Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ZAT18                                      <---------ZAT18                                      --------->ZAT14                                      <---------ZAT14                                    --------------->AtSPL8                                    <---------------AtSPL8                                          -                          <---------AHL20(2)                                                        -                          --------->AHL20(1)                                                       --                          <---------AHL20(1)                                                      ---                          --------->AHL20(2)  --------->AHL20(2)     --------------->AGL15      -----               --------->ZAT14   ---------->DOF2              ---------->DOF2                ------->GAMYB       ---------->DOF2   --------->AHL20(2)   <---------AHL20(2)     <---------------AGL15  ---------  --------->AHL20(2)     <---------AHL20(2)  --------->AHL20(2)     ----------------->AGL3--------->MYB52(1) --------->AHL20(2)    --------->YAB1----------->GT1       ----------->GT1                <----------   aaaataaaaaaaagaactgaactaaaaataaatttgaaagtgtacaaatttataaaacagaaggtaaagaactaaatatagttgtatactattaacgacc  2510400            <---------ARR11(3)      <--------HAHB4      --------->ATHB51      -------->HAHB4      <--------ATHB1      <---------ICU4      --------->ATHB12      --------->YAB1     --------->ICU4     <---------YAB1   --------->YAB1 -------->YAB1 ---------->GT1                                          ---------->DOF2 ------->DAG2                                       ---------->DOF2      <---------ANAC58 ------->DOF2                                  --------->DAG2            <---------AtLEC2 ---->AtMYB61     <-----------GT1             ---------->DOF2       <----------DOF2 >MYB46(3)  --------->ARR11(3)         ------------------------>ANAC81   <---------ANAC58 -GT1<---------ATHB51         --------->AHL20(2)----------->GT1  <------ZmHOX2a(1)        <----------DOF2   aaaagtaataattagattttaaacaacttagattaaaaaaaaaaaaaaaaaagtaaaaggaaagagaggacttttgcatgagttggcaacttcttttttt  2510500                                          <-----------RAV1(1)                                       <---------AHL20(2)                                      <---------AHL20(2)                                      --------->AHL20(2)                                  <---------AHL20(2)               <---------YAB1                                  --------->AHL20(2)            <----------DOF2                                 --------->AHL20(2)             <---------DAG2                              <---------ICU4            <---------ICU4          ---------->DOF2     --------->AHL20(2)        --------->YAB1      <------MYB46(1)        <---------YAB1        --------->ATHB51         <---------YAB1       <------MYB83     <---------YAB1           <---------AHL20(2)       --------->ICU4   --------->ATHB12  <---------YAB1             --------->ICU4          --------->YAB1<---------AHL20(2)         <------   tgtttttattattaaagtcttaagaaaactaattatttaattaaatgttgctctgtcatcatcacactttttattgtttggttttgtattcttcccccat  2510600                                                      ------>ZmHOX2a(2)                                                      ========================HOX2a_HOX2a                                                     <<<<<<<<<GATA-1                                                     <------ZmHOX2a(2)                                                     <<<<<<<<<GATA-2                                                     <<<<<<<<<GATA-3                                                     <<<<<<<<<GATA-4                                                     =========================HOX2a_HOX2a                                                     <---------GLK1(1)                                                    <---------ARR11(3)                                                    --------->ARR11(3)                                                    <---------AGP1                                                   <---------CCA1(2)                                                 --------->HSFB2a(2)                                                 <---------HSFB2a(2)                                           <---------TOE1(2)     <---------YAB1                                           --------->SPL7      <---------ICU4                      --                                          ===================HOX2a_HOX2a   <<<<<<<<<TBF1         ----                                          ------>ZmHOX2a(1)    --------->YAB1                --------                   <---------ARR14(2)     ==================HOX2a_HOX2a------>ZmHOX2a(1)  <----------DOF2 <----------DOF2   --------->ARR14(2)    <---------SPL7       <---------ATHB12         <-----------GT1 ---ALFIN1<----------DOF2                --------->TOE2(2)  --------->WOX13(1)      --------->YAB1---   tttctttattctcttttgacaaatatgcaatttccaatctcatcctacggtctagatctctccaatcatcatccttcttcttccaatattcactttaaaa  2510700                                           <---------ICU4                                           --------->YAB1                                          <---------YAB1                                        <---------ICU4                                        --------->YAB1                    <--------ATHB1   <---------ICU4                    <---------ICU4   --------->ATHB51                    --------->ATHB51 <--------HAHB4                    --------->AHL20(2) <---------YAB1     <---------AHL20(2)              --------->YAB1    <---------AHL20(2)        ---------->DOF2    --------->AHL20(2)      --------->ANAC46    --------->ANAC55(2)    <---------AHL20(1)      --------->ANAC58    <---------ANAC55(2)        <---------DAG2    --------->AHL20(1)      --------->ANAC58 <---------YAB1                <----------DOF2         << --------->YAB1     <---------AHL20(2) --------->ICU4              --------->SPL7                <xxx ------->AHL20(2)  <---------YAB1    -------->ATHB1                ------->TEIL    ------>ZmHOX2a(1) ----->AHL20(2)    --------->ICU4   --------->ICU4               <---------SPL7<-----------GT1  <<<<< ->AHL20(2)      --------->YAB1     <---------YAB1             --------------->AtSPL8    *TSS <xxxxxx ------>YAB1 <---------ZAT6--------->LBD16--------->ICU4       --------------->AtSPL3   --------->YAB1   taaaaataaaatttagagataataatttccacgaaagaattattattattatgtgatgcctattcaacgtaccctcccttttttcctccatcatcttctt  2510800        <<<<<<<<<TBF1     <<<<<<<<<TBF1  <<<<<<<<<TBF1                                             <---------GLK1(2) <<<<<<<TBF1       ------>ZmHOX2a(1)                      <---------YAB1 xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      <---------At4g35610  <---------ANAC58 <<<<TBF1  <<<<<<<<<TBF1                              <---------ANAC58       <---------ANAC58 xxxxxxxxxxxxxxxxxsmallRNA(se3)                       <---------ANAC58  --------->YAB1   cttcttcttcttcttcttctcctctctctctctccatctcgatatcaaaaactcttgcttctgattctcttcattcatggcttcagagaagagtttcaag  2510900                                                                                <---------GLK1(2)                                                                           ----------->RAV1(1)                                                                           ------>NtERF2                                                                           <---------RAP2.6(3)                                                                          <---------ETT(1)                                                                          --------->DREB2C(2)                                                                          ----------->HVH21                                                                          --------->DEAR3(1)                                                                          --------->DEAR4(1)                                                                          --------->At1g77200                                                                         --------->RAP2.3(1)                                                                       --------->DEAR3(1)                                                                   <---------YAB1                                                                 --------->GLK1(1)                                                                 <---------GLK1(1)              -----                    --------->ETT(2)                            <---------ARR11(3)              -----                 <---------REM1(1)                              --------->ARR11(3)          -------->P       ===============================HOX2a_HOX2a           --------------------->WRI1      ------>MYB46(1)       <------ZmHOX2a(2)                   <------ZmHOX2a(1)--------->LBD16<---------DDF1   ------>MYB83       =====================================HOX2a_HOX2a    --------->LBD16--------->RAP2.3(3)  ------      <---------ARR11(3)                <------ZmHOX2a(1) <---------HSFB2a(2)   <---------ARR14(2)      --------->ARR11(3)       <------ZmHOX2a(1) <---------GLK1(2)--------->ARR11(3)      --------->DEAR3(1)  ---------->DOF2<---------ANAC46    <------ZmHOX2a(1)    --------->HSFB2a(2)   --------->ARR14(2)   aagagaaagatcaccgatgatgtagacggagtaggagtaggaggaggactagaatcccttcccgaagatatcatcgccgacatattctctcgcctaccaa  2511000                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                        <---------ARR11(3)                                        --------->ARR14(2)                                        --------->ARR11(3)                                        --------->AGP1                                        <---------ARR14(3)                                        <---------ARR14(2)                                       <---------GLK1(1)                                       --------->GLK1(1)                               <---------ARR14(2)                               <---------ARR11(3)                               --------->ARR14(2)                               --------->ARR11(3)                               <---------ARR14(3)                                            --------                               <---------AGP1                                           ----------->RAV1(1)                               --------->AGP1                                           ------>NtERF2                               <-----------ARR10                                       --------->ANAC46        --------->ZAT2         --------->ARR14(3)                                      <---------ETT(1)  ------>ZmHOX2a(1)           <---------CCA1(2)                                        --------->LBD16  =====================================HOX2a_HOX2a              <---------CCA1(2)     --------->LBD16 ->MYB46(1)          <-------TEIL------>ZmHOX2a(2)          <-----------HVH21   <<<<<<<<<TBF1-------- ->MYB83<---------ZAT2--------->MYB52(2)<---------AGP1  <---------ALFIN1     <<<<<<<<<TBF1 ---------- --->WOX13(1)     <---------YAB1<------ZmHOX2a(2)      <---------REM1(2)  <<<<<<<<<TBF1----------->HVH21   tctcctccatagctcggcttatgttcgtttgcagatcttggagatctgttttgactcaacacggtcgtctctcttcttcttcttcttccccgacaaagcc  2511100                                  ------->GAMYB                               --------->MYB52(1)                                                   -                            --------->ANAC58                                                        -                            --------->ANAC55(1)                                                    --                            --------->ANAC55(2)                                                    --                            --------->ANAC46              --------->At4g35610                    <---                            --------->ANAC58            --------->YAB1               <---------ARR11(3)        <-----------HVH21   <---------ANAC55(2)       ------>MYB46(1)              --------->ANAC58<- ->ANAC58        --------->ARR14(2)                   --------->MYB52(1)           --------->ANAC58<- ->ANAC58<---------ZAT14 <---------ARR14(2)           ------>MYB83    --------->ANAC58           ---- >DOF2  ------>ZmHOX2a(1)--------->ARR14(2)    ------>ZmHOX2a(1)      --------->ANAC58           <---   atgtcttctccttcactgcgattcgccaatacgcaacggtcttcacttcctcgacctatcagaagaagagaaacgcatcaagaccaagaaattcacatta  2511200                          <---------ANAC58                          <---------ANAC46                          ===============================MYC_MYB           <---------ANAC58      --------->HSFB2a(1) <---------bZIP60(2) <-------TEIL             <---------TGA1a -------->ARR14(1)        <---------O2 -------->CCA1(2)         --------->O2 ------->ARR14(2)         <---------ANAC58 ------->ARR11(1)      ----------->HVH21 ------TOE2(3)    <------NtERF2           --------->MYB52(1)                               <--------- --------ARR14(2)--------->LBD16 <------MYB46(1)        <---------MYB52(1)                --------->TOE2(3) --------GLK1(2)<---------ANAC46 <------MYB83  <---------MYB52(1)                   --------->ZAT6 ------->ARR10 <---------LBD16 <--------P <-----------GT1       <---------GLK1(2)   --------->ANAC46 ------YAB1<---------ANAC58 --------->ALFIN1<------------MYB.PH3(1)               <-----------GT1   agattcgcatcttccatgccggagtttgacgtggtaggctcttgtaacggtttgctctgtttgtctgattctctctacaacgattcactctacctttaca  2511300  Previous    Next  AGI:  At3g07870.1    Description:  F-box family protein. Identical to F-box protein At3g07870 [Arabidopsis Thaliana] (GB:Q9SFC7); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G23880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24128.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 2510789    to: 2512400    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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