Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------CCA1(2)                            <---------YAB1      --------->ANAC58                                 <-----------GT1      --------->ANAC58                              --------->ARR11(3)      --------->ANAC46                              <---------GLK1(2) --------ICU4                                       <---------ARR11(3)                       -------- ------->YAB1                                   ---------->DOF2                            <---------WRKY18(1) -------ATHB12                                --------->ANAC58                          --------->TOE1(3) ------>ICU4<---------ARR14(2)                --------->ANAC58<-----------GT1           --------->TOE2(3) -------YAB1--------->ARR14(2) <---------AHL20(2) ----------->ARR10               --------->At4g35610   atgataacaagccatatccaagagtgagtgtatatatatgttttcaacaagaaagattttcattttacaagatgactcagaataagcttaccttgactct  2523800                                                                                                   <-                                                                                                 ----                                                                                          ---------->DOF2                                                                                        <------------                                                                                        -------------                                                                                       --------------                                                                                       <-------------                                  ----------->RAV1(1)                                  --------------                         --------->At4g35610                                           <-------------                         ----------->RAV1(2)                                           --------------                       <---------ALFIN1                                                --------------                      <---------At4g35610                --------->At4g35610           <-------------                    --------->ANAC46                 <---------ARR11(3)            --------->ARR14(2) ->ZAT6 <---------TOE1(2)=====================RAV    --------->ARR11(3)      <---------ZAT18     <---   aatcgcctcgtaagttccatagacagcacctgaacacaacaaaaacaagtcttaatatcatctccataaccaaaacccgtgcccaaattcccaaaatcgg  2523900                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                       --------->RRTF1(2)                                                                                       --------->RAP2.6(2)                                                                                       --------->RAP2.3(2)                                                                                       --------->RAP2.3(3)                                                                                       --------->DREB2C(2)                                                                                       --------->RRTF1(3)                                                                                       --------->ATERF1(2)                                                                                       --------->DEAR3(1)                                                                                       <---------ATERF1(2)                                                                                      --------->DEAR4(2)                                                                                      --------->RRTF1(1)                                                                                      --------->RAP2.6(1)                                                                                      --------->ATERF1(1)                                                                                      <------NtERF2--                                                                                      --------->ERF1<                                                                                      --------->RAP2.3(1)                                                                                      --------->ORA47(2)                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2---                                                                                     <---------RRTF1(1)                                                                                     <---------RAP2.3(1)                                                                                    <---------DEAR3(1)      ---------->DOF2                                                              <---------ZAT14---    --------->AHL20(2)                                                          ------>MYB83      ---    <---------AHL20(2)                                                          ------>MYB46(1)   --- ------TEIL                                                                    --------->MYB55(1) --- ----->ARR14(2)                                                               <---------MYB59     --- ---AGL15                                                                     <---------MYB46(2) <--- -->AGL15                                                                   ------->TEIL------>NtERF2 --->AGL1                                         <---------HSFB2a(2)       --------->SPL7       <--- ----AG                                           --------->HSFC1(1)     <---------ANAC58       <---- --->AGL2                                         --------->HSFB2a(2)   <---------------AtSPL3 <----- ----AGL1                                        <---------LBD16        --------------->AtSPL3 ------ --->AGL3                                      <-----------GT1       ---------->DOF2--------->ANAC46- --->AG --------->DAG2              <---------TOE2(3)           --------->GLK1(1)  --------->ZAT18--- ----AGL3             <---------YAB1--------->MYB59         <---------TOE2(3) <---------MYB111(1)<--- ------ARR14(2)     ----------->GT1 <---------TOE1(3)     ---------->DOF2<---------ANAC58<------NtERF2   atacatttaaaaggcgattagattgtaattctagggtttaggttttttttttccagaatgtaaaggaaatcgaaagcgtacctactgcgccgccaagagc  2524000          <---------At4g35610          <---------GLK1(1)      ------->GAMYB   ------>NtERF2   --------->MYB52(1)  <---------WRKY12  --------->DEAR3(1) <------NtERF2 --------->ATERF1(1) ------->RAP2.3(2) ------->RAP2.6(2) ------->ATERF1(2) ------->RRTF1(2) ------->RAP2.3(3) ------->DEAR3(1) --------ATERF1(2) ------->RRTF1(3) ----NtERF2 ------->DREB2C(2) ---------ATERF1(1) ------>RRTF1(1) ------>ORA47(2) ------>ATERF1(1) ------>RAP2.6(1) ------>DEAR4(2) ------>RAP2.3(1)                                                                      <------NtERF2 ------ATERF1(1)                                                                     --------->ETT(1) ------DEAR4(2)                                                                      <---------ANAC46 -----DEAR3(1) ------>NtERF2                                                  <---------ANAC58 ----ABI4(2)   --------->LBD16               <-----------GT1                  <---------ANAC58 --->ZAT18--------->At4g35610                --------->ANAC46                 <---------ANAC46 ----->NtERF2 --------->ANAC46              ---------->ID1<---------------AGL15    <-----------HVH21 ------>ERF1 <---------LBD16    --------->MYB52(1)        --------------->AGL15   <-----------RAV1(1) ------RAP2.3(1)<---------MYB52(1)         <-----------GT1<----------DOF2  <---------MYB52(1)       <   gccgccaacggcaactccggcagtgattttggccaaacagctatttttcgccatcttcttctttttagagacaattcgtttcttgtgtcggagaatagtt  2524100                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                            <---------WOX13(1)                    ---                ------>NtERF2                      --------->ANAC58                               ---            --------->ANAC46                       <---------ANAC55(2)                      ---------    <-------GAMYB <----------DOF2                  --------->ANAC46                         ---------  <---------TOE2(3)            <-----------GT1     --------->ANAC58    <----------DOF2    -----------  <---------TOE1(3)    <---------TOE2(3)       <---------ANAC58        *TSS   <---------REM1(2)  ---- <---------At5g28300   <---------TOE1(3)       <---------ANAC58    <-----------GT1     --------->ANAC58 -----------GT1--------->DEAR3(1) <----------DOF2  --------->ANAC55(2)<---------DAG2   --------->ANAC58   ttttacggttgccctcgccgcttttaaggtttttaactttgaagtttttgcttacgcaatggattgattttgcctttcgctacaaggtcgagccacaaca  2524200                                                     <------------CBF                                                    --------->ATHB12                                                 --------->ANAC46                                                 --------->bZIP60(1)        --------->TOE2(3)                        <---------O2        --------->TOE1(3)                        --------->O2        --------->ANAC55(2)                      --------->ANAC58                                ----       ----------------->AGL1                    --------->TGA2(1)                               ----       <-----------------AGL1                    --------->ANAC58                              ------ ------->P    --------->DEAR3(1)                 --------->bZIP60(2)                          ------- ----->MYB83  ------->GAMYB              <---------HSFB2a(2)                                  ------>MYB83 ----->MYB46(1)                          --------->HSFC1(1)                                   ------- ------->ORA47(1)                        --------->HSFB2a(2)                                  ------>MYB46(1) ------>DEAR3(1)                         <---------HSFC1(1)                                  -------- -------MYB46(2)         <---------ARR14(2)      <---------bZIP60(1)                         <------- ------>MYB46(3)         --------->ARR14(2) ---------->DOF2                      <-----------GT1----- ------>DEAR4(1)    --------->MYB52(1)  <---------LBD16                         --------->AHL20(2)<-- ------>DREB2C(2)  ----------->HVH21<<<<<<<<<CBP60g--------->TGA2(2)       --------------->AGL15<---- >ANAC46<---------ANAC55(2)         <<<<<<<<<SARD1<-----------HVH21        <---------MYB59  --------- >bZIP60(2)  --------->DEAR3(2)    ------>MYB46(1)<-----------TGA1        --------->ANAC46  <-------- >RAV1(1)------>ZmHOX2a(1)         ------>MYB83  <---------TGA2(1)    <---------DAG2      <---------- ----->DEAR3(2)   <---------MYB59<---------MYB59<-----------STF1      <----------DOF2    <-----------GT1   ccgacctgttccttaaccggcctaaccgattcgaaccaaatttctggaaagacgtcattggtttacttacagctttacccaatttactaatttacccacc  