Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ARR11(3)                                            <----------DOF2                                 <-----------GT1          <---------ARR11(3)                               <---------AHL20(2)         --------->AHL20(1)                     <---                               --------->AHL20(2)--------->ZAT6                               -------       <-----------GT1   --------->YAB1     --------->TOE1(3)                                 <------ --------->AHL20(2)    ----------->GT1      --------->TOE2(3)<-----------GT1           ---------->DOF2 -ALFIN1   <---------ALFIN1<---------YAB1<-----------GT1  <---------AHL20(1)    --------->HSFB2a(2)   ctataaatttcacacacttcaaaactagtataatttatcaattttactttaacactggaatattttcatcttatacagacttcgataacaaaagaatata  2364900                                                                                   --------->WRKY38(1)                                                                                   --------->WRKY12                                                                                   ----------->HVH21                                                                            -------->P                                                                           <-----------GT1                                                                    --------->AHL20(1)          --------->ANAC46                         <---------AtLEC2 <---------AHL20(1)          --------->ANAC58                       --------->AtLEC2   --------->AHL20(2)           <---          --------->ANAC58                 --------->DAG2           <---------AHL20(2)  <---------At4g35610 --------GT1                          --------->YAB1               --------->AHL20(2)   --------->At4g35610 -->ARR11(3)      <----------DOF2    ----------->GT1------->TEIL   <---------AHL20(2) <---------WOX13(1) ---ARR11(3)---------->DOF2  ------->TEIL ---------->DOF2      --------->AHL20(2)<----------DOF2 <---   tactaattttaaacgaaagacttttccaacgaagctacaatgaaaaaagtcatgcatgtaaacaaaaaaataaatttcaacccctttgactgatgacaat  2365000                                                                 <---------AHL20(2)                                                                --------->AHL20(1)                                                                <---------AHL20(1)                                                               <---------AHL20(2)  <---------AHL20(1)                                                             --------->AHL20(2)    --------->AHL20(1)                                                           <---------AHL20(2)      <---------AHL20(2)                                                           --------->AHL20(2)      --------->AHL20(2)                                                         <---------AHL20(2)        <---------ARR11(3)                                                         --------->AHL20(2)        --------->ARR11(3)                                                       <---------AHL20(2)     --------->AHL20(2)      --------->ANAC58                                 --------->AHL20(2)   ----------->GT1      --------->ANAC58                               <---------AHL20(2)    <-------MYC3          ----      --------->ANAC46                               --------->AHL20(2)    ------->MYC3        ------  --------->ANAC46               <---------ARR14(2)<---------AHL20(2) <-----------GT1        -------- ------ARR11(3)                  --------->ARR14(2)--------->AHL20(2)<-----------GT1        <-------- ------AHL20(1)<--------P   <---------YAB1 <---------CCA1(2) <---------AHL20(2)   --------->AHL20(2)   atatacacaagaaacaggttgacatatatgatgagtatatgacttctatctatatatatatatatatatatttaacacatgtaaatatatttctataatt  2365100                 --------->AHL20(1)                 <---------ARR11(3)                 --------->ARR11(3)                 <---------AHL20(1)               <---------AHL20(1)               --------->ARR11(3)   <---------AHL20(1)                           --------->AHL20(2)   <---------AHL20(2)                          --------->AHL20(2)                                 ---   --------->AHL20(1)                      <---------AHL20(2)           ------>MYB83              ---   --------->AHL20(2)                      <---------AHL20(1)           ------>MYB46(1)          ---- ----->TOE2(3) --------->AHL20(1)          --------->AHL20(2)    <---------ANAC58         <---------YAB1 --->ICU4      <---------ARR11(3)          --------->AHL20(1)    <---------ANAC58 ----------->GT1---- ->YAB1     --------->AHL20(2)          --------->YAB1  --------->TOE1(2)       ----------->GT1------ -YAB1 ----------->GT1                <---------YAB1    --------->TOE2(2)       <---------ANAC46 ----   cttaataaattgaaaaaaatattttcttctaaataaaactattaataaaataaaaaaacatacgatttcttacctagcgatgcagtgaaaatatgagaga  