Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------ZAT2                --------->ZAT2                <---------At4g35610             <---------At4g35610          <---------At4g35610                           <------ZmHOX2a(2)       --------->At4g35610                             <---------ARR11(3)       <---------At4g35610    --------->ANAC46     --------->ANAC58    <---------MYB52(1)       <---------LBD16       --------->ANAC58 -------->SPL7  --------->At4g35610      <-----------TGA1 ---------->DOF2 -------SPL7<-----------RAV1(1)--------->LBD16     --------->ANAC46   <-----------GT1         <------   ggtacggtttgctgatgctgctgagaaaatacccggagcatttcgtcatcaacacgagatcaaagggaagagttacccttgaattcgtttccctcgttac  2299400                                                                                                 ----                           <---------ANAC46                                                  --------                   --------->TOE1(3)                                              --------->AHL20(1)                <-----------GT1        --------->CCA1(2)                          <---------AHL20(1)              <----------DOF2         --------->ARR11(3)                          --------->ARR11(3)              <---------DAG2<---------LBD16      <----------DOF2                --------->AHL20(1)           <---------ARR11(3)         <---------ARR11(3)       <----------DOF2  <---------AHL20(1)     --------->YAB1--------->TOE2(3)<---------TOE2(3)     <----------DOF2       <---------AHL20(2)  < -----GT1  --------->ARR11(3)       <---------YAB1   <-----------GT1      ----------->GT1   ---------   cctactctcatgagaactttaccttagtgactcggattaagatttaagaagcttttctctcttttctttgtttcatatgtaaaatattttggcattgatt  2299500                        --------->ANAC46                        --------->ANAC58                        --------->ANAC58                       --------->GLK1(2)                       ------->TEIL                           <---------ARR11(3)            <---------ANAC58    --------->ANAC58              <---------GLK1(2)    --------->ANAC46  <---------ALFIN1                        --------->ARR11(3)    --------->ANAC58 <---------At4g35610                     <---------RVE1(1)                <------    --------->ANAC58 --------->ZAT14                  <---------At4g35610      <---------ANAC58  <---------ALFIN1   <---------ZAT18------>NtERF2     <-------GAMYB            <---------ANAC58 ------->GT1<---------ANAC46    --------->ANAC58      --------->At4g35610 <----------DOF2 <---------YAB1 ->ATHB12   <---------ANAC58  ---------->DOF2    ------>ZmHOX2a(1)     <-----------GT1 <---------YAB1 -----------GT1  <-----------GT1--------->ANAC46<---------ANAC58   <------------------------ANAC81 >ICU4     ---------->ID1   ---------->DOF2     <---------ANAC58  <---------YAB1   <---------GLK1(2)   agtaacacgctgtgtcgtttttctgcacccaaaaacgccaacttcttggtccttgcagttgagagattttgattttctttttcttgattcttatttttga  2299600                                                                       --------->ARR14(2)                                                                  <------MYB83                        ---------->DOF2                           <---------ANAC46                     <---------------AGL15                        <------MYB46(1)                     --------------->AGL15                       --------->MYB55(2)                    --------->YAB1     <---------ANAC58          <---------DEAR3(1)               <--                    <-----------------AGL1                       --------->MYB46(2)              ----                 <----------DOF2       <---------ANAC58      <---------YAB1                   <------          <---------ARR11(3)          <-------TEIL        <---------MYB52(1)                 --------          <---------GLK1(2)       --------->AHL20(2) --------->GLK1(1) <---------ARR14(2)  ---------- ---YAB1  --------->ARR11(3)----------->GT1----------------->AGL1<---------MYB46(3) ---------->DOF2   taaacccatcgagatttttctttcatcaaagggcaaaaaattcgtgccaattcagaaatcgttatgttcggtggatttgggccataaaaagagaaaaggc  2299700                                                                                              -------                                 <---------ARR14(2)                                   <---------ANAC46                                 ------->TEIL----------->TBP                        --------->ARR14(2)                                 --------->ARR14(2)                                 <---------ARR14(2)                              --------->ANAC58            <---------KAN4(2)         <---------ARR11(1)                              <---------ANAC58         <------MYB46(1)              --------->ARR11(3)               ---------->DOF2<---------ANAC58       <--------P                    <---------CCA1(2) ----NtERF2  ------>ZmHOX2a(2)--------->ANAC55(2) --------->DAG2                   <---------ARR14(1) ----->RAP2.6(2)   --------->ALFIN1    ------------>CBF<------MYB83             *TSS------->TEIL----- ----ID1 --------->KAN4(1)    <---------ANAC55(2) <---------TOE2(3)     ----------->GT1     <-------- ->DAG2  <---------KAN4(1)    --------->ANAC58  ---------->DOF2        <---------TOE1(3)    --------- >DOF2  <---------KAN4(2)    <-------TEIL   --------->AHL20(2)      ----------------------->TaNAC69(2)   cgaaacagagaatgatccaaagtggctcaagtacgtatccagacaatataaaaaggttggaatgtgcaaacttagggttatactcgtatcttgtagcagc  2299800                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         --------->ARR14(2)                                                                         <---------AGP1 --------->HSFB2a(2)                                                                         <-----------ARR10                                                                         --------->AGP1<---------LBD16                                                                         <---------ARR14(3)        --   --------->ANAC58                                                      --------->ARR11(3)        <-   --------->ANAC58                                                      --------->ARR14(3)        <- ---------->DOF2                                                         <---------GLK1(2)<---------MYB52(1) -->ANAC46--------->GLK1(2)     <---------AHL20(2)                       <---------ARR11(3)        -- ---->MYB46(3)          --------->DAG2                <---------MYB52(1) <---------ARR14(2)   <------ -At4g35610            ---------->DOF2              <---------ANAC58    <---------CCA1(2)--------->LBD16 >At4g35610       <------ZmHOX2a(2)                 <---------ANAC58   ----------->ARR10<---------HSFB2a(2)   cactaaagcaaaattctgagatcgaaaaagctatataaaaaaaaaaaactgcttccgtttcatcgattttgtccagatcttccccttcttccggtaatcg  2299900                                                                   ==============================RAV                                                                   <-----------RAV1(2)                                                              ------>ZmHOX2a(1)                                                            ----------->RAV1(2)                                                          ------>ZmHOX2a(1)                                                        =============HOX2a_HOX2a                                                        --------->HSFB2a(1)                                                        <---------HSFC1(2)                          <                                                        <---------HSFB2a(1)                         -                                                        ------>ZmHOX2a(2)                           <                                                        --------->HSFC1(2)                   <-------               <---------ANAC58                        ==============HOX2a_HOX2a            ---------               <---------ANAC46                        <------ZmHOX2a(2)                   --------->DAG2               <---------ANAC58     --------->ZAT14   <---------ARR11(3)                 ---------->DOF2    --------->ANAC55(2)             <---------ZAT18   --------->ARR11(3)            <---------ETT(1)- ------->HSFC1(2)                <---------ANAC46     <---------ARR14(2)           --------->SPL7   - --------HSFC1(2)          ------>ZmHOX2a(2)          <---------GLK1(2)          <---------SPL7<----- --------At4g35610       --------->ARR11(3)           --------->ARR14(2)     <---------At4g35610    < ------->At4g35610       <---------ARR11(3)           --------->AGP1         <---------ZAT2<--------- ---------------WRI1--------->ICU4  --------->ZAT18  <---------At4g35610   <--------P----------->RAV1(1)   aagcttacgagatagttgagtgaagatgatctatgatgtgaactctggtctattcagatccttcctgagccagaagggtagctcgtccgacaaaaggtac  2300000 ---------ARR14(3)                                  ------>ZmHOX2a(2) -------->GLK1(2)                                  <------ZmHOX2a(2) -----------ARR10                                 <---------ARR14(2) ---ID1                                           --------->ARR14(2) -->GT1<---------ANAC58                           --------->AGP1 -------->ARR11(3)                                <-----------ARR10 -------->ARR14(3)                                --------->ARR11(3) --TEIL<---------ANAC58        --------->ARR11(3) <---------ARR11(3) ---------ARR11(3)          <---------GLK1(2)     <---------AGP1                                   <- ------AtSPL8    ------>ZmHOX2a(2)               <---------CCA1(2)                          ---------   aaaatcttgtcttgtctgatccaaatatgagattatctcgatgttgttcccagatctatctattgatgtgtcattcttctcatcttcttaattctcatca  2300100                                                                <---------MYB52(2)                                                                --------->MYB46(3)                                                           ----------->RAV1(1)                                                         <------NtERF2                                                         --------->At4g35610             --------->YAB1   --------->ANAC58          <---------ATERF1(1)     <---------YAB1           --------->ANAC58      --------->ANAC58 ---------DOF2  <------ZmHOX2a(1)                   --------->ANAC58       <---------YAB1 >YAB1   <---------AHL20(2) --------->CCA1(2)     ---------->DOF2------->GAMYB      --------->YAB1   tctttttatgtttaatcaggaaaatggaagataagccaagagaacagaagcccaaagccagcgacaacaaacctgttatgaatgaatgagaacagattac  2300200                                                --------->AHL20(2)                                              <---------TOE2(3)                                      <------ZmHOX2a(2)                                     --------->ARR11(3)                                     <---------ARR11(3)     <----------DOF2                            <-------GAMYB  <---------AHL20(2)                    --------------->AGL15  --------->AHL20(2)    ------>ZmHOX2a(1)                    <---------MYB59 <------ZmHOX2a(1)      <---------ANAC58                   --------->ANAC55(2)==================================HOX2a_HOX2a        <---------                 <-----------GT1    --------->YAB1         <---------ANAC58               <---------ANAC58               <----------DOF2     --------->ICU4     <---------TOE2(3)    <---------YAB1 <---------ANAC58   atcttcttgtaatttctctttacctatttcagttgtaaggatcattttaatgaattaagtttctttcctatggaattgtcatttgccaattggctttggg  2300300  Previous    Next  AGI:  At3g07220.1    Description:  transcriptional activator, putative. similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17274.1); contains InterPro domain Forkhead-associated (InterPro:IPR000253); contains InterPro domain SMAD/FHA (InterPro:IPR008984) Range:  from: 2297892    to: 2299578    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g07230.1    Description:  wound-responsive protein-related. similar to unknown [Populus trichocarpa] (GB:ABK93331.1); contains InterPro domain Wound-inducible basic (InterPro:IPR012643) Range:  from: 2299780    to: 2300273    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version