Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------HSFB2a(2)                                                                             <---------ZAT18                                                                             --------->ZAT18                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                       ------>ZmHOX2a(2)                                                                       ====================HOX2a_HOX2a                                                                      <------ZmHOX2a(2)                                                                      =====================HOX2a_HOX2a                                                                     <-----------ARR10                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                     --------->GLK1(2)                                            --------->ATHB12    --------->LBD16     ------>ZmHOX2a(1)                                            <---------ICU4     <---------HSFB2a(2)  --------->LBD16                                           <---------YAB1      --------->HSFB2a(2)  --------->HSFB2a(2)                                           ================================HOX2a_HOX2a   --------->ZAT14                         <------ZmHOX2a(2) ------>ZmHOX2a(1)     <---------LBD16   <---------ZAT18                        --------->ARR11(3) =================HOX2a_HOX2a         ---   <---------ZAT14            --------->ATHB12   <-----------RAV1(2)<------ZmHOX2a(1)          ------ -------->RAV1(2)            <---------YAB1=========================HOX2a_HOX2a   ----------->RAV1(2) --YAB1                ---------->ID1     <---------ARR11(3) ================HOX2a_HOX2a   --------->TOE1(2)   acctgagcacttatctttcaacttcttcgttttgattagaccaagatcattgcaggcgaagtcctccagaggatccgagcgtgctcctggaaacatgaga  2264200               ----------->GT1         --------->YAB1        <---------YAB1      <---------ICU4      --------->YAB1     --------->ICU4     <---------YAB1   <---------ICU4   --------->YAB1  <---------AHL20(2)  --------->AHL20(2)                          --------->LBD16  --------->ICU4                             <---------HSFB2a(2)           <---------DAG2  <---------ATHB51                           --------->HSFB2a(2)           <----------DOF2       <--- <---------AHL20(1)  <---------YAB1         <---------LBD16  --------->ANAC58                    <--- ------>AHL20(2)----------->GT1          <----------DOF2     --------->ANAC58                  ------ ----->GT1   ---------->DOF2       <---------YAB1            --------->ANAC46            <---------ZAT14   taaaataattatcagaaaagtttaaaattgaatttttcttattctttctggagaaaactaaacaaggaagagactcacttttagtaccgagtttagagag  2264300                                                                                          <---------TGA1a                                                                                          <---------O2                                                                                          --------->TGA1a                                                                                          --------->O2                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                   ----------->HVH21                                                                                  <-----------TGA1                                                                                  <-----------HVH21                                                                                 --------->ANAC46                                                                                 --------->ANAC55(2)                                                                                 --------->ANAC58                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC55(1)                                                                                 <---------O2                                                                                 <<<<<<<<<<HY5          --------->MYB52(1)                                                     --------->bZIP60(2)     --------->ZAT14                                                             --------->ANAC58     <---------ZAT14                                                             --------->O2    ----------->HVH21                                                            <---------bZIP60(1)   --------->LBD16                                                               --------->TGA1a  <---------ANAC58                     <---------ETT(2)                          --------->bZIP60(1)  <---------ANAC46                 <---------HSFB2a(2)                          <-----------STF1  <---------ANAC58                 --------->HSFB2a(2)            --------->ZAT18<---------TGA1a ------ANAC58             <---------ANAC58                   =======================================bZIP_DOF ------ANAC58             <---------ANAC46  --------->ANAC58 ==============================bZIP_DOF --->ARR11(3)             <---------ANAC58  --------->ANAC58 ---------->DOF2   <---------ALFIN1   cttgccgtgaactagcagagcatcggcttcgtgttttccagtagacaagcctctagcagagaagaaagtgagcaaagactgccacgtcacacaagtggca  2264400                                                                      <---------ARR14(2)                                                <---------MYB46(3)  ------>NtERF2                                       <---------At5g28300         <---------RAP2.6(2)                                    <----------DOF2                <---------ANAC46                                  --------->At4g35610              <---------DEAR3(1)                                XXXXXXXXXXXXXXXXXXXX>MIR397B      <---------LBD16              <---------At4g35610 <---------At4g35610             <---------At4g35610   <------ZmHOX2a(2)       <---------YAB1  <---------MYB52(1)     ------>NtERF2  <---------ARR11(3)    ----------->HVH21 <-------GAMYB       --------->ANAC46  ---------->DOF2   actagatcaaaacctctgcttatgaagtgaccattgagcttcaccgttgatggttcgagcccaaacgctgcggctatggctctaaagtctagtttctcgt  2264500               --------->ZAT14             --------->ANAC58             --------->ANAC46                                             ------>NtERF2             --------->ANAC58                                 --------->TGA1a            ------>MYB83                                      <---------ZAT2            ------>MYB46(1)                                   --------->ZAT2           <---------ALFIN1                                   ----------->RAV1(2)          ------->GAMYB                                     ------>NtERF2--------->ANAC58        --------->ANAC58                                   ----------->HVH21<---------ALFIN1        -------->P                                <---------ARR11(3)     --------->ANAC58        --------->ANAC58                          --------->ARR11(3)     --------->ANAC46    --------->AtLEC2                      ---------->DOF2  --------->DEAR3(1) <---------CCA1(2)   ---    --------->ANAC46                      ==============================bZIP_DOF       --------->At4g35610    --------->ANAC58               ----------->HVH21------>ZmHOX2a(2)   <---------LBD16<---------At4g35610    --------->ANAC58<xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    ------>ZmHOX2a(1)--------->LBD16      ------   cgttccaagcaacccactccacaatcttcgataccgagggacagaaaagtttgatcttcctccgacctgagtctcccgccatctctctctgcttagaagc  2264600                                                                                          --------->HSFB2a(1)                                                                                          <---------HSFC1(2)                                                                                          <---------HSFB2a(1)           <---------LBD16                                  <---------ETT(2)              --------->HSFC1(2)      ------->GAMYB                                         --------->ETT(2)            <<<<<<<ZML2     <---------MYB52(2)                       --------->MYB52(1)                     --------->HSFB2a(2)   --------->MYB52(1)         <-----------RAV1(1)   --------->SPL7             ------>MYB46(1)  <---------ATHB12           --------->ARR11(3)  ------->GAMYB                 ------>MYB83 --------->CBF        <---------HSFB2a(2)    <---------ALFIN1              <---------ARR11(3) --->At4g35610        --------->HSFB2a(2)------>NtERF2    --------->ZAT14  --------->ARR11(3)   tccaataacgaactctggagttttctagtaatatgttgctctctgccccaacggtacctctgtagacagacttctgagaccttccgactagaaccttcta  2264700                                                                  <------------CBF                                                                 <---------ICU4                      ----------->RAV1(2)                        --------->ATHB12                     ------>NtERF2                               <--------ATHB1               <-----------HVH21     ------------>CBF            --------->ATHB51              <----------DOF2   <------MYB83                    --------->ICU4          <---------ARR14(2)    <------MYB46(1)                 <---------ATHB51          --------->GLK1(2)    --------->MYB59               ------------>ATHB5                  <---      <------NtERF2 --------->DEAR3(1)                    <-----------HVH21                   -------     ------>NtERF2 <---------At4g35610                 <---------ANAC58            ------>ZmHOX2a(2)    --------->ATERF1(2) --------->HSFB2a(2)            <---------ANAC58  <----------DOF2 --------->MYB46(3)   cttgtgccagcgattcctttcagcgcctggaattaggtccccaattttgttagatgggcctgtcgaataattgggctttatttgatccctaaccactaat  2264800                                 <-------TEIL                               --------->ARR14(2)                               <---------ARR14(2)                               <---------GLK1(2)                            --------->ANAC55(2)                                            --------->KAN4(2)                            <---------ANAC55(2)                                       ----------->GT1                            --------->ANAC58                                          <------MYB46(1)                            --------->ANAC58                              --------->ARR14(2)                           <---------LBD16                                <---------ARR14(2)                    ------>ZmHOX2a(2)                               --------->ATHB12  <------MYB83                   <------ZmHOX2a(2)                           --------->DOF5.7(2)   <---------TOE2(3)                  <---------ARR14(2)                          <----------DOF2      --------->ICU4  <---------HSFB2a(2)     --------->MYB52(1)      --------->YAB1 <---------DOF5.7(2) --------->MYB59  --------->HSFB2a(2)    <---------ATHB12   ------->GAMYB   --------->LBD16   ----------->GT1      <- ------ICU4       --------->ARR14(2)       <----------ID1  <---------ANAC58 ------>ZmHOX2a(2)     <-- -->YAB1         <------ZmHOX2a(1)      --------->MYB46(3) <---------ANAC58<------ZmHOX2a(2)   <-----   acttccaaaaacattcaaaggatccaaatcacggattcgtcaacaacgacaaacataacatgcgcgttaatgactggatccagtaattaggtttattctt  2264900                --------->AHL20(2)            --------->AHL20(2)                                             <---------GLK1(2)            <---------AHL20(2)                                         ---------->DOF2            --------->AHL20(1)                                      --------->TOE2(3)            <---------AHL20(1)                                    --------->ARR11(3)      <---------TOE2(3)                                           <---------AHL20(1)   <---------MYB52(1)       <---------ANAC58                      --------->AHL20(1)   --------->DOF5.7(2)      <---------ANAC58                --------->ANAC58  <-------GAMYB <---------AHL20(2)                          --------->ANAC58  --------->TOE2(3)         <---------ANAC46                <---------ANAC55(2)            <--------- --------At5g28300  <---------ICU4             ---------->DOF2    <---------ARR11(3)  <---------YAB1 ---------GT1  --------->AHL20(2)         <----------DOF2   --------->ANAC46--------->GLK1(2)  ------ -----DOF2 --------->AHL20(2)         <----------DOF2       --------->ANAC55(2) <---------TOE1(2)   ttaccgttaatgaataaattaatctttgttccttgaatcgctttctttccaaaggcatttctacgtaatatcttaaagattctaggttatgttttacaaa  2265000      --------------->AGL15      <----------DOF2     --------->HSFB2a(2)     <-----------------AGL2 <----------DOF2          <---------HSFB2a(2)                                        <---------LBD16 --GT1<---------------AGL15                                        <--------HAHB4--------->ZAT14 ---->DOF2    <----------ID1                 ---------->DOF2      <---------ATHB12<---------ALFIN1   agtcttttcttttttggggacaaatgttacagaagtcttaaaatgcctaaagctacagagaggctcccatcatttactactgctacactcggaaaactaa  2265100  Previous    Next  AGI:  At3g07150.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN68821.1) Range:  from: 2263812    to: 2264582    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g07160.1    Description:  ATGSL10 (GLUCAN SYNTHASE-LIKE 10); 1,3-beta-glucan synthase. similar to CALS1 (CALLOSE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G05570.1); similar to ATGSL08 (GLUCAN SYNTHASE-LIKE 8), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G36850.1); similar to CALS5 (CALLOSE SYNTHASE 5), 1,3-beta-glucan synthase [Arabidopsis thaliana] (TAIR:AT2G13680.1); similar to putative callose synthase [Hordeum vulgare subsp. vulgare] (GB:AAO46087.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22010.1); similar to putative callose synthase catalytic Range:  from: 2264951    to: 2279389    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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