2524300         <---------ARR11(1)         <-----------ARR10         --------->ARR11(3)         <---------ARR11(3)         <---------AGP1         <---------ARR14(2)        <---------ARR14(1)        <---------CCA1(2)   <---------ALFIN1         --------->LBD16  <---------ZAT14           <---------RAP2.6(3) --->GAMYB                 --------->ATERF1(2)                                                     <- ----->ANAC46              --------->ANAC46                                                        -- --->ANAC46               <---------LBD16                                                      ------ -->MYB52(1)       ------>MYB83       <---------YAB1                                           <----- ->P   --------->LBD16    --------->RAP2.6(3)                                                  ------ ->MYB55(1)        ------>MYB46(1)   <---------AHL20(1)                                        ------ --ALFIN1--------->ARR14(2)<---------ATERF1(2)                                                 <----- ---->MYB46(3)  --------->ANAC46     <---------AHL20(2)                                       ------- -------ATERF1(1)<---------MYB59   <---------YAB1                                             <------ -----MYB55(2)<-----------GT1<------NtERF2                                             --------->MYB46(3) >MYB46(3) ------>ZmHOX2a(2)------>NtERF2                              <---------AHL20(2) ------>MYB83 -MYB55(2)<------ZmHOX2a(2)--------->RAP2.6(2)                        --------->AHL20(2)  ------>MYB46(1) -GT1<---------LBD16 <---------MYB52(2)                               <---------AHL20(2) ----------->RAV1(1)   cgactccaccggatcttaacccaactaagccggcactattattttttgttataagtttagcaaaatagacattttaatttcatttggaaaccaacaatta  2524400   <---------AHL20(1)   --------->AHL20(2)         --------->MYB52(2)   <---------AHL20(2)         --------->MYB46(2) --------AHL20(2)   --------->AHL20(2)                    ----------->GT1 ------->AHL20(2)   <---------AHL20(2)                    --------->YAB1 -->ATHB1        --------->AHL20(1)                      <---------TOE2(3) ---HAHB4        <---------AHL20(1)           <---------GLK1(2)                      ----------->GT1 --->ATHB51      <---------AHL20(2)           --------->ARR11(3)                 ---------->DOF2 --->AHL20(2)    --------->AHL20(2) <----------DOF2      <---------YAB1      --------->YAB1 ----AHL20(2) --------->YAB1  --------->MYB111(1)        <---------TOE1(3)  <---------AHL20(2) <----- -->ICU4<-----------GT1     <---------MYB52(1)<---------ARR11(3) <-----------GT1<---------AHL20(2)  < ---ATHB51--------->ZAT6   ------------>MYB.PH3(2)   <----------DOF2    <---------YAB1     <---------GLK1(2)   tttaaaaaatttacactaatattttaatgtgttagttactttgatatagattttggtttatggtaatttacattataaataataaaagggtcatattctt  2524500                                   ----------->GT1                          ------->TEIL                          --------->ATHB12                <----                    <---------AHL20(2)    ----------->GT1    --------->MYB52(2)                ------ -----DOF2         --------->AHL20(2)   ---------->DOF2    <--------P                          ------ ---------TOE2(3)  <---------AHL20(2)<---------ANAC46    ----------->GT1                ---------->DOF2   ttaagaatgttgtttatcgaattaaatgaatgttatatggtgtaaagaaaatttagagaaggttagttattggaaaaacatatgtttattcaaagggaag  2524600                       <------NtERF2                      <---------RAP2.6(3)                      ------>NtERF2                      --------->LBD16                     <---------ATERF1(2)                     --------->ATERF1(2)                     <---------RAP2.6(2)                     <---------ANAC46                    --------->RAP2.6(3)          --------->YAB1                  ---------->DOF2               <------ZmHOX2a(1)  <---------bZIP60(1) <---------WOX13(1) <---------LBD16   <<<<<<<<<<WRKY18                ------------------------>ANAC81 -----At4g35610   --------->ALFIN1    --------->ANAC58            --------->YAB1         <---------WRKY18(1) --->ANAC58 --------->AHL20(2)        --------->ANAC58     --------->At4g35610    ---------->DOF2 --->ANAC58 <---------AHL20(2)   --------->ANAC46          <---------At4g35610>>>>>>>>>TBF1--------->bZIP60(1)   ctaattgctcaaaaataaatgtgccggcaaaatccaagtcaagtcaaagcattagcaagttagcagaataagaaggagaagaagaaaagcatgacctcac  2524700  Previous    Next  AGI:  At3g07910.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO16842.1) Range:  from: 2523163    to: 2524171    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g07920.1    Description:  translation initiation factor. similar to EIF2 BETA (EMBRYO DEFECTIVE 1401) [Arabidopsis thaliana] (TAIR:AT5G20920.3); similar to EIF2 BETA (EMBRYO DEFECTIVE 1401) [Arabidopsis thaliana] (TAIR:AT5G20920.1); similar to EIF2 BETA (EMBRYO DEFECTIVE 1401) [Arabidopsis thaliana] (TAIR:AT5G20920.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21302.1); contains InterPro domain Translation initiation factor IF2/IF5, N-terminal; (InterPro:IPR016189); contains InterPro domain Translation initiation factor IF2/IF5; (InterPro:IPR002735); contains InterPro domain Translation initiation factor IF2/IF5, zinc-binding; (InterPro:IPR016190) Range:  from: 2524426    to: 2526235    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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