Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------ANAC58                            --------->ANAC58  --------->TGA1a                   <---------TOE1(2)          --------->O2                   =====================================bZIP_DOF                   <----------DOF2            <---------TGA1a                  <---------ANAC58            <---------ANAC46          <---------YAB1         ------                  <---------ANAC58            <---------O2            --------->YAB1        ---------                  <---------ANAC46            ===================bZIP_DOF                   <--------              <-----------HVH21       <------NtERF2   ---------->DOF2 <---------ICU4        ---------         ----------->RAV1(2)--------->ANAC58  <---------ANAC58       <---------YAB1         ---------         --------->At4g35610--------->ANAC46  ===================bZIP_DOF   <----------DOF2----------   ccaagtttatcttctgcgtcgcttgtttgaacgcaaactcggcatgtctcgtgtctaaaagtatcgagtttattatgactttgaacttattttgccttaa  2456700                                                               <----------DOF2            <---------ICU4                                    <---------ANAC58      --------->LBD16                                         <---------ANAC58     <---------LBD16                                      --------->ARR14(1)    --------->TOE1(2)                                   <---------HSFB2a(1)    <-----------RAV1(2)                                ----------->ARR10    <---------LBD16                      ------>ZmHOX2a(2)--------->CCA1(2)  ------->TEIL                          <------ZmHOX2a(2)<---------ARR11(3) --->AHL20(2)                          --------->ARR14(2)<---------ARR14(2) >TOE2(3) --------->GLK1(2)            <---------ARR14(2)--------->ARR14(2)                         < -------AGL15            --------->TOE2(3)       --------------------->WRI1                      <--- >TOE1(3) <---------ARR14(2)           <---------ARR11(3)--------->ARR11(1)                      ---- ------>AGL15         <-----------GT1  --------->ARR11(3)--------->ARR11(3)     <---------ARR11(3)--- ------->AGL1<----------DOF2  <-----------GT1   --------->ATHB12       <---------TOE1(2) ------>ZmHOX2a(1)   aatgtaccagggaatctttacttaaaacctttttacagacagatcgtagttcattggaagatttgctttctcccatgttcaagaactaatcctctcgtga  2456800                                               <------MYB46(1)                                           <---------STY1(2)                                           --------->STY1(2)                                           --------->ZAT2                                          --------->ANAC46                                   --------                                          --------->ANAC58                                  <--------      <----------DOF2                 --------->HSFB2a(2)                           <-----------GT1 ---------YAB1            ------->GAMYB   --------->ANAC58                      ------>ZmHOX2a(1) ------YAB1      <----------DOF2      <---------HSFB2a(2)                      --------->TOE1(3) ----->ICU4  ---------->ID1      <---------DAG2<------MYB83            ----------->GT1 --------->TOE2(3) ------>YAB1<-----------GT1      <----------DOF2                ----------->GT1--------->TOE2(3)   tgataattcttttttttctctttattaacagacaacttttccacaagctaggttttcatttcaatagagaaaatagtgattccttaaaaccttttttccc  2456900                                          <-----------HVH21                                       <---------ANAC55(1)                                       --------->O2                                       <---------ANAC55(2)                                       ==================bZIP_DOF                                       <---------ANAC58                                       <---------ANAC58                                       --------->TGA1a                                       <---------O2                                       <---------TGA1a                                       <---------bZIP60(2)             --------->ARR14(2)   ---------->DOF2                     --------->ANAC55(2)             <---------ARR14(2)          --   ==============================================bZIP_DOF      <---------MYB52(1)                 --- -->ID1                     =====================bZIP_DOF     --------->TOE2(3)            ---------- ---GT1     --------->YAB1  <----------DOF2   ---------->DOF2 --------->TOE1(3)  <---------YAB1 <----   taaaacaaagagaataacaatgtgatcaagctttgaataagacgtgtcaaaagtactcaaaatcccttaactggattcgaactcttatagagaaggttat  2457000                                                       --------->YAB1                     --------->AHL20(2)                     <-------GAMYB                    <---------ATHB12                    <---------AHL20(2)                    --------->MYB46(2)                <---------YAB1              --------->TOE2(3)     --------->ZAT18--------->MYB111(1)           <---------At4g35610            --------->At4g35610   --------->ZAT18  --------->MYB111(2)           <---------ZAT2                 <---------ANAC55(2)   <---------ZAT18  --------->MYB52(2)            --------->At4g35610            <---------ANAC46 ------->DAG2     <---------MYB52(1)              --------->ZAT2            --------->ANAC46 ------->DOF2    ------------>MYB.PH3(2)    --------->DAG2             <---------SPL7     --------->AHL20(1) ->GT1--------->ZAT6<---------MYB46(3)     ---------->DOF2           <------NtERF2--------->TOE1(3) -----YAB1--------->ZAT14 --------->PCF2 >>>>>>>>>GATA-1             --------------->AtSPL8   -------   aaaagtggacactagactaagttagttgggcccagagtagatagataaagccagctatcattttcttagtcgtcgtacaagttacctgaaaataaaataa  2457100                 --------->DAG2                ---------->DOF2              *TSS                                                               <---------ANAC58            ------>ZmHOX2a(1)                                                    <---------ANAC46>>>>           --------------->AGL15                 <---------ETT(1)                <---------ANAC58>>>>       <----------DOF2                           <----------ID1              <---------ANAC58    >>>> -->AHL20(2)--------->LBD16              --------->YAB1                      <---------ANAC58    >>>>   aaacacaaactttcctgaaaaagtcgtctccagttttaagcattgataaatccgacaagaagtccgattttgttccatagcttgcttgtgtttttagtgg  2457200                                                                              <------MYB46(1)                                                                              <------MYB83                                                <---------ANAC46             <---------AtMYB61                                                <------MYB83                <---------WOX13(1)                                                <------MYB46(1)            --------->ARR14(2)                                               <---------AtMYB61           <---------ARR14(2)                                               --------->MYB55(2)      <---------ZAT2         ---------->DOF2   <----------DOF2     <---------MYB46(3)   <---------ANAC46 >>>>>GATA-2           --------->DAG2      --------->ATHB12         <---------ANAC58                < >>>>>GATA-3       --------->YAB1         <------ZmHOX2a(2)         <---------ANAC58              --- >>>>>GATA-4      <---------ATHB12    <---------WOX13(1)         <---------ARR14(2)        <---------ANAC58 >>>>>GATA-1    --------->GLK1(1)  <---------YAB1                --------->ARR14(2)        <---------ANAC58   attgagtcactgaaagagaaatcataaggctttgttgatgatggatcatttggtggagacgaattcagttccgagcagattggtggaagaaaggcttgat  2457300                                                         <---------At4g35610                                                  <---------ANAC46                                                  <---------REM1(1)                                                <------MYB83                                                <------MYB46(1)                                               <---------AtMYB61                                              <---------MYB52(1)                                             <-------GAMYB                                            <---------MYB46(3)                                            --------->ATHB12        --------->HSFB2a(2)                                            ------>ZmHOX2a(2)       <---------HSFB2a(2)                                          --------->ARR11(3)    <---------ANAC58                                          <---------ARR14(2)    <---------ANAC58                                          --------->ARR14(2)    <---------ANAC46                                          <---------ARR11(3)   <---------MYB46(3)        <---------ZAT6                 <---------TOE1(3) --------->At4g35610   <---------ANAC46             <-----------------AGL1   <---------ZAT2  <-------TEIL          --------->At4g35610 ==================HOX2a_HOX2a --------->GLK1(2)   <---------At4g35610 <------ZmHOX2a(1) --------->ALFIN1             <-----------RAV1(1) ---------GLK1(2)  --------->DAG2      <---------TOE2(3) --------->ZAT2         --------->ATHB12 -------->ARR10   ---------->DOF2   <---------MYB52(1) <------ZmHOX2a(1)       <---------YAB1   <----   gagattcgtagagtaatgggtaaagctgatgacgacccgttaaggatcgttggtgtaggagctggtgcttggggaagcgttttcattgcaatgttgcagg  2457400                                                                          --------->ZAT2                                                                          <---------ZAT2                                                                          <---------At4g35610                                                                          --------->At4g35610                                                                        <---------ALFIN1                                                                        <-----------RAV1(2)       <--------P                                                     ----------->RAV1(1)      --------->At5g28300          <---------ARR14(2)              --------->ANAC58              ----    <---------TOE2(3)              --------->GLK1(2)        <---------ATHB12                     <---   <---------At5g28300            <---------GLK1(2)<------NtERF2  --------->DAG2                <----  --------->MYB52(1)        <---------ZAT6      <------ZmHOX2a(1)---------->DOF2             -------- --ZmHOX2a(1)       ---------->DOF2--------->ARR14(2) <------NtERF2--------->ANAC58 <---------MYB46(3)   aaaattacggtaagtttaggggcaaagttagtgtgagaatctggagaagaggaggcagagcaatcgataaagccacagctgaacatttgttcgaagtgat  2457500                          <-------TEIL                         <--------P                        <-------GAMYB--------->ALFIN1 ----->AHL20(2)        ----------->GT1                                                     <---------At4g35610 ------AHL20(2)        <---------MYB46(3)  <---------CCA1(2)                  ----------->GT1    ---- -----WOX13(1)        <---------AtMYB61  <---------ANAC58                 --------->ARR14(2)     <--- ->ICU4              <------ZmHOX2a(1)   <---------ANAC58                 <---------ARR14(2)   ------   taattcgagggaagaattgttgaggaggttgataagaaggtgtgcttatctcaagtatgtggaagctagattaggggatagggttttatatgctgatgag  2457600  Previous    Next  AGI:  At3g07680.1    Description:  emp24/gp25L/p24 family protein. similar to emp24/gp25L/p24 protein-related [Arabidopsis thaliana] (TAIR:AT3G22845.1); similar to unknown [Populus trichocarpa] (GB:ABK92934.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD (InterPro:IPR009038) Range:  from: 2455296    to: 2456885    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g07690.1    Description:  glycerol-3-phosphate dehydrogenase (NAD+). similar to GPDHC1, glycerol-3-phosphate dehydrogenase (NAD+) [Arabidopsis thaliana] (TAIR:AT2G41540.3); similar to GPDHC1, glycerol-3-phosphate dehydrogenase (NAD+) [Arabidopsis thaliana] (TAIR:AT2G41540.2); similar to GPDHC1, NAD binding / glycerol-3-phosphate dehydrogenase (NAD+) [Arabidopsis thaliana] (TAIR:AT2G41540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40732.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23633.1); similar to putative glycerol-3-phosphate dehydrogenase [Oryza sativa (japonica cultivar-group)] (GB:BAB90253.1); contains InterPro domain NAD-d Range:  from: 2457114    to: 2459558    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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