Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->ALFIN1                                       --------->ANAC46              <---------ANAC58                                   <-----------HVH21                 <---------ANAC58                             ------>MYB46(1)                   <------MYB83                             ------>MYB83                      <---------MYB46(3)  ----------->HVH21                            --------->MYB52(1)                 <------MYB46(1)   --------->LBD16        --------->At4g35610 ----------->RAV1(1)            <------NtERF2         ----------->RAV1(2)   ===================HOX2a_HOX2a <----------DOF2          <---------ZAT2        <---------At4g35610   <------ZmHOX2a(1)       --------->AtMYB61               <---------At4g35610   --------->At4g35610 ------>P                  --------->MYB46(3)              --------->At4g35610 --------->MYB46(3) ---->MYB46(1) <------ZmHOX2a(2)--------->At4g35610        --------->ZAT2     --------->ATERF1(1) ---->MYB83--------->At4g35610--------->MYB46(3)        <------NtERF2<---------ANAC46 -------->RAV1(1)         --------->MYB46(3)         --------->At4g35610     --------->PCF2   <------   caacaggattagcagcgatcaattgctcaccaacagctttcacagcatcgataagagcggcagcttggttagcgtgaggcacccgctgatgcgaaattac  2327200                                                                           --------->ANAC46                                                                          --------->YAB1                                                                         <---------ATHB12                                                                       --------->WOX13(1)                                   <-----------HVH21                 ------>ZmHOX2a(2)                                <---------ANAC58                  -------->HAHB4                                <---------ANAC58                 --------->ICU4                    <---------ARR14(2)            <-----------GT1<---------YAB1                    <- <---------MYB59    --------->ARR14(2)   --------->RAP2.3(3) --------->ARR11(3)               ------- -----GT1 <----------DOF2       <---------ANAC46--------->YAB1--------->ICU4              ---------->DOF2   tgacctaagtagctctacggtgtatttggctgtagcctgtgagccctcaatcttactgtatgagataatgatccaatcagcaactatattcacaaagggt  2327300                                                                        ------->TEIL                                                                    <---------WOX13(1)                                                                  <---------MYB46(3)                                                                  --------->ATHB12                                                                 --------->WRKY38(1)         --------->ANAC58                                       <---------MYB52(1) --------->ANAC58                                              <-------GAMYB --------->ANAC46                <---------DAG2            --------->AtMYB61                        - --------->ANAC58  ---------->DOF2      <---------ZAT2     --------->DEAR3(1)                       < --------->ANAC55(2)        <---------At5g28300            <---------ALFIN1                  ------->GAMYB ----------GT1 ---------->DOF2   <----------DOF2          <---------MYB55(2)           <----------DOF2 ---->GT1--------->ANAC58  <-----------GT1                --------->MYB46(3)      <---------At4g35610   tttacgaaattaagccagaaagaaagaatttaccgctttctgagcttgttaacaaattccaccaccgttgattgaacgtctggcatcttctttaaccgaa  2327400                                                                          <------NtERF2                                                                         ------>NtERF2                                                                         <---------MYB46(3)                                                                         --------->MYB55(2)                                                                        <---------ANAC46                                                                       ------>NtERF2                                                                       <---------LBD16                                                                     <---------DEAR3(1)                                                                     <---------RAP2.6(2)                                                                --------->ARR14(2)                                   <---------MYB52(1)           <---------ARR14(2)                                 <---------ANAC58            --------->LBD16      >>>>>>>>>TBF1                                 <---------ANAC58           --------->ANAC46  <------ZmHOX2a(1) <---------TOE2(3)        ----------->RAV1(2)          <---------ATHB12<------NtERF2               <- -------->MYB52(1)      <---------ARR14(2)        --------->TOE1(3)  <---------RAP2.3(2)          --- -----------GT1         --------->ARR14(2)        --------->TOE2(3) <---------LBD16               ---   attaacgagaaacttgagaaaatgcgaaacctgaggcgttagatttcataaaccctaatcacgcgcgattcgcggcgggaggaagaagaaaatgggagaa  2327500                                                            <------NtERF2                                                            <---------DEAR3(1)                                                           <---------MYB46(3)                                                          <---------ANAC46                                                          --------->ALFIN1                                                        --------->MYB55(2)                                                        <---------MYB46(3)                                 <---------ANAC58      <---------AtMYB61                               <---------YAB1          <---------DEAR3(1)                             <---------GLK1(1)         --------->ALFIN1                       ------>NtERF2                  --------->ANAC58                  <---------DEAR3(1)                        -------                <------ZmHOX2a(1)<---------ANAC58   <---------DREB2C(2)                --------->ARR11(3)          <---------At4g35610--------->GLK1(1)      <---------ANAC46                   <---------ARR11(3)          --------->At4g35610--------->CCA1(2)   ----------->TGA1                      --------->GLK1(2) --------------AGL15        <---------ARR14(2)   ----------->HVH21              ----------->GT1 -------------->AG--------->ANAC58  -------->P <---------ANAC55(2)      --------->At4g35610 <-------- -------------->AGL1        --------->ARR14(2) --------->ANAC55(2)    <------ZmHOX2a(1)<-----------ARR10   gcctaatgtggaagatgaggaagcaaaatggatatgcttaccagtgaatatgtgacggtggtggggcgataaggagatgaagtagcaaaaatcttccggc  2327600                      <------ZmHOX2a(1)                    *TSS                <-------TEIL           <---------TOE1(3)                <---------YAB1     <-----------GT1        <------------CBF  <------MYB83     <------NtERF2              --------->YAB1   <---------RVE1(1)        <---------YAB1      <------MYB46(1)  <-------       --------->ANAC58       <---------GLK1(2)        ------------>CBF    --------->MYB59  ---------     --------->MYB52(1)       --------->ARR14(2)     <---------ZAT6        --------->MYB111(1) -->LBD16    ----------->GT1  <---------ARR14(2)     ----------->HVH21    <--------P        --------- -LBD16--------->ANAC58       <---------ARR11(3)<----------DOF2<---------TOE2(3)    <----------DOF2--   gagagagaaacggaattgataataggagaccagatttttacattcattcgctctagtgacaattgaaggttttttggtaggtctaacttttgggccgaaa  2327700                                                  <-----------ARR10                                                  <---------ARR11(3)                                                  --------->ARR11(3)                                                  <---------ARR14(2)                                                  --------->ARR14(2)                                             ---------->DOF2                                            --------->YAB1                       --------->ANAC58     <----------DOF2                       <---------YAB1                       --------->PCF2 --RAP2.6(3)                          --------->YAB1               <---------CCA1(2) >RAP2.6(2)                         --------->ANAC58             <---------AtLEC2--------->ANAC58 -->GT1                             --------->ANAC58         <----------DOF2   <---------PCF2 ------->DAG2     --------->YAB1    --------->ANAC46    ------>ZmHOX2a(1) <----------DOF2   taaggtgctatttgggcctaaaataagcccaaaaatacaagcattatcaaagtatctccttccctttgcatagcttctttgggacccaaattttagtttt  2327800                                                                                     --------->ZAT14                                                                               <---------MYB59                                                                              --------->ANAC58                                                                              --------->ANAC58                                    <------ZmHOX2a(2)        --------->ANAC55(2)   --------->MYB46(3)                                    <---------------------WRI1        <---------AHL20(2)                                   --------->ARR11(3)        <---------ANAC55(2) ------>MYB83                                   <---------ARR11(3)        --------->ANAC55(1) ------>MYB46(1)                               ---------->DOF2               --------->ANAC46------->TEIL    <---------TOE1(3)      <----------ID1       --------->ANAC58     --------->AHL20(2)   <---------ARR11(3)    <---------TOE2(3)   ---------->DOF2         --------->ANAC58   --------->TOE2(3) <---------ZAT14   gtttttgaggttttgagtcttttgacaaaaggagaaagatcaaattgaacaaggaaacttaacacataacataaaattgaacccaactacagtatctctt  2327900                                                      ------>ZmHOX2a(2)              <---------ALFIN1                       <------ZmHOX2a(2)             --------->ANAC46                       --------->AGP1           <---------ALFIN1                         --------->ARR14(2)                 <-------TEIL           --------->ANAC58                         <---------ARR14(2)                --------->CCA1(2)           --------->ANAC58                         <---------AGP1                    --------->GLK1(2)           --------->ANAC46                         <---------ARR11(3)                --------->ARR14(1)         ------->GAMYB                        --------->ANAC58                       <---------ARR14(2)         <---------ALFIN1                     --------->ANAC46                       <---------GLK1(2)         --------->AtMYB61                    --------->ANAC58               ----------->RAV1(2)        --------->MYB46(3)           <---------ARR11(3)        --------->ZAT14       --------->ARR14(2)      <-----------GT1            --------->YAB1     <-----------ARR10      ------->GAMYB  --------->At4g35610  ------>ZmHOX2a(1)           --------->GLK1(1)     --------->ARR11(3) --------->MYB46(3) <---------At4g35610 --------->TOE2(3)   <---------YAB1  --------->AHL20(1)        <---------ZAT14       --------->ARR11(1) <---------ANAC46<---------GLK1(2)   <---------AHL20(1)    >>>>>>>>>EIN3 --------->At4g35610   attccttataaccacaccacattcttattcagaaatcaaaatatttctaagcaagatctatacattgaactgaacaactgcctgagagattcggcagaaa  2328000                         <---------ARR11(3)                         --------->ARR11(3)                   --------->HSFB2a(2)                   <---------HSFB2a(2)                 --------->MYB52(1)             --------->ANAC46      <----------DOF2                          <------------------------ANAC81             --------->ZAT6     ------->TEIL -------->P                 <----------DOF2           <-----------GT1<------ZmHOX2a(2) <-----------GT1        <----------DOF2   catttctctatatatacactaccagaagatcatgaagcttttcttctaaccagacttgttcatcatatgcttttctttccttcttgttcttctgcattcc  2328100  Previous    Next  AGI:  At3g07300.1    Description:  eukaryotic translation initiation factor 2B family protein / eIF-2B family protein. similar to GTP binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT2G44070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42909.1); contains InterPro domain Initiation factor 2B related; (InterPro:IPR000649) Range:  from: 2324623    to: 2327620    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g07310.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48590.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93505.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93506.2); contains InterPro domain Protein of unknown function DUF760 (InterPro:IPR008479) Range:  from: 2327824    to: 2329807    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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