Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->TOE2(3)                      ----------->GT1                                               <-----------GT1                         <---------WOX13(1)                                             <---------GLK1(1)                       --------->YAB1                                            --------->ARR14(2)                       --------->ATHB12                                            <---------ARR14(2)                       <---------ICU4                                       <---------bZIP60(2)                           --------->ATHB51                                       ================================bZIP_DOF      -------->ATHB1                                       <---------ANAC46                              <--------ATHB1                                       <---------ANAC58                              >>>>>>>>>>AGL24                                       --------->O2                                  >>>>>>>>>>AGL22                                       <---------TGA1a                               >>>>>>>>>>AGL20 ----ID1                               <---------ANAC58                             <---------ATHB12 ---->GT1          ----------->GT1     <---------O2<---------MYB52(1)               <---------YAB1 --->GT1       ----------->GT1      ----------->TGA1           <-----------GT1      --------->ICU4 == >DAG2  <---------------AGL15       ----------->HVH21       <----------DOF2         <---------ATHB51 >DOF2 <-----------------AGL3    --------->AHL20(1)------>ZmHOX2a(1)              --------->YAB1   <-   aaaaaaaactcttaatatggtgagaaaatatgaaatatatgacgtggattttccttaggtctctttaactattttgtctgataacaataattggtttata  2467800                                                                          --------->YAB1                                                                         <---------YAB1                                                                       -------->HAHB4                                                                       -------->ATHB1                                                                       --------->YAB1                                                                       <---------AHL20(2)                                                                       <--------HAHB4                                                                       <---------ICU4                                                                       --------->ATHB51                                                                      <---------------AGL15                                                                      --------------->AGL15                                                                      <---------YAB1                                                                      ===============================                               --------->O2                           --------->ICU4                               --------->ANAC58                       <---------ATHB51                               <---------TGA1a                    ===============================HOX2a_HOX2a                               --------->TGA1a                   --------->TOE1(3)       <---------ARR14(2)      <---------ANAC55(2)               --------------->AGL15       --------->ARR14(2)      <---------O2                      ====================================    <---------ANAC58           --------->ANAC58                  --------->TOE2(3)                 <-    <---------ANAC46           --------->ANAC46             <---------HSFC1(2)                   ----    <---------ANAC58           --------->ANAC55(2)          --------->HSFB2a(1)                  <---   ---------->ID1    <---------ZAT6            <---------At4g35610------>ZmHOX2a(1)       ------>ZmHOX2a(2) ========================================bZIP_DOF           <---------HSFB2a(1)          --------->At4g35610 ---------DOF2  ------>ZmHOX2a(1)         <---------GLK1(2) --------->HSFC1(2)           <---------At4g35610   gctttggcgtatagcctccttaagtgttatctcacgtctcttcatattctgcttctctcagaaatttccttaattattatagcaaaatttgatctgcatt  2467900             --------->ANAC55(2)            <---------TOE2(3)           <-----------GT1                        <---------YAB1        <---------ICU4                   <---------ANAC58  --------->TOE2(3)     --------->AHL20(2)     <---------------AGL15                  --------->ANAC58  --------->TOE1(3)     <---------AHL20(2) <---------MYB52(1) --------->ATHB51        --------->ANAC58 ==============================================================MADS_MADS      <---------ZAT6 ==============================================================MADS_MADS    <---------ANAC46 ----------GT1--------->TOE2(3) <<<<<<<<<TBF1  --------------->AGL15      <---------ZAT14  <---------ARR14(2) ----->AHL20(2)       --------->TOE2(3)  <---------ANAC58     <---------AHL20(2) --------->ZAT18    < ------AHL20(2)     <---------YAB1   <----------DOF2    <------ZmHOX2a(1) --------->ZAT14  --------->ARR14(2)   taaaccctaatatttacgttatatcattaatttcttcttctttccgtttcttattttaggagaataatttgctcagtttagtgttcacaagcagagtcgc  2468000                         <----------DOF2                         ------>ZmHOX2a(1)                                                    <------               --------->GLK1(2)                                                      <---------TOE1(3)               --------->ARR14(2)                                                     <---------YAB1               <---------ARR14(2)                  <----------DOF2                    <---------TOE2(3)              <---------GLK1(2)                 <-----------GT1                   <----------DOF2  -- --------->MYB52(1) <---------ANAC58           <-----------GT1--------->YAB1   ------>ZmHOX2a(1)----- ---------REM1(2)   <---------ANAC58 ------>ZmHOX2a(1)     <----------DOF2 <-----------GT1    -------   tctaaacggtatgctcgattctgcgtcctttttttgctccttctatgttttatctttctagctttcatagttttttttttcctgcattatggtttcagcg  2468100                                           ------>ZmHOX2a(1)                                    --------->ATHB51                                    <---------ICU4                                    --------->AHL20(2)                                    <---------AHL20(2)                            <---------WOX13(1)                                 <---------ICU4                                  <------------CBF                                 <--------HAHB4                                  <---------ANAC58                                 --------->ATHB51                           --------->ALFIN1                                 --------->YAB1                     <---------AHL20(2)          ------>ZmHOX2a(2)     --------->ICU4 <---------ICU4      <---------AHL20(2)     <---------WOX13(1)       --------->TOE2(3)<---------AHL20(2)  <---------AHL20(1)    <------------CBF          --------->HSFB2a(2)             ------------>CBF   <---------ANAC58 ---At4g35610           <-----------GT1   <---------MYB59     <---------ATHB12  --------->ATHB12  --- ------->MYB52(1)<---------TOE1(3) <---------YAB1          <---------AHL20(2)  <---------YAB1     --- ------>RAV1(1)  <---------TOE2(3) --------->ICU4 <-----------GT1  --------->AHL20(2)           ----- -->At4g35610<----------DOF2  --------->YAB1   --------->AHL20(2)  --------->AHL20(1)        >>>>>>>>   acaacggattgatcgttttagggtttttacttccataattatttcctaattttttctatttttaatcaatttaatagagtgttgattgcgatgaagaaga  2468200                                                                                                    <                                                                                                  ---             <---------YAB1                                                                      ----            <---------TOE2(3)                                                                    <---         <---------WOX13(1)                                                                    ------       --------->ATHB12                                                                     --------- ------>ANAC58                                                               <---------ANAC58 ------- ------>ANAC58  <---------WOX13(1)                                           <---------ANAC58 <------ ----->DOF2--------->YAB1                                              <-----------GT1     <---------YAB1 >TBF1<---------YAB1--------->CCA1(2)                                <---------ATHB12      --------->ICU4   aagccattgtgattgatgatggatatacaaggtttatggtgaatgaaatgtctgaaaaaatcgatgttccaattatctgtcttgacgaagatgatgatga  2468300    ======================HOX2a_HOX2a    ------>ZmHOX2a(2)  --------->ARR11(3)  <---------ARR11(3) ---------YAB1 ------>YAB1       <---------------AtSPL8                                   --------->ANAC58 ----->ICU4        <------ZmHOX2a(1)                                        --------->ANAC58 ------YAB1        ===========================HOX2a_HOX2a             --------->ANAC58              - --->YAB1  <---------WOX13(1)                                         --------->ANAC58              < >YAB1     <--------P                                          --------->DAG2                       - -->ICU4<---------YAB1                              ----------->GT1 ---------->DOF2                -- ---YAB1<---------TOE2(3)              <------ZmHOX2a(2)      ---------->DOF2           <<<<<<<<<<<<<   tgatgatcttatggttgataaggagtacaacgtcttcttggatcatcttcgaagaggtgataagaaaagttcaagcactcgccttgaagttgacaatgga  2468400                            <---------ANAC58                            <---------ANAC58                        <----------DOF2                       ------>ZmHOX2a(2)          <---------ZAT2                      <------ZmHOX2a(2)           --------->ZAT2                      <---------RVE1(1)      --------->CCA1(2)                     --------->ARR14(3)      <------ZmHOX2a(2)                     --------->ARR14(2)     --------->AGP1                     <-----------ARR10      --------->ARR11(3)            <---------TOE1(2)               >>>>>>>>>GATA-2            <---------TOE2(2)               >>>>>>>>>GATA-4  ----------->HVH21  <---------ARR14(2)     >>>>>>>>>GATA-1            <---------ZAT14 ---------->RAV1(2)  <---------ARR14(3)     <---------ARR11(3)         --------->ZAT14 ---------At4g35610  <---------ARR11(3)     >>>>>>>>>GATA-3     --------->GLK1(2)          ------->GAMYB -------->At4g35610  --------->ARR11(3)    --------->GLK1(1)    <---------ARR14(2)      --------->MYB52(1) ------->GLK1(2) ---------->DOF2<---------YAB1------>ZmHOX2a(2) --------->ARR14(2)  --------->WOX13(1) <<<<LFY<-------TEIL--------->RVE1(1) ---------->DOF2       --------->YAB1      ----------->GT1   gcatctgacattcgtagattaaagatcttttcttgtgattcaaagagatctaagcttgggaatgagaatccagtgaagaacagagttaatcaacagagca  2468500                                                   ---------->DOF2                                               --------->WOX13(1)                                             <---------ATHB12                                       <---------HSFB2a(2)                                       --------->LBD16                             ----------->GT1 --------->ICU4                                ------>ZmHOX2a(2)                  <---------AtMYB61    --------->HSFB2a(2)          --------->At4g35610  --------->ARR14(2)                  <---------TOE1(3)--------->ARR14(2)      --------->MYB52(1)            <---------ARR14(2)       <-----------RAV1(1)  ----------->GT1--------->GLK1(1)  ------->GAMYB             <------ZmHOX2a(1) <------ZmHOX2a(1)<---------TOE2(3)<---------ARR14(2)      ----------->RAV1(1) ---------->DOF2  <----   agaggaaaactgttggagttgaggttgaaagagttaaaatccgagaaatcattcaaagagacaacagagttgctgaacgaagaaagcggaggatcgcaga  2468600                                            ------>MYB83                                            ----------->RAV1(1)                                            ------>MYB46(1)                                     -----                                         --------->ANAC58                                      <-----         ---------->DOF2                 --------->ANAC58                                    <-------    --------->At4g35610             --------->ANAC58                                  <----------DOF2    --------->ZAT2                  --------->ANAC46         --------->MYB46(3)  <------ZmHOX2a(1)    <---------At4g35610             --------->ANAC58 --------->ARR11(3)        --------->MYB59 <----- -----ZAT6             --------------->AtSPL3        <---------ARR11(3)  ---------->DOF2   --------->LBD16   gttagaagctgcaaagacttcaagagacgttccttcactcgaaacccaacaagaagacattcaacaacgagacaacaaagttaggaaactttccgagtca  2468700  Previous    Next  AGI:  At3g07730.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01170.1); similar to hypothetical protein OsJ_017835 [Oryza sativa (japonica cultivar-group)] (GB:EAZ34352.1); similar to Os05g0423200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055589.1) Range:  from: 2468191    to: 2469612    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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