2365200          <---------WRKY12          <---------WRKY38(1)  <---------ZAT2                                                       --------->YAB1           -----  --------->At4g35610        <---------ALFIN1                          <---------ICU4        <-------  <-------GAMYB            --------->ANAC58                           <---------YAB1       --------->YAB1  <---------At4g35610      --------->ANAC58                          --------->AHL20(2)    <---------ICU4 --------->AtMYB77         --------->ANAC46    --------->ANAC46      <---------AHL20(2)<---------AHL20(2) --->NtERF2 --------->At4g35610        ------->MYC3                 --------->YAB1     --------->AHL20(2) ----->ANAC58      ---------->DOF2     <-------MYC2                <---------YAB1------>NtERF2<------ ----->ANAC58    <---------HSFB2a(2)   <-------MYC3            --------->ANAC55(2)  <----------DOF2 - --->CCA1(2)<---------At4g35610        ------->MYC2         ------>ZmHOX2a(1)--------->DEAR3(1) <---- ----->ANAC46    --------->HSFB2a(2)<---------ALFIN1     ------>ZmHOX2a(1)<-----------GT1 <---------YAB1   cgccagttgcagtcaacttccaaaagaacacgcactctccacatgctctacccaaattcctccttacctattataatcacctccgacttttaattataac  2365300                                                        --------->bZIP60(1)                                                    ------->MYC3                                                    -------->ABF1                                                    <-------MYC3                                                    ------->MYC4                                                    <-------MYC4                                                    ------->MYC2                                                    <-------MYC2                                                    <-------PIF5                                                    ------->PIF5                                                   >>>>>>>>>>AtMYC2                                                   --------->O2                                                   <---------bZIP60(2)                                                   <---------TGA1a                                                   >>>>>>>>>>HY5                                                   --------->TGA1a                                                   >>>>>>>>>>ABI5                                                   <---------O2                                                   --------->ANAC55(2)                                                   =========================MYC_MYB                                                 <---------ALFIN1                                                <---------REM1(2)                                               <-----------------PIF3(1)                                              --------->ANAC46      <-----------GT1                    <---------WRKY45           ------->GAMYB ---->MYB46(3)         ======================================bZIP_DOF --YAB1*TSS            <----------DOF2   <---------WRKY12        --------->MYB52(1)                 < -----GT1    --------->DOF5.7(2)         <---------WRKY38(1) --------->At4g35610      <-----------HVH21 ----------->CBF------->TEIL           <-----------HVH21<---------bZIP60(1)           <-----------TGA1 -----MYB52(2) <---------DOF5.7(2)   <---------ZAT6<---------ANAC55(2)        <---------GLK1(2)     -   aaaccaattcacatcgtgaacgtgacttttctatagctagtggtcaactcgacacgtggcatcatctcaacggtctccttgattctctcgtcatagaaac  2365400                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                               ------                                                                                              -------                                                                                            ------>MYB83                                                                                            ---------                                                                                            ------>MYB46(1)                                                                                          <---------MYB46(2)                                                                                          --------->MYB46(3)                                                                                          --------->AtMYB61                                                     <---------ANAC55(2)                 --------->ANAC46                                                --------->YAB1                        --------->MYB46(3)                                                <---------ICU4           --------->RVE1(1)<---------MYB111(1)          --------->WOX13(1)                    --------->ANAC46         <-----------GT1 --------->ANAC58 ---------ZAT14                               <-----------GT1        --------->AHL20(2)  --------->ANAC58 -------->ZAT14                             <---------AHL20(2)    <---------ANAC46  xxxxxxxxxxxxxxxxx   gatgcactgaatcaatctccataacttcagggcattgcccttctatataaacatcacatgtccctgtgtcttaaaatacctcttatcaaacaccaaacca  2365500 -------->RAV1(1)                                               <---------ANAC58 ----->ANAC46                                                   <---------ANAC58 ----->ANAC58                   <<<<<<<<<TBF1            <---------ANAC58                       ----- ----->ANAC58                <<<<<<<<<TBF1               <---------ANAC58                 <---------- --->AtMYB61              <<<<<<<<<TBF1                  <---------ANAC46         --------->LBD16 -->MYB46(3)         <---------ANAC58                 <---------MYB52(1)         --------->DEAR3(1)<- >ANAC46             <------------------------ANAC81<---------MYB46(3)          --------->DEAR3(2) <- xxx>smallRNA(se3)   <---------ANAC58           ------>ZmHOX2a(1)         <-----------ARR10 ---------   caccagaacagaactcagccatggcttcttcttcttcttctcttctaatcctagccgttgcttgtttcgtctcgctaatctcaccggcgatttcacaaca  2365600                                   --------->SPL7                                  <---------MYB52(1)                                 <---------SPL7                                <---------DEAR3(2)       --------->LBD16                                <---------ANAC58        <---------HSFB2a(2)                             <---------MYB52(1)        <---------LBD16                             --------->ARR14(2)       ------>MYB46(1)                             <-----------HVH21        --------->MYB52(1)                             <---------ARR14(2)       ------>MYB83                            <---------DEAR3(2)    <---------ARR14(3)   ------>MYB83                         ------>NtERF2            --------->ARR14(3)   ------>MYB46(1)                         --------->LBD16          --------->ARR11(3)   -------->P                        --------->ANAC46<---------MYB46(3)   --------->ANAC58 -->GAMYB               --------->DEAR3(1)        <---------ARR11(3)  ------>ZmHOX2a(1) -GT1        --------->ARR11(3) <---------ANAC58----------->ARR10    <---------MYB59          ------>ZmHOX2a(1) --------ANAC58        <---------LBD16  --------->MYB52(2)<---------MYB52(1)                 -------- --------ANAC58     <---------GLK1(1) <---------MYB52(1)--------->HSFB2a(2)           ------>MYB83  < >ANAC46  --------->ANAC46 --------->DEAR3(1)<---------ANAC46--------->ANAC58         ------>MYB46(1)   ggcttgcaaatcacagaacttgaactccgccggtccgttcgatagttgcgaagaccttccggtactcaattcctacctccattacacctacaattcctca  2365700                                                  <---------ANAC46                            --------->ANAC58      <---------ANAC58                            --------->ANAC58      <---------ANAC58                          <---------ALFIN1       <------NtERF2                         <------NtERF2          --------->MYB55(2)              ------>NtERF2                        ------>NtERF2           <---------MYB46(3)           --------->LBD16                       --------->ANAC46         ------>NtERF2               <---------ANAC46                    <---------ANAC58           <---------DEAR3(1)          <---------LBD16                 <----------DOF2               --------->ALFIN1            --------->SPL7             <---------MYB52(1)           --------->MYB52(1)         <-----------GT1         <------MYB83   <---------CCA1(2)<---------ANAC58  --------->ANAC46    <---------ANAC58--------->MYB52(1) <------MYB46(1)   <---------At4g35610---------->ID1  --------->ANAC58    <---------ANAC58--------->STY1(1)<---------ANAC46 ->TOE2(3) --------->ANAC46 --------->ANAC46 ------->GAMYB<---------ANAC46<---------STY1(1)<---------ANAC58 -------TEIL<-----------HVH21         --------->ANAC58<-----------HVH21--------->ZAT6      <---------ANAC58   aattcatctctctccgtcgctttcgtcgccactccatctcaagccaacggtggctgggtcgcttgggctattaaccctacggggactaagatggctggtt  2365800  Previous    Next  AGI:  At3g07390.1    Description:  AIR12 (Auxin-Induced in Root cultures 12); extracellular matrix structural constituent. Identical to Auxin-induced in root cultures protein 12 precursor (AIR12) [Arabidopsis Thaliana] (GB:Q94BT2;GB:O82442;GB:Q9SRS7); similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT3G25290.1); similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT3G25290.2); similar to CIL1 [Brassica carinata] (GB:ABS30419.1); contains InterPro domain Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613); contains InterPro domain DOMON related (InterPro:IPR005018) Range:  from: 2365307    to: 2366502    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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