Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->TOE1(1)                                     --------->ARR14(2)                                     ------->TEIL                                    <---------ARR14(1)                                  <---------ANAC58                                  --------->ANAC55(2)                                  <---------ANAC46                             <----------DOF2                          <---------ARR11(1)                          <---------ARR14(2)    ------>ZmHOX2a(1)                          ------->TEIL   --------->ANAC55(2)                          --------->GLK1(2)    --------->TOE2(3)                          --------->ARR14(2)<---------ARR11(1)                         <---------CCA1(2)  <---------ARR14(2)                         <---------GLK1(2)  --------->ARR14(2)                         <---------ARR14(1)<---------CCA1(2)                    --------->DEAR3(1)   <---------ANAC55(2)                               --------->ANAC46            <---------ANAC55(2)   <---------ANAC55(2)                        <---------At4g35610 ------>GLK1(2)     <---------ALFIN1<---------CCA1(2)                 <---------ALFIN1     --------->ANAC58 -------ARR14(2)    --------->AtMYB61<---------ARR14(2)             ----------->RAV1(1)    --------->ANAC58 ------GLK1(1)     --------->MYB46(3)<---------ARR11(1)      <---------At4g35610           --------->ANAC55(1) ----->GLK1(1) <-----------HVH21  <---------ANAC58     >>>>>>>>>>GATA-1      --------->At4g35610   <-   aatccaattccatcatgtgtcaccaccgaatcttttgcgtatctcgtatccttactcgatttcagcatcgcaacacttctgcttaaccaaaacacgaaat  2490700                                                                         ------>ZmHOX2a(2)                                                                        --------->GLK1(1)                   ------>ZmHOX2a(2)                                    <---------GLK1(1)                  <------ZmHOX2a(2)  --------->LBD16                   <---------ARR11(3)                 <---------ARR11(3) --------->ANAC46               <---------At4g35610                 --------->ARR11(3)<---------LBD16              --------->LBD16                 --------->AGP1<-----------ARR10                <-----------HVH21         --------->LBD16       --------->ARR11(3)              <---------ANAC58<---------ANAC58        <---------ANAC46    <---------AHL20(2)                 <---------ANAC58<---------ANAC58       <---------LBD16      --------->AHL20(2)               ------>MYB83============================HOX2a_HOX2a       <---------At5g28300 --------->AHL20(2)            ------->TEIL  --------->ARR11(3)      --------->MYB52(1)   --------->YAB1  ----------->GT1   ------>MYB46(1)----------->HVH21 <------ZmHOX2a(1) --------TOE2(3) <---------AGP1<---------ARR11(3)  <-----------GT1<---------DEAR3(1)  <---------DEAR3(1)   taagaaatttacggagatagatctaacaattaaaatctacggagatagaaaataaactgtaccttccgtcgctgatctctgacttgattcggcgaaggag  2490800                                                                                          <----------                                                                                          <----------                                                                                         ============                                                                                         --------->TGA2(1)                                                                                         <---------ANAC58                                                                                         ============                                                                                         <---------TGA1a                                                                                         <---------bZIP60(1)                                                                                         <---------O2                                                                                         --------->O2                                                                                         <---------TGA2(1)                                                                                         --------->bZIP60(1)                                                                                         --------->TGA1a                                                                                         --------->bZIP60(2)                                                                                         <---------bZIP60(2)                                                                                         --------->ANAC58                                                                                         <---------ANAC58                                                                                         <---------ANAC55(2)                                                                                         --------->ANAC55(2)                                                                                         --------->ANAC58                                                                                        ----------->STF1                                                                                       <---------TGA2(2)                                                                                      ----------->TGA1                                                                              <-----------ARR10                                                                              --------->GLK1(2)                                                                              --------->ARR11(3)                                                       --------->ANAC46       --------->ARR14(2)                                                     <---------ALFIN1         <---------ARR11(3)  <--                        --------->PCF2            --------->PCF2              <---------ARR14(2)<----                   --------->TOE1(2)            ----------->HVH21        ----------->GT1<-----------STF1                   --------->TOE2(2)           <---------MYB111(1)  ------>ZmHOX2a(2) ----------->HVH21            --------->LBD16                   --------->ZAT2   --------->HSFB2a(2)   <-----------HVH21           <---------HSFB2a(2)                --------->At4g35610  <------ZmHOX2a(2)--------->LBD16           --------->HSFB2a(2)--------->YAB1  <---------At4g35610 <---------ARR14(2)<---------At4g35610          <---------LBD16    <---------YAB1   ----------->RAV1(2) --------->ARR14(2)--------->At4g35610      <---------GLK1(1)<------ZmHOX2a(1)    <---------ALFIN1   <---------HSFB2a(2)<---------LBD16 ---   agaggtcgatttcccagaaaacataggacccatgataacatgaacagcacctgacccacgacgttccagatcggagagaaaatctccggtgacgtcactg  2490900 <---------TOE1(2)     <----------DOF2 -HVH21              <---------HSFB2a(1) -TGA1               --------->HSFC1(2) ========================bZIP_DOF                                                                  <- ========================bZIP_DOF                                                          <-------TEIL -------ETT(2)       <---------HSFC1(2)                         <---------ANAC46        ----------->GT1 -------HVH21  --------->DAG2             <------NtERF2        <<<<<<<<<<MYB80--------->DAG2       <- ------>ETT(2)---------->DOF2     <------NtERF2         ---------->DOF2      ---------->DOF2       <-   tcgagggttttgatcaaaaaggaagctttgagagtcgccatggcagagacttgagaagaaaagatggtttgtagatgaaaaaagggagaagggttcaatt  2491000                                                      --------->GLK1(1)                                                    ------>NtERF2                                                   --------->LBD16                                                 <---------LBD16                             <-------                                                --------->ANAC46                             *TSS          --------->MYB59               --------->CCA1(2)  --------->LBD16 ----------->GT1   <-------          <---------TOE2(3)  <---------ANAC58 --------->CCA1(2)        --------->ANAC58      --------      <----------DOF2        <---------ANAC58<---------ARR14(2)        --------->ANAC46      -------- --------ANAC58              <---------ANAC46--------->ARR14(2)        --------->ANAC58    ---------- --------ANAC46     ----------->GT1    <---------ARR11(3) --------->HSFB2a(2)       <---------ANAC58 --------ANAC58    <---------AtMYB61   --------->ARR11(3) <---------HSFB2a(2)       <---------ANAC58-   tgcttgtggttttaggtagcgatggtgaatagcttgttgaagatatatatacgcggacatccagaagttgaacaaggaagaaaattgctggagaagattt  2491100      --------->MYB52(1)                                                                <---------AHL20(2)     --------->CCA1(2)                                                           <-----------ARR10   --------->YAB1                           <---------ICU4                       <---------ARR11(1) --ARR11(3)                                --------->AHL20(2)                    --------->GLK1(2) --ARR14(2)                                --------->AHL20(1)                    --------->ARR14(2) ->ARR11(3)                   <------MYB46(1)        <----------DOF2             ------->TEIL<------- ->ARR14(2)                   <------MYB83 <---------AHL20(2)                    <---------ARR14(2) ->ARR10                      ----------->GT1  <-----------GT1                  <---------ARR14(1) --------->DOF2      <---------YAB1       --------->AHL20(2)                    <---------CCA1(2)   gtcaaagataagggtttgaaattttgaatgggaggttttttcaaaaaaattacatctttggagggaaacagttttttagagcgaatctttttattttacc  2491200                                                                                       ------>ZmHOX2a(1)                                                                                       ==============                                                                               <---------AHL20(1)                                                                               --------->AHL20(2)                                   --------->AHL20(2)                          <---------AHL20(2)                                   <---------AHL20(2)                      --------->AHL20(2)             <---------LBD16--------->ANAC46                               <---------AHL20(2)      <-           --------->DAG2   --------->ANAC58                    <---------ANAC58      --------->TOE1(3)       --------->YAB1       --------->ANAC58                    <---------ANAC46      --------->TOE2(3)   <----------DOF2 --------->ZAT6 --------->AHL20(2)            <---------ANAC58<---------AHL20(2)<-- ----GT1  ---------->DOF2 --------->MYB52(1)        <---------GLK1(2) <---------AHL20(2)          ---   tctctcttttcataaagcggaacactataaacggaatttaaaaaaaaaaaaactgattttctattggcttattttttttaattaatttccttaatgtata  2491300                                                                 <---------ARR11(3)                                                                 --------->AHL20(1)                                                                 <---------AHL20(1)         <--------                                                                 --------->ARR11(3)     --------->AHL20(2)                                                            <---------YAB1      <-----------GT1         --------->ICU4                                   --------->YAB1      <---------ARR11(3) =====HOX2a_HOX2a                                         ----------->GT1     --------->ARR11(3) -----ZmHOX2a(2)                                         ----------->GT1      --------->AHL20(1) -------ARR11(3)    <-------MYC3             --------->AHL20(2) <---------AHL20(2)   --------->ANAC46 ------>ARR11(3)    ------->MYC3<----------DOF2          <---------YAB1    --------->AHL20(2)   gatcatatgaaatttttaaacatgtgtgtttaggctttgcaaacacattatttaagagaatgataaatatttttaaaaaatatatccacataaaatggta  2491400                                            <---------AHL20(2)                               --------                                     -------->ATHB1                        <---------HSFC1(1)--------                                     --------->ATHB51            --------->ANAC55(2)         <-------                                     --------->ATHB12            ----------->GT1             <-------                                     <---------ICU4              <---------ANAC55(2)  ===============                                    --------->ICU4       ----------->GT1   --------->HSFB2a(2) <----------DOF2                    <---------YAB1  ---------->DOF2        <---------HSFB2a(2) -------AtSPL8         <---------TOE2(3)    --------->AHL20(2)  <-------TEIL          <----------DOF2   ctggtttttggtcatatattccactaatgttttttagaattattgtttaaattagaaagtcgtaaattcgtaatattcgagaaaacaactttctcacttg  2491500                               --------->ZAT18                               <---------ZAT18                          <---------ANAC58   <-----------GT1        <---------ANAC58 ->TGA1a                <---------ANAC46    --------->ALFIN1 ->O2              <--------HAHB4         ================================RAV              <XXXXXXXXX --TGA1a           <---------ICU4     <---------YAB1                                      ------->TEIL --O2   ------>ZmHOX2a(1) <---------ANAC46<-----------RAV1(1)         <----------DOF2<---------At4g35610 ==bZIP_DOF       <---------ATHB12 <----------DOF2            ----------->RAV1(2)    --------->At4g35610   ggtttttatcctacaaacccatcattttgtgtgtgtgcttttgaatgtgggcttaaacccaaaaccctgaggctttttttggccctgagatgaacatgtt  2491600  Previous    Next  AGI:  At3g07800.1    Description:  thymidine kinase, putative. similar to thymidine kinase, putative [Arabidopsis thaliana] (TAIR:AT5G23070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41206.1); contains InterPro domain Thymidine kinase; (InterPro:IPR001267) Range:  from: 2489393    to: 2491093    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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