Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------ICU4                                                 --------->AHL20(2)                                                --------->ARR11(3)                                                --------->AHL20(1)                                             <---------AHL20(2)                                    ------>MYB83<---------ARR11(3)                                    ------>MYB46(1)      --------->AtLEC2            --------->CCA1(2)      --------->ANAC46    <---------ANAC58       ----------->GT1           --------->At4g35610   <---------ANAC58      --------->DAG2             ----------->RAV1(2) <---------AHL20(2)        --------->YAB1     --------->DAG2              <---------At4g35610 <-----------GT1           --------->AHL20(2)  <-    ---------->DOF2            <-----------GT1  <---------AHL20(1)    <---------ICU4          <------ ------->DOF2          ----------->GT1       --------->AHL20(2)      --------->ICU4    <---------YAB1   aaaagaaaaaggtgatatgaagtgcaagttaattcacctgccactaaaaaaatatttacttgcaaattgcaattagtacaataaaaaatatgactaattg  2288500                                                                        --------->At4g35610                                                                        <---------At4g35610                                             ---------->ID1         <-----------RAV1(1)                                         --------->ANAC55(2)     --------->ARR14(2)  --------->At4g35610                    <---------ANAC55(2)  --------->YAB1  <---------At4g35610               <---------CCA1(2)        <---------ATHB12               ------->TEIL ------TEIL                     ------>ZmHOX2a(1) <----------DOF2<---------ARR14(2)      --------->ICU4 ---WOX13(1)            <-----------GT1<-----------GT1     --------->WOX13(1)       ------>ZmHOX2a(2)   attcatctgccagtttttttaaaaaatgaccctccttcatatcacttgtcttctttactatcaatcatatatgctgctctctctgatcgaaatgaatatt  2288600                                                                 ----------->GT1                                                                 --------->MYB111(2)               <-----------GT1                                   --------->MYB46(2)            --------->YAB1                        --------->ARR11(3)           <---------YAB1                         --------->ARR14(2)               --------->At4g35610         --------->ATHB12        <---------AHL20(1)           ------------>MYB.PH3(2)              --         -------->ATHB1       <-----------GT1     <---------ARR14(2)               <---------At4g35610         <---------ICU4    --------->YAB1         <---------ARR11(3)            <-------TEIL     ----         --------->ATHB51  <---------ICU4         <-----------ARR10         --------->ALFIN1     <---        --------->ICU4  --------->TOE2(3) <------MYB83       --------->DAG2------->MYC3 <---------GLK1(1)        <---------ATHB51--------->YAB1    <------MYB46(1)  ---------->DOF2 <-------MYC3 --------->GLK1(1)   cagaaaacgaattattgtaacttcatccataataacatatttgtaggtagaatatctacatgaaaggtagttaaacatgtggttcatctgaaatctctcg  2288700                                                                          --------->DAG2                                                              --------->TGA2(2)                                                             <-----------HVH21                                                             <-----------TGA1                                                            --------->bZIP60(2)                                                            --------->bZIP60(1)                                                            <---------TGA1a                                                            <---------bZIP60(1)                                                            <---------O2 --------->SPL7                                                            --------->TGA1a                                        ===================================bZIP_DOF                                        ==============================bZIP_DOF                                        <----------DOF2     --------->ANAC58                                        =================bZIP_DOF      <-----------HVH21                                       <---------ANAC58     --------->O2<---------MYB52(1)                                   ------->MYC2             --------->ANAC58                                   ------->PIF5             --------->ANAC46                                   <-------MYC3<---------bZIP60(2)     <---------SPL7                                   <-------PIF5<---------TGA1a----------->HVH21              --------->GLK1(2)    ------->MYC3<---------O2 --------->ANAC55(1)              <---------ARR14(2)   <-------MYC2=======================bZIP_bZIP              --------->ARR14(2)  <---------ANAC58 <------NtERF2 <---------TGA1a           <---------ANAC58       --------->ALFIN1 ------>NtERF2 --------->TGA1a           <---------ANAC58       <---------ANAC58--------->RAP2.6(2)  <---------RAP2.6(3) ---->ZmHOX2a(2)          --------->ALFIN1     --------->O2 --------->ANAC55(2)      <------ZmHOX2a(1) ----->ARR11(3)  --------->HSFB2a(2)   <---------ANAC46     <---------ANAC55(2) <---------REM1(1) ------ARR11(3)  <---------HSFB2a(2)   <---------ANAC58    <-----------STF1  --------->ALFIN1   atcttgttcgtatgcgtttctggcacaagtggaagcgcgtggctttgagacgcggccaaaccacgtcacgagccgtaaggtgttgaaggagtcaatgtag  2288800                                                       --------->ANAC46                                                     <---------DOF5.7(2)                                                    <---------WRKY12                                                    <---------WRKY45                                                   --------->DOF5.7(2)                                                  --------->TOE2(3)                                                  <-----------HVH21                                               --------->ARR14(2)                                               <---------ARR14(2)                                               ------->TEIL     --------->AHL20(1)           --------->MYB52(1)               --------->ANAC46    <---------AHL20(1)      ------->TEIL          --------->ARR14(2)                --------->ANAC58 --------->AHL20(2)        <---------CCA1(2)          <---------ARR14(2)              --------->ZAT6   <----------DOF2         <---------ANAC46        ----------->ARR10   <----------DOF2 --------->ANAC58 <-----------TBP    <---------AHL20(2) <---------YAB1      --------->AtLEC2----------->GT1<---------WRKY38(1)   <---------ALFIN1        *TSS   actatgagagaagaaacggagacattcaaactttacagagagtaacacgaatcgtcaacgcctttatatattacacacacattttatgtgtatctctgtg  2288900                                          --------------->AGL15              --------->ANAC46        <---------CCA1(2)--------->ANAC58              --------->ANAC58      <---------ICU4     --------->ANAC58              --------->ANAC58     ------>ZmHOX2a(1)<------ZmHOX2a(2)           --------->AtMYB61       ========================HOX2a_HOX2a           <---------MYB59        --------->TOE2(3)--------->ARR11(3)              <----------DOF2    --------->GLK1(2)  <---------REM1(1) <-----------GT1           --------->At5g28300   tttcagaatcagacctaagccattgttgaagcctttcctcatttctccatttagatcaagaaatatggcagtaagttcgaaaactcttttctatctaaca  2289000                                     --------->ARR11(3)                       <---------MYB46(3)               <---------ALFIN1     <---------CCA1(2)         <-----------GT1     --------->YAB1        <---------CCA1(2)   <---------YAB1                                                  <--------   ----------->GT1     --------->MYB52(2)                            --------->MYB46(3)     <--------   <---------ZAT6    <---------MYB52(1)       <---------YAB1 ----------->TGA1 --------->ALFIN1   aaattgtgttatatccccctctcgtttgttatcatcttaaatcttgttatcaaaccatgttttatgacgaaaccatcagagtgttggaattttagcttgt  2289100                                   <---------AHL20(2)                                  --------->AHL20(2)                                  <---------AHL20(2)                       <----------DOF2                             <---------WOX13(1)                     ------>ZmHOX2a(2)                           --------->ATHB12                        <------ZmHOX2a(2)                           -------->ATHB1                          --------->CCA1(2)                           <--------ATHB1                         <---------AGP1                  <--                           <---------ICU4                         --------->AGP1                  <--                           --------->YAB1                         <---------ARR14(2)              <--     --------->ARR14(2)   --------->ICU4                          --------->ARR14(2)           <-----     <---------ARR14(2)   <---------ATHB12                        <---------ARR11(3)       --------->WRKY12 ------>ZmHOX2a(2)        <---------YAB1                          --------->ARR11(3)       --------->WRKY38(1) -ANAC58                  <---------ATHB51                       <---------GLK1(1)       --------->At4g35610 -ANAC58               ------------>ATHB5          --------->YAB1--------->GLK1(1)       <---------At4g35610   tgatccgaatttgtctgttcatttcccaatgattgtttaaattgtttgtttgatcatattagaacagagatctgagtctttgtttcatatcagttgactt  2289200             --------->At4g35610             <---------At4g35610   <---------ARR11(3)   --------->ARR11(3)                                        <---------YAB1  <---------CCA1(2)                                   <---------ARR11(3) -------ANAC58                                        --------->ARR11(3) -------ANAC46                                 --------->At4g35610              <-------TEIL      <-- -------ANAC58                                --------->GLK1(2)             <---------TOE2(3)  <----- -----DOF2<<<<<<<<<TBF1        --------->HSFB2a(2)---------->DOF2     <---------YAB1  <-------TEIL<--   tcgtatatattcttcttctgaattcaatctgttccagtatgtgttgagaagctaaagatagttctcataggtctgattagggttcatatacatatcgctt  2289300                                                                                                 ----                                                                                                <----                                                                                              -------                                                                                              <------                                                                                       <---------ANAC58                                                                                      --------->ATHB12                                                                                  --------->ATHB12  <                                                                                  <--------ATHB1-----                                                                                 <---------YAB1 <----    --------->At4g35610                                                          --------->ICU4 -----    <---------At4g35610                                                         <---------WOX13(1)---   ------->TEIL                                                               ------------>ATHB5----- -------ANAC58                         <---------ATHB12                  <---------YAB1<---------ANAC58 -----DOF2                   ---------->DOF2   <-----------GT1        <---------AHL20(2)<---------WOX13(1) -------ANAC58             <---------YAB1  <----------DOF2            <---------YAB1<---------WOX13(1)   tcttgcatctcaagtttgatattgaagtcattaaagctcaaatcacttttgaccattttctcaaaaacattttttattgttgaatgattgattgcagaac  2289400  Previous    Next  AGI:  At3g07195.1    Description:  proline-rich family protein. similar to defense protein-related [Arabidopsis thaliana] (TAIR:AT5G48657.2) Range:  from: 2288898    to: 2290511    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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