Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->At4g35610                                                                  <-------   ----------->HVH21                    <---------YAB1    <---------ANAC58                  <-------- --------->TGA1a                    <-----------GT1       <---------ANAC58            --------->YAB1- <---------O2                 ------->TEIL      <----------DOF2                      <---------ATHB12 --------->O2               --------->YAB1      <---------DAG2       --------->HSFB2a(2) --------->ATHB12 <---------TGA1a           <---------ATHB12  --------->ANAC58        <---------HSFB2a(2)<---------YAB1 ---ANAC58               --------->WOX13(1)  --------->ANAC58     <-----------GT1--------->MYB46(3) < ---ANAC58             <---------YAB1 --------->YAB1    <-----------GT1  <-----------RAV1(1)---------   cacacttgacagcccaatatgtcttatcaatgaacatttttcatcatacgcttttttttttcttgttttttctcgatgttgctaccactgatgatttatt  2409100                 ===============HOX2a_HOX2a                 <---------ZAT2                 <-----------RAV1(1)                        --------->ZAT2       --------->YAB1                                       <---------At4g35610      --------->At4g35610----------------->AGL3             --------->At4g35610   --------->At4g35610   ------>ZmHOX2a(2)               <------ZmHOX2a(2)  ----------->RAV1(1)   <------ZmHOX2a(2)               <-----------HVH21 --AHL20(2)      ------>ZmHOX2a(1)     <---------YAB1   <---------ARR14(2) -AHL20(2)       ==============HOX2a_HOX2a              --------->ARR14(2) -------->At4g35610    --------->ARR14(2)            <------NtERF2   --------->At4g35610 ---------At4g35610    <---------ARR14(2)           <---------At4g35610      <-----------GT1 >AHL20(2)<---------GLK1(2)   --------->DAG2  <---------ANAC46     <---------WOX13(1)   tcagcagcatcagaatttcctgttggatccaaaaattggttatcaattgtttggagccgatcagctcggattgctgcatttaccttcttgtacatctctt  2409200                                                                                           ----------                                                                                           <---------                                                                                           <---------YAB1                                                                           --------->At4g35610                          <---------TOE2(3)                                <---------At4g35610                          <---------TOE1(3)                          <---------AHL20(2)--------->KAN4(2)                  --------->HSFC1(2)                            <------ZmHOX2a(2)    <------ZmHOX2a(2)                  <---------HSFC1(2) --------->AHL20(2)        <---------ARR11(3)   <---------ARR11(3)                <---------ARR11(3) <---------ANAC55(2)         --------->ARR11(3)   --------->ARR11(3)   ccatgttgtctagctcaagacccttcttaaggtagtcacttaaatgagttgtcttcagaaattgagatcatttattcatctcaagagatcattctcattc  2409300                                                                                         --------->At5g28300                                                                                        ----------->GT1                                                                                      --------->SPL7                                                                   <---------ALFIN1   <---------ZAT14                                                                --------->ANAC46      --------->ZAT14                                                                <---------ALFIN1    <---------SPL7                                                                --------->ANAC58  --------->ANAC55(2)                                                                --------->ANAC58  --------------->AtSPL3                                                           --------->ANAC58       <---------ANAC55(2)                      <------ZmHOX2a(1)                    --------->ANAC46      <---------At5g28300                     <---------YAB1                        --------->ANAC58     <-----------GT1         <----------DOF2<---------WOX13(1)          --------->ANAC58            --------->MYB52(1) ----->AGL15        <---------TOE2(3)               --------->ANAC58        <---------TOE2(3) ------AGL15  <---------YAB1                        --------->ANAC46       ---------->DOF2-----------   aagaaaatgtgcttatatgatttaggattgacattaccctcatgtataatccacaatccacaatccacaccacttgctaaagttacggtacggtgacaca  2409400                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                           --------->YAB1                                                        --------->YAB1                                                      --------->AHL20(1)                                                      --------->AHL20(2)                                                  --------->YAB1                         <---------AHL20(2)      --------->AHL20(2)                                --                         --------->ATHB51    <---------AHL20(2)                      --------->AHL20(2)                    --------->AHL20(2)       --------->AHL20(2)                    *TSS   --------->YAB1                  <------------CBF           --------->AHL20(1)               ----------->GT1    ----                 --------->DAG2       ----------->GT1--------->YAB1         ---------->DOF2      ---- >HVH21    --------->TOE2(3)      <------ZmHOX2a(1)--------->AHL20(2)    <----------ID1  <---------YAB1   acttcggcataaatctcaaaaattgaataatttgaaggattagaaaataaaataaaaataataatataaacaaatgcgaaaagaaaaaaaaatcatagca  2409500                 <---------ZAT18                                                      --------->ATHB12                 --------->ZAT14                                                  --------->ATHB12           <-----------HVH21                                                   <---------ANAC58           <----------DOF2                                                     <---------ANAC58         --------->At4g35610                       --------->YAB1              --------->ANAC55(2)         <---------At4g35610                       <---------ICU4            <-----------GT1 ------->YAB1  --------->At4g35610                <---------ATHB12       <----------DOF2 ----->ANAC58  <---------At4g35610              --------->WOX13(1)      <------------------------ANAC81 ----->ANAC58---------->CDC5              <---------GLK1(2)        --------->KAN4(2)<---------WOX13(1)   agcaaaatttctgcttcagcgctctcgttctgttttggtatttggattttcaatcatggattgagcgattgttctctttttacttgattgatttcttcga  2409600               <---------ANAC46               <---------ANAC58               <-----------RAV1(1)               <---------ANAC58             <---------ANAC46          <----------DOF2         ------>ZmHOX2a(2)       <---------AGP1                                                                   -------------       <---------ARR11(3)                                                               <------------       --------->ARR11(3)         <----------DOF2                                       <---------DAG2       --------->ARR14(2)   --------->ATHB51   --------->WOX13(1)                       <----------DOF2       <---------ARR14(2)   <---------ICU4   <------ZmHOX2a(2)     --------->GLK1(2)   <---------ANAC58      <---------CCA1(2)  --------->YAB1      <---------ATHB12     <---------GLK1(2)    <---------ANAC58   <---------LBD16      <---------YAB1 <-----------GT1        --------->LBD16 ---------->DOF2   taaactctggatcttttgtgtgggttttcataatttctttttttccgatcaatctaatccaatccagagattctgagtctcaaagttttgcttttttgag  2409700                                                                                   ----------->HVH21                                                                           --------->ARR14(2)                                                                         --------->LBD16                                                                        <---------HSFB2a(2)                                                                        <---------ANAC55(2)                                                                        --------->ANAC55(2)                                                                        --------->ANAC46                                                                        --------->HSFB2a(2)                                                                       <---------LBD16                                           ------->TEIL                ------>ZmHOX2a(2)                                 <---------ANAC58          ----------------------->TaNAC69(2)                                 <---------ANAC58          <----------DOF2 <---------ARR14(2)                                --------->ZAT2      <---------LBD16  <---------ARR14(2)       ---------->DOF2     ----------------------->TaNAC69(2)        --------->ARR14(2)      <------- -->AGL15                <---------GLK1(2) <---------ARR14(2) <---------ANAC58 --------->ZAT14 ---AGL15                --------->ARR14(2)--------->ARR14(2) <---------ANAC58 <---------ZAT14    <--   tctgttttccaaagacatgtagggctggattctaagcttgcaacgtatccatttccctggtctttcttggtgatccggaactgaagtgaaggctctctgg  2409800                                        <-------TEIL               <---------YAB1       <---------TOE2(2)  --------------->AGL15             --------->MYB59                                 <------ZmHOX2a(1)  <---------------AGL15             <---------TOE1(2)                             <---------ANAC46 <---------ANAC58           --------->At4g35610                                --------->ALFIN1 <---------ANAC58           <---------At4g35610                          --------->CCA1(2) --LBD16    <------ZmHOX2a(2)       <---------TOE2(3)                   --------->ARR11(3) -------WOX13(1)     <---------TOE2(3) --------->ARR11(3)               <---------ARR11(3)   attgcttcatttagatcaatatagaggtttatctgacttaggttcttgatgagtttatgttctgtatcagagtagatatatgtggaggagatagttttag  2409900                                                                             --------->ICU4                                                                            <---------TOE2(3)                                                                           <---------ICU4               <---------At4g35610                                         --------->YAB1              <-----------GT1                                             --------->ICU4          --------->ARR11(3)                     --------->ANAC58       --------->YAB1          <---------GLK1(2)                      --------->ANAC58      <---------YAB1        ----------->ARR10        <------ZmHOX2a(1)                   --------->YAB1                --   --------->ICU4       --------->AHL20(2)--------->ALFIN1          <---------YAB1              <----   ttttaaagattagattttgctgtccattttatacaggaattgaagtgaggcatggaagatgtgtccgagtctgataataatgttgagacctccattatcc  2410000  Previous    Next  AGI:  At3g07550.1    Description:  F-box family protein (FBL12). Identical to F-box/LRR-repeat protein 12 (FBL12) [Arabidopsis Thaliana] (GB:Q9SRR1); similar to protein binding [Arabidopsis thaliana] (TAIR:AT5G23340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16618.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 2409483    to: 2411300    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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