Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------bZIP60(1)                                                     --------->bZIP60(1)                                          =============================HOX2a_HOX2a                                          ------>ZmHOX2a(2)                                         --------->ARR14(1)                                         --------->CCA1(2)                                         ==============================HOX2a_HOX2a                                         <------ZmHOX2a(2)                                        --------->ARR14(2)                                        <---------ARR11(3)          ----------->GT1               --------->ARR11(3)          --------->At4g35610           <---------ARR14(2)          <---------At4g35610           --------->AGP1          <---------ANAC46             --------->GLK1(1)                                    <--------         <-----------------------TaNAC69(2)   <----------DOF2   ------>ZmHOX2a(1)       <---------TGA1a         <XXXXXXXXXXXXXXXXXXXXMIR1886.3<---------GLK1(1)--------->YAB1             ----------->RAV1(2) ------>AHL20(2)                      ----------->ARR10<---------YAB1    <------ZmHOX2a(1)--------->ALFIN1 >GT1<---------ANAC55(2)        ----------->HVH21 <---------YAB1--------->LBD16<---------CCA1(2)   ttatatcaagtgaggtgaaatatttgaatagtttgtgacagagatccgcttgatgatatcataatcctggtataaggagctatatccctgaggtgaggtc  2437700                   --------->ANAC58                   --------->ANAC58                                    <----------DOF2                   --------->ANAC46                                  <---------YAB1             <---------DAG2                  <---------YAB1       <------ZmHOX2a(2)          <---------ALFIN1                --------->GLK1(2)      --------->ARR11(3)       <-----------GT1              <-----------GT1              <---------ARR11(3)   <------ZmHOX2a(1) <---------ARR11(3)  <---------GLK1(2)   ---------->DOF2 -AtMYB61--------->MYB46(3) <---------At4g35610         ----------------->AGL1   tgagaggagtcaccaccttacaagacattccgctcttgttacaaattctgtttagttttccaaaaaagatcatctttgtttttagtaagaatgtagtcac  2437800                                                                                                    -                                                                                                    -             --------->YAB1                                                            <---------HSFC1(2)          --------->WOX13(1)                                                           --------->HSFC1(2)        <---------YAB1                   <---------ANAC58                         <---------HSFB2a(2)      --------->GLK1(1)                  <---------ANAC58                    <----------DOF2      <--     --------->ARR11(3)                  <---------ANAC46              ------>ZmHOX2a(1)    <--------     <---------ARR11(3)          <---------ZAT6                 <---------ANAC55(2)    <---------HSFB2a(1)    <---------At4g35610    --------->ARR11(3)                   --------->ANAC55(2)    --------->HSFB2a(1)    --------->At4g35610---------->DOF2 <-----------GT1       <---------GLK1(2)    --------->HSFB2a(2)   taagtcagatatcaatgacaaataccaaagaactagtgttttttcgtgtttcatccatacatagatacttatcctgtgtcttttttagaaatttcttttt  2437900   <---------bZIP60(2)   <---------ANAC58                    --------->ARR11(3)                   ------>ZmHOX2a(1)   <---------ANAC58        <---------ZAT6 <----------DOF2        --------->GLK1(2) ---------->TGA1       <---------YAB1  <---------ARR11(3)      <---------AHL20(2) ---------->HVH21  <---------WOX13(1) <---------CCA1(2)      --------->CCA1(2)                    --- -------AtLEC2   --------->ATHB12<---------ZAT6             --------->ARR11(3)                   ---- --DOF2         <---------YAB1 --------->MYB52(2)           <---------ARR11(3)               --------   gtatgacgtttcaaaattttgattgactattgttagtggtatatctttgagttaataaacgagatataatctgttttcctgttcacaaaaaaaaaaaaaa  2438000                                                  ----------->GT1                             <------      --------->YAB1                              <----------ID1                         <---------GLK1(2) --------->AHL20(2)                           <------------CBF                        --------->YAB1 ------>AHL20(2)                             --------->ATHB12                      <---------GLK1(1)< ----->AHL20(2)                     <---------GLK1(2)                           --------->ANAC58   -- ->AHL20(2)              <----------DOF2   <<<<<<<<<<<<<<<<<LFY                 --------->ANAC58   --   taaaaaaatcatatatcatccaattttcttttggttcagattttaaaacattgggaaaaatagggactagatgacaaataacaagaaatcagaattttgg  2438100                                      *TSS           <---------ICU4     <----------ID1           --------->ATHB51   --------->ANAC46       --------->ARR14(1)             --------->LBD16           --------->YAB1     --------->ANAC58      --------->ARR14(2)             <---------ANAC46      ------------>CBF        --------->ANAC58      <---------GLK1(2)             --------->At4g35610 ---HSFB2a(2)           ------------>CBF            --------->ARR11(1)            <---------LBD16 ------ZmHOX2a(1)       <---------ZAT18             <---------ARR14(2)           --------->MYB52(1) ------->ICU4           --------->ZAT18   <------ZmHOX2a(1)                 ---------->DOF2 --------->GT1   <----------DOF2----------------->AGL2<-------TEIL        <---------YAB1   aaggattaaacaataatcgcttcttgtgcaataagccaaaaacaggattaaacagattcgctcagttctcaaaacgatgaaagtagcggagaagattgtt  2438200                     <---------GLK1(1)         --------->ATHB12         <---------ICU4        --------->ICU4         <---------ATHB12 <-----------GT1   --------->HSFB2a(2)         --------->MYB46(3)   <---------HSFB2a(2)  --------->At4g35610 --------->TOE2(3)                     --------->ZAT14----  <---------LBD16   --------->ARR14(2)      <----------DOF2                    ----------->GT1   <--- ------>ZmHOX2a(1)  <---------ARR14(2)<---------YAB1               <---------ALFIN1           -------   ttcctctggaatgattccgatggatttgctgcaaccatttctgatactttaaaccctagccctagttcccctcttcgcaaactgtaaactcgactcgtcc  2438300                                                                           <---------MYB52(1)                                                                          <-------GAMYB                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                    <---------ZAT2             <----------DOF2                                        --------->At4g35610          ------>NtERF2                                        --------->ARR11(3)          --------->LBD16                <---------YAB1        --------->ARR14(2)      --------->ARR14(2)        <---------MYB46(2)             <---------ARR14(2)         <-------GAMYB     <---------GLK1(1)        ------>NtERF2      <---------ZAT14    <---------At4g35610  <---------ANAC58 --------->HSFB2a(2)          --------->LBD16    --------->ZAT14<------ZmHOX2a(2)        <---------ANAC58 -->ZmHOX2a(1)      <-----------GT1    ----------->GT1         --------->AGP1<---------MYB46(3)   --- -------DOF2<---------DAG2   --------->DEAR3(1) =======================HOX2a_HOX2a       <---------ANAC46 --->ID1<---------LBD16     <---------LBD16     ------>ZmHOX2a(1)   --------->ZAT2  <---------ICU4<--   tttctcgatttccgccttttacttactatctccgcctaacattgtaattcctgcagagaagaacagatccagcttccgttggataagtatggcgttgaag  2438400            <------NtERF2           --------->LBD16                                        ---------->DOF2           ------>NtERF2                                         --------->AHL20(2)          <---------ANAC46                                     <----------DOF2         <---------LBD16    <---------ANAC46                 ------>ZmHOX2a(1)                      -      --------->DEAR3(2)    <---------ANAC58              ------>ZmHOX2a(1)                         < ------>ALFIN1              <---------ANAC58          --------->ARR14(2)                    <-------- -------ANAC46   <---------ARR14(2)                   <---------ARR14(2)<---------ANAC46  --------->YAB1   gtgtggaaaccggcgggagtatcgttcatttcgtagatgaaaatgaagtttatcaggttcctcctctttaaatcgcgtttatattctattaatcttcata  2438500                ---------->ID1         <---------MYB46(3) -------->AHL20(2)  <---------DAG2<---------MYB52(1)      <---------AHL20(2)               <---------ZAT18 ---------AHL20(2)  <----------DOF2  <---------ANAC46     --------->AHL20(2)  --------->At4g35610 --- -YAB1    --------->MYB52(2)    <---------MYB46(3)       --------->AHL20(2)   <---------At4g35610----   gtttaattgagttcgtttctcgctttatttatagtcgttgtttgttcttagaactgaaattttattcagtgatatagttaagctgaagaatagtggtctc  2438600  Previous    Next  AGI:  At3g07630.1    Description:  ADT2 (AROGENATE DEHYDRATASE 2); arogenate dehydratase/ prephenate dehydratase. similar to ADT1 (AROGENATE DEHYDRATASE 1), arogenate dehydratase/ prephenate dehydratase [Arabidopsis thaliana] (TAIR:AT1G11790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21784.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912); contains InterPro domain Prephenate dehydratase; (InterPro:IPR001086) Range:  from: 2435451    to: 2437971    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g07640.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO41126.1) Range:  from: 2438138    to: 2439889    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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