Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->YAB1        <XXXXXXXXXXXXXXXXXXXXMIR2112-5P    --------->ARR11(3)    <---------ARR11(3)           --------->MYB52(1)                                   --------->CCA1(2)   --------->YAB1               ------->GAMYB                                      ----------->ARR10 ----->MYB52(1)                --------->MYB46(3)      ----------->GT1         ----------->GT1      < ----MYB111(1)                 <---------MYB52(2)  <---------AHL20(2)        ---------->DOF2        < ----MYB46(2)          <---------ANAC58           --------->AHL20(2)      --------->AHL20(2)        < ----MYB52(2)          <---------ANAC58           <---------AHL20(2)      --------->YAB1            < ->MYB52(1)   <------------MYB.PH3(1)    --------->ARR14(2)     --------->YAB1--------->DAG2 --------   aacaatgatattgataactgtttttgcgaatcaactaacatcgtttccacatttaaattgtgactagcataaacaattaaaaagtaagatttgaaaatca  2476000  <---------MYB52(1) <-------GAMYB                                                                                  <---- ------MYB83                                                                                  <------ ------MYB46(1)                            <---------ZAT14                                   <------- ---------MYB46(3)                   <---------WOX13(1)  <----------DOF2                     -------- ---------DEAR3(2)        ------->TEIL     ---------->DOF2    <---------YAB1               --------->YAB1 ->GLK1(2)     ---------->DOF2     --------->ATHB12   <-----------GT1   <---------MYB52(2)<---------YAB1   gtcggttaactaattggaaaagaaaatgaaactaaattgattgactaaagtgattttttcttttcttattggccactaactcttattttgttttcattat  2476100                        <---------AHL20(2)                       <---------AHL20(1)                       <---------AHL20(2)                       --------->AHL20(2)                       --------->AHL20(1)                       --------->ARR11(3)                       <---------AHL20(2)                       <---------ARR11(3)                       --------->AHL20(2)                      --------->AHL20(2)                   --------->ANAC46                  --------->AHL20(2)             <---------AHL20(2)  ------------------------>ANAC81                <---------AHL20(1)         <---------ZAT14        -- ---------->DOF2 <---------ATHB12                --------->AHL20(2)     <---------ICU4           ---- -----TOE2(3)  ------>MYB83                --------->TOE2(3)    --------->AHL20(1)     <---------TOE2(3) ---ICU4       ------>MYB46(1)           <---------At5g28300   --------->AHL20(2)      <---------TOE1(3) --YAB1      <---------MYB59            <-----------GT1  --------->ANAC46   --------->ZAT14    <----- ->ICU4      --------->TOE2(3)     <---------YAB1--------->AHL20(1)  --------->YAB1  ---------->DOF2   ggaaaaagagtcaaacctaatcaaatatatttagtctatgatttaccctaataaaatatacacaaaaaaattgataactacagtacttaaaggtttttaa  2476200                        <---------ARR11(3)                        --------->AHL20(1)<---------AHL20(2)                        <---------AHL20(1)--------->AHL20(1)                --------->ZAT6     --------->HSFB2a(2)       <---------AHL20(2)    <---------AHL20(2)                      --------->AHL20(2)    ----------->GT1     --------->ARR11(3)--------->AHL20(2)   ---------->DOF2              ---------  ---------->DOF2----------->GT1   <---------HSFB2a(2)     <----------ID1                   <-------- ------->At5g28300--------->At5g28300  --------->YAB1  ---------->DOF2<---------AHL20(2)  <---------SPL7 ----->ZAT6   >>>>>>>>>WRKY18--------->AHL20(2)--------->AHL20(2)  <---------ARR11(3) <---------ANAC58 ------GT1 <---------ICU4--------->AHL20(2)   --------->AHL20(2)   --------->ARR11(3) <---------ANAC58   ctgtaaaagttaattttgacagtaaaaatatttatttctaaaaataaaataaaaaaaaaaagagaaaaagatttaatagcaaaaatggtcgtggtacgga  2476300                 <---------ANAC58                 <---------ANAC46                 <---------ANAC58                 --------->ALFIN1                --------->ATERF1(1)                <------NtERF2              <---------DEAR3(1)            --------->REM1(2)           --------->ALFIN1          ------->MYC2          ------->PIF5          ------->MYC3          <-------MYC3          <-------MYC2          <-------PIF5         <---------ANAC58         <---------ANAC46         <---------ANAC58         <------NtERF2        ------>NtERF2       <---------ANAC46       <---------ANAC58      <-----------------------TaNAC69(2)      --------->ATERF1(1)                                         --------->ANAC58                  *TSS     --------->ABI4(2)        --------->ALFIN1                    --------->ANAC58                  <     <---------ATERF1(1)    <---------ANAC58                     --------->DAG2         --------->PCF5     ------>NtERF2--------->LBD16    ---------->DOF2        <------ZmHOX2a(1)           --------->TCP11(2)    <---------DEAR3(1)      <---------ANAC46               ----------->GT1              --------->PCF2    --------->ALFIN1        <---------ANAC58   ------------------------>ANAC81          --------->TCP16(1) <---------DEAR3(1)      <------ZmHOX2a(1)     <----------ID1   ---------->DOF2        <---------TCP16(2) >SPL7<------NtERF2<------NtERF2   <------ZmHOX2a(1)---------->DOF2                   <---------ZAT18 -LBD16<---------ANAC58--------->ALFIN1    ---------->DOF2----------->GT1  <----------DOF2       ----   gagacggtggcgcgtggaggcgggagaggagcgtggaggaaaagaaaaagagccaaaagagaggaaaaaagcaaacactttcacttggtggacccatttg  2476400                                                                 <----------DOF2                                                              --------->ANAC58                  -----                                                              --------->ANAC58                  <----                                                              --------->ANAC55(2)         --------->ARR14(2)         <---------GLK1(2)                                    --------->ANAC46            <---------ARR14(2)      <---------ALFIN1                                       <---------LBD16         <---------At4g35610     --------->LBD16                                        <-----------GT1          --------->At4g35610 ---------ALFIN1                                  --------->TOE1(3)                --------->ZAT18  - ------>ID1            <---------CCA1(2)          --------->TOE2(3)          <---------MYB52(1) <----   tccctcccccagactctctcttctcatctctctctctctctctctcttcaaaccctaaaaattcacgcattttggcacagttaagttcgctgaatcccgt  2476500                                                                 <-----------RAV1(1)                                                               --------->ZAT2                                                               <---------ZAT2                                                               <---------At4g35610                                                               ----------->RAV1(2)                                                               --------->At4g35610                                                          ----------->HVH21         <-----------GT1                                                         ------>ZmHOX2a(2)    <------MYB83                                                         =====================================HOX2a_HOX2a                                                        <------ZmHOX2a(2)     <------MYB46(1)                                                        --------->GLK1(1)    --------->MYB111(1)                                                        <---------GLK1(1)    --------->MYB59<--------                                     <------ZmHOX2a(2) <-----------ARR10     --------->MYB46(2)      ------>ZmHOX2a(1)            --------->At4g35610 <---------AGP1        --------->MYB111(2) ---->ARR14(2)                --------->WOX13(1)       --------->ARR14(2)   <---------MYB55(1) -----MYB52(1)        --------->ANAC58             <---------LBD16<-----------HVH21<-----------GT1  < ----->ZmHOX2a(1)     --------->ANAC58 ---------->DOF2 <---------ARR14(2)   <--------P ------>ZmHOX2a(1) -----ARR14(2)     --------->LBD16 <---------At4g35610<---------CCA1(2)    <---------MYB52(1)      <-   tcctcttcctctgtctctctccccaagaaaatcactcagatcaaagctcaaatttcggatctcacagctgtcgcttcggtaggtatttcctcttcttttc  2476600                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                       <---------ANAC46                                                   ----------->HVH21                <---------WOX13(1)                                                 --------->ANAC55(2)      ----------->GT1----------->GT1   <----------DOF2  <---------ANAC58          <-------TEIL       <----------DOF2  --------->ATHB12  <---------DAG2    <---------ANAC58    --------->ANAC55(1)  <---------ANAC58     <---------ICU4 --DOF2      ----------->RAV1(2)        --------->ANAC46     <---------ANAC46     -------->HAHB4 ---------ALFIN1    <---------ANAC46    --------->ANAC58     <---------ANAC58    <---------YAB1 --------ALFIN1------>ZmHOX2a(1)        --------->ANAC58<-----------RAV1(1)      --------->ICU4   cccccctttctcttctcctgtttcgttttcgatttggattacacgaaattcatgtgatatgttgcttctttgggttttgtaaaatgattgctggtgaatt  2476700                                                                                 <---------KAN4(2)                                             --------->LBD16                 <---------TOE2(3)                           <---------WRKY18(1)                               <---------TOE1(3)<------                        <------ZmHOX2a(1) ------>ZmHOX2a(1)              <-------GAMYB        -------                        <XXXXXXXXXXXXXXXXXXXXMIR398A             ----------->RAV1(2)          -------                   <------ZmHOX2a(1) --------->HSFB2a(1)         <---------At4g35610         <-------             <---------ZAT14         <---------HSFB2a(1)         --------->At4g35610     <---------ATHB12             --------->ZAT18        <---------KAN4(2)       <-----------------AGL2     --------->WOX13(1)             --------->ZAT14        ----------->ARR10  --------->ATHB12 <---------MYB46(3) --------->WOX13(1)   gtattgggaattttgtgcagaggaaaggatgaccagagaacatcctcccgagcctcttgatttcttcatctggactgttgaggtatattcaatcaatcat  2476800                                                                                 <---------ANAC46                                                                                 <---------ANAC58                                                                                <------MYB46(1)                                                                                <---------MYB46(3)                      --------->YAB1                                            --------->MYB55(2)                      <---------ICU4                                           <---------AtMYB61                     --------->ICU4                                  <---------YAB1                     <---------YAB1                                --------->ATHB12          <-------                   <---------ICU4                                  <--------HAHB4<-------GAMYB   <----------DOF2 --------->YAB1              <---------ANAC46    --------->ATHB51        --------->YAB1 ---ICU4          <---------YAB1               <---------ANAC58    <---------ICU4<---------ANAC58   - -->YAB1          --------->ICU4               <---------ANAC58   <---------YAB1<------MYB83 -------- ->ATHB1        --------->YAB1           <---------TOE1(2)        --------->ICU4--------->MYB52(2)  < --ATHB12    <----------DOF2             <---------TOE2(2)<---------At4g35610 <--------P --------->GLK1(2)   tccttctttataagcctttcatgatgatcacttcttcaattcgcatgtttcttggaattgagctcttcattattagacttgttggttgcagaatcatgtt  2476900  Previous    Next  AGI:  At3g07760.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO41197.1); contains InterPro domain Sterile alpha motif SAM (InterPro:IPR001660); contains InterPro domain Sterile alpha motif homology (InterPro:IPR010993); contains InterPro domain Sterile alpha motif homology 2 (InterPro:IPR011510) Range:  from: 2476400    to: 2478260    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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