Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->REM1(1)                                                                                          <-------TEIL                                                                                         <-----------                                                                                  --------->YAB1                                         <---------MYB59                         --------->ICU4                                       ------->TEIL                              <---------ATHB12                                    <---------ANAC55(2)                        --------->WOX13(1)                                    --------->ANAC55(2)                      <---------ATHB12                                   --------->MYB59                          --------->ANAC46                                   <---------------AtSPL8                   --------->ANAC58                                   --------------->AtSPL8                   --------->AtLEC2       ----------->GT1      ---------->DOF2                                 --------->ANAC58 ---------HVH21 --------->YAB1--------->DAG2                        <----------DOF2    --------->At4g35610   cttcagagatagttaaaatgagaatttctcaaaaggttatgtaccaaaatcgtgtgatcaactgtttcttctttttccaagcaatcagtagctacattta  2400000                                                                                         --------->TOE2(3)                           --------->ANAC46                                            ------->TEIL                           --------->ANAC58                                            -------->P <--                           --------->ANAC58                                        <-----------ARR10                       ------>ZmHOX2a(1)                                           ------->TEIL -----          --------->HSFB2a(2)    --------->YAB1                                    --------->ARR14(2)         <---------LBD16<---------REM1(2)            ---------->DOF2           --------->At5g28300---        ------>ZmHOX2a(1)<---------ALFIN1         --------->ANAC58          --------->At4g35610 <----  <-------TEIL      ------>ZmHOX2a(1)         ------------------------>ANAC81 ----------->GT1   ----- ----AGL15<---------HSFB2a(2)    --------->TOE2(3)--------->ANAC58  <---------ZAT6 <---------ARR14(2)   gagattcatcctctggaatttcctcctacacacaaacttaattgtgagaaacaagaaaagaagaacatcactgttaagagctgtgaatctacctcaagtg  2400100                                         ------>ZmHOX2a(1)                                      ------>ZmHOX2a(1)                                   ------>MYB83                                   ------>MYB46(1)                            <---------MYB52(2)                           <---------ANAC55(2)                           --------->ANAC58                           --------->ANAC46             ================================HOX2a_HOX2a             ===================================HOX2a_HOX2a                           ---------->DOF2         <---------YAB1    --------->ANAC55(2)                                     --------->TOE2(3)       --------->YAB1      --------->ANAC58                                      --------->ARR14(2)       <---------ICU4      --------->ANAC55(1)                                   --------->ARR11(3)      --------->ICU4   ----------->RAV1(1)      <---------AHL20(2)               <---------ARR11(3) -------At4g35610      ============================RAV                <---------AHL20(2) ---->ZAT14  ------>ZmHOX2a(2)  --------->HSFB2a(1)            --------->ANAC58  <---------ARR14(2) ------>At4g35610     ----------->HVH21----------->RAV1(2)     --------->ANAC58 <---------ARR14(1) -----ZAT14--------->ARR11(3)   <---------HSFB2a(1) <----------ID1    --------->AHL20(2) ---->ZAT18<---------ARR11(3) <-----------GT1   --------->AHL20(2)   --------->AHL20(2)     ---------   aactgagaattatgatcttctccagcgacaagtaaccttcctcctgctaataaaacaacaagaccaaggaatttaaaaaacagtatcttaaagaaggttg  2400200                                                                                              <------                                                                                              -------                                                                                              -------                                                               --------->TOE1(2)              -------                                                              --------->ANAC58               <-------                                                              --------->ANAC58             --------->ANAC55(2)                                                            --------->ARR14(2)        <------MYB46(1)                                                            <---------ARR14(2)        <------MYB83                            <----------DOF2                <------ZmHOX2a(1)          <---------MYB46(3)                      ------->TEIL               <---------WOX13(1)               --------->ATHB12  < -->GT1               -------->P          <---------ZAT6--------->At4g35610<---------ANAC46<---------ANAC55(2)   aattatggagaattggtgttcatcaaccttctttgaaacaagtagagttcgattgatcagaggaacccaagaccatggagggaacgattggttatgtatc  2400300                                     --------->TOE2(2)                  --------->At4g35610                                     --------->TOE1(3)                  --------->ZAT2                                     --------->TOE1(2)        ------>NtERF2     --------->MYB52(1) --------->At4g35610                  --------->WRKY12 ---ARR14(2)           --------->ANAC58                      ----------->HVH21 -->ARR11(3)       --------->HSFB2a(2)       --------->At5g28300        <---------At4g35610 >TEIL--------->RAP2.6(3)           <---------HSFB2a(1)    --------->At4g35610           ----------->GT1 -->ARR14(2)       <---------HSFB2a(2)     <---------DEAR3(1)--------->WRKY38(1)        <------ZmHOX2a(1) --CCA1(2)  ---------->DOF2         --------->HSFB2a(1)--------->AtMYB61<---------ZAT2  ============= -----------------AGL1 --------->ANAC58 ----------->HVH21  <---------At4g35610  --------->ATHB12   ttccacttatcggcaaaagctcgagaagctacagagaaaccttcgacggtgagtctaccatcgctgacctctcgagctgaatccattggaggagtaaaca  2400400                                                                -------->P                                                                ------>MYB46(1)                                                                --------->MYB52(1)                                                                ------>MYB83                                                              <---------MYB111(1)                                                              --------->MYB46(3)                                                              ------->GAMYB                                                             --------->DEAR3(2)                                                             <---------MYB52(2)                                                             <---------MYB55(2)                                                             --------->MYB46(3)                                                            -------->P                                                        --------->ANAC58                    <----------DOF2                     --------->ANAC46                            -               ---------->ID1                         ---------->DOF2                               -        ------>ZmHOX2a(2)                  ----------->RAV1(1)--------->AtMYB61           <----------       --------->GLK1(1)                 --------->At4g35610--------->ANAC58             --------->AHL20(2)      --------->ARR11(3)                 <---------At4g35610--------->ANAC58         --------->AHL20(2)      <---------ARR11(3) <---------LBD16--------->ANAC46--------->ANAC58             <---------AHL20(2) ==============HOX2a_HOX2a --------->LBD16 *TSS --------->TOE1(1)                    --------->ICU4 -   aaatcgctgatctcttcgtcgtctttctccggtctattatctcagcaacatcgtatcaaagcaaccaacccgaatttagtttttgaaaaaattaactaat  2400500         ------>MYB46(1)                                                                 <------NtERF2         --------->ARR14(2)                                                             ------>NtERF2         <---------ARR14(2)                                                            --------->RAP2.3(2)         --------->MYB52(1)                                                            --------->RAP2.3(3)         ------>MYB83                                        ------>NtERF2             --------->RAP2.6(2)    ------>MYB46(1)                                         --------->DEAR3(1)        --------->DEAR4(2)    ------>MYB83                                            --------->RAP2.3(2)       --------->RAP2.3(1)    --------->MYB52(1)                                     --------->RAP2.3(1)        --------->ORA47(2)  ------->GAMYB                                           ------>NtERF2               --------->ATERF1(1)  <---------MYB59                                         --------->LBD16             --------->ERF1  --------->AtMYB61                                      --------->ANAC46            <---------ATERF1(1) --------->MYB46(3)             ------->TEIL          <---------ARR14(2)            --------->DEAR3(1) ----->MYB46(1)                 --------->GLK1(2)     --------->ARR14(2)      ------->GAMYB --------- ------->P   ----------->GT1    <---------ARR11(1)  <---------AHL20(2)        --------->TOE2(3) -GT1  <---------MYB59          <-----------ARR10  --------->AHL20(2)        --------->MYB46(3) ----->MYB83 --------->LBD16   <---------ARR14(1)  <---------AHL20(2) ------>ZmHOX2a(1)--------->DEAR3(1)   ccaaccaaaccgaaccggagaaattcgattttcgaatctaaaccagtttcgaattaaatccgccgcttcgtcctcgacaacctccatcgccgccttgcat  2400600                      <---------At4g35610                     ------->TEIL                                ----------->GT1                   ------>NtERF2                           <---------YAB1                  --------->ANAC58                   --------->LBD16                        <---------AHL20(2)               <---------ANAC55(2)             <---------ANAC58                           --------->ICU4                 --------->YAB1             <---------ANAC58                      ----------->GT1                    <---------YAB1     --------->LBD16 --------->ARR14(2)           --------->ANAC58          ------->TEIL   --------->ANAC58 --------->TOE2(2)--------->RAP2.6(2)             --------->ANAC58      --------->ANAC46 --------->CCA1(2) >AtLEC2 <----------DOF2  <---------MYB52(1)    --------->MYB52(1)      --------------->AtSPL8   aaacctccgtactttccttgccgcatctgttagtctctctctaaaaaacaagacggaaatttttatggagttatactgaacctcttctatgatacgcata  2400700                         <---------ANAC46                      <---------MYB52(1)                     <-------GAMYB                    <---------ANAC58                                                      ---------->ID1                    <---------ANAC58                                                  <---------ANAC58                    <---------ANAC46                                                  <---------ANAC58              <---------TOE2(3)             <---------AHL20(2)                     <---------MYB52(1)              <---------TOE1(3) --------->DAG2                                   <-----------RAV1(1)              --------->MYB59  ---------->DOF2<-----------GT1             <---------GLK1(2)   <------   tttctggctgtttttttaggttgcgttgtttggaaaagctctgaatttaaacctcgcttattcagttttttaaacagattatactgttgtttgtctccat  2400800                                                                          --------->ICU4                                                                       <--------P                                                                     <------MYB83                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                     <------MYB46(1)                                                                     ----------->GT1                                                                     <---------ANAC46                                                  --------->ATHB12  <------MYB83                                         <---------ANAC58           <---------MYB46(3)                                     <---------DAG2                 --------->MYB59                                     <----------DOF2                <------MYB46(1)       ----------->ARR10 ---------->DOF2 <---------ANAC46         <--------P          <---------ANAC46 ---AtLEC2            <---------TOE2(3)  <---------ANAC58    <---------LBD16 <---------YAB1         <   ggaattggtgagtttctcttggttaatgaaagtctaatacttttcgtgtgagttattgaaaacctcgggttgggtaagtatgaaagttttgtgttttttt  2400900  Previous    Next  AGI:  At3g07525.1    Description:  ATG10 (AUTOPHAGY 10); transporter. similar to unnamed protein product [Vitis vinifera] (GB:CAO23323.1); contains InterPro domain Autophagocytosis associated protein, C-terminal (InterPro:IPR007135) Range:  from: 2399129    to: 2400443    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g07530.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO67613.1); contains domain CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (PTHR11203); contains domain UNCHARACTERIZED (PTHR11203:SF2) Range:  from: 2400799    to: 2404286    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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