Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->At5g28300                                            ----------->GT1                                            --------->LBD16                                           --------->ATERF1(2)                                   <-----------ARR10                                  <------NtERF2                                 --------->LBD16                    <-------TEIL--------->DEAR3(1)                   --------->CCA1(2)       <---------ATERF1(2)      <---------LBD16          <---------LBD16                           <---------DAG2   <------MYB46(1) --------->GLK1(2)      <---------LBD16<---------HSFB2a(1)                  -------   <------MYB83   --------->ARR11(1)  <----------DOF2    --------->HSFB2a(1)                  ------- --->ZAT6 ----------->HVH21  --------->DEAR3(1)  --------->ICU4          <----------DOF2    --------- ----GT1--------->LBD16--------->ANAC46   <---------ANAC46           ---------->ID1   <----------DOF2   ccatttggtccggagacagagattcgagccatcgccggagctttgccggtaaaaatggaacctttcatcttctcgcttttgccaactcctttacaaaagc  2295100                                                                                    <---------ARR14(2)                                                                                    --------->GLK1(2)                                                                         --------------->AGL15                                                                         <---------------AGL15                                                                        ----------------->AGL3                                                                        <-----------------AG                                                                        ----------------->AGL2                                                                        <-----------------AGL2                                                                        <-----------------AGL3                                                            <---------ANAC46       --------->WOX13(1) -->ANAC58                                         --------->At4g35610  <-----------------AGL1 -->ANAC58   --------->ZAT6                      <-----------RAV1(2)    ----------------->AG       <- ->DOF2    <---------ARR11(3)        <---------YAB1<---------At4g35610  ----------------->AGL1     ==   accatgagtccaatatcactcccattgtctctctatctcttgattatgctctcagatgggttttgtgtcaaattccctaatttggcaatctgggttttgg  2295200                         ----------->GT1                      <------ZmHOX2a(1)              ------>ZmHOX2a(2)              ===============HOX2a_HOX2a                            --------->YAB1              ============================HOX2a_HOX2a               <---------ICU4             --------->At4g35610                                    -------->HAHB4             <---------At4g35610                                   <---------ATHB51            <---------AGP1                                         --------->ICU4               -----            --------->ARR14(2)             ----------->GT1       --------->YAB1             <-------MYC3            <---------ARR14(2)             --------->ALFIN1   ----------->GT1               ------->MYC3 -----ZmHOX2a(1)  ---------->DOF2      <---------ZAT14  <---------ANAC58               ----------->RAV1(1) ====================HOX2a_HOX2a   <------ZmHOX2a(1)    <---------ANAC58              --------->ANAC46   aggagagtgttttggatctgaaaaggatgggaatttaggagagaagtgtgaattggatgcgagttagtaataatgggattagggagacacaacacatgta  2295300                                              <------MYB46(1)                                              <------MYB83                                          --------->ARR14(2)                                          <---------ARR14(2)                           --------->TOE2(3) --------->MYB59                   --------->At5g28300  --------->LBD16                  ----------->GT1     <---------LBD16                                     <--------P                  <---------ANAC46    <-----------------AGL1                     <---------HSFB2a(2) -->TEIL   <---------MYB52(1)    <----------DOF2                                 --------->HSFB2a(2)   tgtgtctgtgtctgtttgtgctgtaaaaacatcaactttctccggatttggtctcgatgaagacccaagaatgggagaaaactcgagaagaggtaagtga  2295400                                                            <---------At4g35610                                                            --------->ZAT2                                                            <---------STY1(2)                                                            <---------ZAT2                                                            --------->At4g35610                                                          *TSS                                                        --------->ZAT2                                                        --------->At4g35610                                                      <------ZmHOX2a(1)                                                    <---------TOE2(3)                <-----------GT1                     ----------->GT1            <---------------AGL15            <----------DOF2 <---            <-----------RAV1(2)  <---------ZAT14<----------DOF2             <<<<<<<<<TBF1 <---------DAG2          --------->CCA1(2)      ---------->DOF2=====================================================         ----------->HVH21  --------->ICU4   --------------->AGL15       <<<<<<<<<TBF1    <----------DOF2   gagagaaacaagagacaggggaatcgtgaaatgagtaaagagatgtgcttctttaaggagctagctggggacttcttcttcttcttttatcacttttatt  2295500                                                      <------MYB83                                 <---------ANAC46     <------MYB46(1)            ---------->DOF2    --------->ALFIN1  <---------AHL20(2)                            ------     <---------AHL20(2)      <------------CBF  --------------->AGL15                         <------ZmHOX2a(1)     --------->AHL20(2)     --------->ATHB12   <---------------AGL15                         ========   <----------DOF2         --------->ICU4      <----------DOF2                               ========   --------->TOE2(3)       <---------YAB1     <-----------------AGL3                  --------->MYB52(1) ------AHL20(2)     ----------->GT1           <-----------------AGL2              --------->ANAC58 ===============================================================MADS_MADS         --------->ANAC58   tttttctttaattcaaaagaaaatgtataaagattgggggaaatgttttctttatttggtttaagtgtgtcattttgtaagaagaagcaaacagaggaaa  2295600                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 --------->ARR11(3)                 --------->ARR14(3)                 <---------ARR14(3)                                 <---------ZAT6                 --------->GLK1(2)                            --------->YAB1                     ----                 <-----------ARR10                           --------->ICU4                  <-------                 <---------ARR14(2)                          <---------YAB1              <----------DOF2                 --------->ARR14(2)                        --------->YAB1        <---------TOE1(3)                 <---------ARR11(3)                   <---------ANAC58           <---------TOE2(3)      ----------->HVH21                               <---------ANAC58       <---------ANAC58<------- ---->DOF2      <------ZmHOX2a(1)               <---------DAG2--------->ATHB12  --------->MYB52(1) =========================HOX2a_HOX2a         ------->TEIL<---------YAB1     <---------ANAC58<------- ========================HOX2a_HOX2a------->TEIL<----------DOF2 <---------YAB1<----------DOF2<-------   agtctagagtgacagagaggatctttgtacatgtgatgaacatggatggactttttgcttattatgattagtgttttttgcttaacgttttctttgcttg  2295700                                                                     ------>MYB83                                                                   <---------MYB59 ------>ID1         --------->TOE2(3)                           <-----------GT1 --ANAC46  --------->YAB1            <----------DOF2    <------MYB46(1)            <---------YAB1   - --AtLEC2  <---------ICU4     --------->ARR11(3)        <------MYB83 ------>MYB46(1)               -- --ANAC58 <---------ATHB12    <---------ARR11(3)       --------->MYB59          ------->TEIL      <-- --ANAC58 --------->ICU4     <---------CCA1(2)      --------->ARR11(1)  --------->YAB1           <---   tcgatttgtctaatcatggtttcattaacttatatctctctttgttatcaaatagatttggtcatttaaccaaattgtaatgtatatgattaccagtttt  2295800                                                                                                    <                                                                                                    <       <------NtERF2                                                                      <------MYB46(1)     <---------LBD16       --------->ANAC58                                 --------->ANAC55(2)     <    --------->RAP2.6(3)    --------->ANAC46                                 <---------ANAC55(1)     < ------>GAMYB              --------->ANAC58                                 <---------ANAC55(2)  <--- ------->MYB46(3)      <---------AHL20(2)               <---------YAB1     <-------TEIL   <------MYB83 ---------------AGL1  --------->AHL20(2)     --------->GLK1(1)            <-----------GT1 <---------MYB46(3) --------GT1  ----------->GT1      ----------------->AGL1--------->YAB1----------->GT1  <---------WOX13(1)   aaccatctcggcaaaaatgtaaaattaaaacgacatttccatttcagaaatctagcttataataaacttggaatagttacatgttgttagattggttcag  2295900               <---------AHL20(2)               --------->AHL20(2)        --------->ANAC58                                                                      -------        --------->ANAC58     --------->YAB1                                                  -------- <---------MYB46(3)     <---------ANAC55(2)                                                  -------- ---------AtMYB61       --------->ANAC55(2)                                                  <------- ---------YAB1 --------->AHL20(1)                                                           --------- ---------TOE2(3)  --------->YAB1                 <-----------GT1                      <---------ATHB12 ---------TOE1(3) <---------YAB1              <----------DOF2                        --------->WOX13(1) ------MYB52(1)<---------AHL20(1)             <---------DAG2                --------->GLK1(2)<-------   ttatggttgcaagtcaatttattatcacttatcagcattcaagtccaactttttacttcaaaacaaacaaaactagaaaatccaattcaatcaattttat  2296000  Previous    Next  AGI:  At3g07210.1    Description:  catalytic. similar to unnamed protein product [Vitis vinifera] (GB:CAO62426.1); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) Range:  from: 2292804    to: 2295458    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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