Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ANAC58                                                                 --------->ANAC46                                                                 --------->ANAC58                                                            --------->ZAT6                                                          <---------ARR11(1)                                                          --------->ARR11(3)                                                          <---------ARR11(3)                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                    --------->ANAC46                                                  --------->At4g35610                 --------------->AGL15            <---------At4g35610           --------->ARR14(2)                   --------->bZIP60(1)           <---------ARR14(2)            <---------YAB1  <---------CCA1(2)               <---------ARR11(3) -YAB1   --------->GLK1(2)   <---------At4g35610<---------bZIP60(1)           <---------YAB1   <-----   gaagtcttgagaatatttgctctgtttagttagcacatcgataatttttgacatcagccatatctctacgcatactaagtatcatttccaagatagttta  2563600                                                            <---------AtLEC2                                                       --------->ARR14(2)       <----------ID1                <------ZmHOX2a(1) ------->TEIL  ---------->DOF2         <----------DOF2      --------->ZAT6   <---------AtLEC2         ----------->GT1 ------GT1         --------->ZAT6   ----------->GT1    <---------ARR14(2)            <---------TOE2(3)   ccatcaaagacgacaaaattcccactagctttgttatgaggaaacaataactctatgtatatgcatgcatgaaaacatttttagatttatgtagtaaaat  2563700                  --------->ANAC58        --------->ANAC58                  --------->ANAC58        --------->ANAC58           ----------->GT1              --------->TOE2(2)                       <---------ARR11(3)         <---------ZAT14                --------->TOE1(2)            ====================HOX2a_HOX2a         --------->ZAT14               --------->MYB46(3)            ------>ZmHOX2a(1)     --------->ZAT6 --------->YAB1    -------->P               --------->ARR11(3) ------>ZmHOX2a(2)   <---------ARR11(3)            --------->ZAT6                <-----------GT1  --------->ARR11(3)   --------->ARR11(3)          --------->YAB1                 <---------ICU4<----------DOF2   ttcaatatctctacagtaacaagcatatatcaataacactaaccaaggaaaactcattctctaattatctcctctcatctttgatcttctcaatattgtc  2563800                                                            --------->ZAT14                 ---------                                                            <---------ZAT14                 ---------                                                          --------------->AtSPL8     ----------->RAV1(1)                                                         <---------At5g28300        <----------ID1                   ------>ZmHOX2a(1)                 <---------ICU4            ---------->DOF2          --------->TOE2(3)                      <-----------GT1      <-----------GT1--------->RAP2.6(2)          <----------DOF2                       --------->AHL20(2) <---------ICU4   --------->ZAT18<-     <---------MYB59                    --------->AtLEC2<-----------GT1    ------>MYB46(1)  <--------    --------->At4g35610              <---------YAB1 <---------------AGL15  ------>MYB83    --------->RVE1(1)    <---------At4g35610            <-----------GT1  --------------->AGL15<---------MYB59   --------->CCA1(1)   tcatttagctaactttagttcctctcaatttctcttattaccatacaaaatttactaattactgtacaaaaattaccaaataaaaggccacaaatatctt  2563900                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                                <------MYB83         --------->ANAC58                                       <------MYB46(1)         --------->ANAC58  <---------ARR14(2)                   <---------DEAR3(2) >ARR11(3)   --------->ANAC58                              --------->DAG2 >AHL20(1)   --------->ANAC58                             ---------->DOF2 -----ZmHOX2a(1)           --------->ARR14(2)         <------ZmHOX2a(1)  --------->ZAT14 -ARR11(3)   --------->ANAC46                       <---------TOE2(3)    <-------TEIL               -   aggaagaaatgaagcaaggcacaagtgccaatacgagattagagagcatgaattaaggagaaaagtcggtttcggttcagtaagacagacagacaaaatc  2564000                                                                                                  ---                                                                                                  ===                                       *TSS      <---------ALFIN1                                <---                                    <---------GLK1(1)            <----------DOF2                 ====                                    --------->GLK1(1)            ------>ZmHOX2a(1)              -----                               --------->ANAC55(2)           <-----------GT1                    <----            <-----------HVH21  <---------ANAC55(2)      <----------DOF2              <---------TOE1(2)  <---------MYB52(1)           --------->ANAC46 --------->ZAT14<---------ICU4 --------->DAG2    <---- -------->ATHB12         <----------DOF2 ------>ZmHOX2a(1)  <-----------GT1  ---------->DOF2    -----   catcgttggggtccagtcacattacctctttctacgtgatttcctctctctccactcgcttttaatcctttcacttgtataaagtcgtagcatctcgaga  2564100                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                 <---      ------>ZmHOX2a(1)                                                                          <--- --->ZmHOX2a(2)                                                                                  <--- ============HOX2a_HOX2a                                                                         <--- ---ZmHOX2a(2)                      <-----------GT1                                   ------->GAMYB<- ============HOX2a_HOX2a       <---------DAG2     <---------At4g35610              --------->MYB52(1) ---->ARR11(3)           <---------LBD16      ----------->HVH21                    ----------->RAV1(1) -----ARR14(2)           --------------->AtSPL8   --------->At4g35610       <------ZmHOX2a(1)    <--- -----ARR11(3)      <---------GLK1(2)       ----------->RAV1(2)          --------->HSFB2a(2)     <--- ---->ARR14(2) --------->TOE2(3)<----------DOF2---------->DOF2           --------->LBD16       ------   tcgtcttcctctcacaatctcaaattcttcggaccttttctctctcccctgaagctcccctcactcactcttctccgaggaagaacaacagagacaatgg  2564200            <---------YAB1       --------->ANAC58       --------->ANAC58     ---------->DOF2                                    --------->ZAT2   <---------HSFB2a(2)                             <---------HSFB2a(2) ---------ARR14(2)                             <---------At4g35610 -------->ARR14(2)                             --------->At4g35610 ------->ATERF1(1)                          <---------At4g35610                               <------ -------MYB46(3)                           --------->ALFIN1                           --------->ANAC58 -------DEAR3(2)                        <-----------RAV1(1)  ------>ZmHOX2a(1)     <---------ZAT18 ------DEAR3(1)        ------>MYB83     ===============================RAV         --------->ZAT18 ------DREB2C(2)       ------>MYB46(1)  --------->ALFIN1--------->GLK1(1)         --------->ANAC58 ------ANAC46        <---------MYB59  <-----------RAV1(1)  ----------->RAV1(2)    --------->ANAC58 ------ANAC58       XXXXXXXXXXXXXXXXXXXX>MIR779.1  <---------LBD16        >>>>>>>>>GT-1       ------- ------GAMYB--------->ICU4          <---------At4g35610 --------->At4g35610      <---------ZAT18  --- ------ANAC58<---------ICU4         --------->At4g35610 <---------GLK1(1) ---------->DOF2     ------- ------RAP2.6(2)  <-----------GT1   ----------->RAV1(2) <---------At4g35610     <---------ANAC46  --- ------>AtMYB77<---------YAB1       ================RAV <---------ZAT2 ----------->GT1--------->ANAC58   cggttcccaaagccattattctacctatcttgctactcatctgtggtgctgctctcggagctcctgcttctgaaggtaaatcgcgcgcacacacacacac  2564300                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                -----                                                         <---------HSFB2a(2)                    -----         <---------TOE2(3)                               <---------HSFC1(1)                     <---- ---ALFIN1                                               --------->HSFB2a(2)                  ------- -->ANAC58                                        <-----------------AGL1                  --------->ANAC58 ------>ANAC58                       <----------DOF2    <---------LBD16                   --------->ANAC58 -->ANAC58     <---------ZAT14      <---------ANAC58  --------->GLK1(2)                 ---------->DOF2 ------>ANAC58 --------->ZAT18      <---------ANAC58 <---------GLK1(2)           <---------YAB1 -----   actcactgtctatggtttgcactggtttgctctgttttgcttttgacaagttttcgattctggaagatgggtcttctctacttgtgattctaaagcaaga  2564400        --------->HSFB2a(2)        <---------HSFB2a(2) ---------->ID1 ------MYB46(1)                                   <-----------GT1 ------MYB83                                  --------->ARR11(3) --------AtMYB61                              <---------ARR11(3) ----->ARR14(1)                         <------ZmHOX2a(2)                  --------->ARR11(3) ----->CCA1(2)                          --------->CCA1(2)                  <---------ARR11(3) -----ARR11(3)                         <---------AGP1                 <---------TOE1(3) ---->ARR14(2)                         --------->AGP1                <-----------RAV1(2)  <---------HSFC1(2) ---->ARR11(3)             --------->YAB1------>ZmHOX2a(2)      <---------------AGL15     <---------HSFB2a(1) -----ARR14(2)             --------->TOE2(3)<---------TOE2(3)   ===================================== ---->ARR10           <-------TEIL     --------->ARR11(3)       --------------->AGL15     --------->HSFB2a(1) ---->ARR11(1)  ---------->DOF2        <---------ARR11(3)    <-----------GT1              --------->HSFC1(2)   tttggtgtttttggaagaaaaagattcaatcttagtctctagatctaagatttatctctctgtttacttcttcaggttatcttcgtaatggaaacttcga  2564500  Previous    Next  AGI:  At3g08030.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40802.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946) Range:  from: 2564039    to: 2566008    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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