575221    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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