Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->AHL20(1)                                                                             <---------AHL20(1)                                                                             <---------ARR11(3)                                                                             --------->ARR11(3)                                                                         --------->ANAC58                                                                         --------->ANAC46                                                                      --------->TOE2(2)                                                                      --------->TOE1(2)                                                                      ------->GAMYB                                                                     --------->MYB46(3)                                                                     --------->DEAR3(2)                                                                    --------->ANAC46                           --------->LBD16                   --------->ARR14(2)                   <-- -------ARR11(3)          --------->ANAC46                   <---------ARR14(2)             <-------- ---ANAC58            --------->YAB1          --------->ARR14(2)    --------->ANAC58        <-------- ---ANAC58           <---------ATHB12         <---------ARR14(2)    --------->ANAC58  <---------YAB1 ---AtLEC2         --------->YAB1    ------>ZmHOX2a(1) ------>ZmHOX2a(1) --------->ANAC58   <--------   gatcaccatggtccatggctctaatcatccgaaataatcctctaagaagttctgttcctcacaaatatgcaacccacgatatattgttcttatttcttgg  2254100                                            <---------ATHB12                                           ------>MYB46(1)                          <---------AHL20(2)                                           ------>MYB83                             --------->YAB1     <-------TEIL                          -------->P             --------->AtMYB61 --------->AHL20(2) -------GLK1(1)                    <---------ANAC58           <---------ANAC58   ------>MYB46(1) -ANAC58            --------->ZAT6 <---------ANAC58           <---------ANAC58   ------>MYB83 -ANAC46   <---------GLK1(2)   <---------DAG2            --------->ALFIN1      <---------MYB59 -ANAC58 --------->AHL20(2)    <----------DOF2           <-----------RAV1(1)   --------->TOE2(3)-----   atatatgttcataaattctctatcacttctctacttttcttgcccaaccatatgtacaagtgttgcgaccatctccacaaacctaattaaaactggtcct  2254200                                                                             =====================HOX2a_HOX2a                                                                             <------ZmHOX2a(2)                                                                             <---------YAB1                                         --------->ARR11(3)                 --------->ARR11(3)                                         <---------AHL20(2)         ------>ZmHOX2a(1)      ----------                                         --------->AHL20(1)         --------->LBD16        ------>ZmHOX2a(1)                                         <---------AHL20(1)         <---------HSFB2a(2)    <---------                                      --------->AHL20(2)            --------->HSFB2a(2)   --------->TOE2(3)        --------->DAG2         --------->YAB1                       ================HOX2a_HOX2a       ---------->DOF2      --------->YAB1           <---------GLK1(2)      <---------ARR11(3)    <---------YAB1      <---------YAB1<---------AHL20(2)       <----------DOF2            --------->TOE1(3) ->ZmHOX2a(1)    <-----------GT1     --------->AHL20(2)  <-----------GT1---------->DOF2 --------->ICU4   tctgttataaaaagttgaattacattttgatcatcaaaattaaaatattgaaatagaattttcaactttcctcgaaaagatcatagagtaatccttaatt  2254300                    --------->ZAT6               --------->TOE2(3)               --------->TOE1(3)              --------->MYB46(3)     --------->ANAC46       <----------DOF2                      <-----------GT1        --------->ANAC46          -------- ----->AGL15   <---------DAG2    ------>ZmHOX2a(1)          <----------DOF2           --------->AHL20(2) ------AGL15<-----------GT1     --------->TOE2(3)           <---------DAG2     <----------DOF2   tagataattctttttcaccttaagactcgttcttccttactctttctaaccattccaaaacacttttacccacaaaattttctttcaatttaagaaggta  2254400                         --------->ATHB12                         -------->HAHB4                         ----------->GT1                        <---------ATHB12                    <---------AHL20(2)                 ----------->GT1  ----------->GT1                   <-----------GT1                 <              ---------->DOF2    ----------->GT1                   <------------------------ANAC81 --          --------->ANAC58      --------->DAG2                  <---------DAG2                 ------          --------->ANAC58    ---------->DOF2                   <----------DOF2        <----------DOF2    ---------->DOF2 --------->AHL20(2)                       <---------ALFIN1        *TSS      ------ --->GT1---------->DOF2 --------->ICU4    ------------>CBF<-----------GT1          --------->GLK1(1)-   aatgaaaaaagaaagcaaaagtttaaatgattaaaaggttaaaacacaatcccaaattttctaccacttttttctcatttttctgaattctttcattaag  2254500                                                                                <---------ANAC46                                                                               --------------->AtSPL3                                                                         ---------->DOF2      <---------ATHB12                                                --------->TOE2(3) ---------ARR14(2)                                                  <------NtERF2     <-----------GT1 ------->GLK1(1)                                            <-----------------------TaNAC69(2)    --- --->ANAC58                         ----------->GT1     ----------->GT1--------->DOF5.7(2)       ---- --->ANAC58                       <-------PIF5     <---------AtLEC2 --------->At4g35610     <-------- -------->ARR14(2)                ------->PIF5    <-------TEIL  <-----------HVH21--------->LBD16<----   caaatccaatgttttcgactctctaaattcaatgcacgaggtaacatttcgatgcatggagttaaatgtcagcgttaaagagccgtagtaactcgttagc  2254600                                  --------->TOE2(3)                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               <---------ARR14(2)                               --------->ARR14(2)                               <---------ARR11(3)                               --------->AGP1                               --------->ARR11(3)                              --------->GLK1(1)                              <---------GLK1(1)                          <------NtERF2                         ------>NtERF2                         <---------ERF1  <---------ARR14(2)          <----------DOF2                         <---------RAP2.3(1)                        <---------DAG2                        <---------DREB2C(2) --------->ANAC58     --------->DEAR3(1)                        <---------RRTF1(3)  --------->ANAC46     <---------ALFIN1                        <---------RRTF1(2)  --------->RAP2.6(2)  --------->AtMYB61                        <---------ANAC46 --------->ARR14(2)     --------->MYB46(3)                        <---------ATERF1(2) --------->DEAR3(1)--------->ANAC46                  -----                        <---------DEAR3(1)  --------->DREB2C(2)------>NtERF2                  <------                        <---------RAP2.3(3) ------->GAMYB     --------->DEAR3(1)             <-------                        --------->ATERF1(2) --------->ANAC58  <---------ALFIN1               --------                        <---------RAP2.6(2)--------->MYB46(3)--------->ATERF1(1)             <-------         <---------REM1(2)--------->ATERF1(1)               <---------ATERF1(1)           --------->SPL7        <---------HSFB2a(2)  ----------->ARR10 <---------ALFIN1<---------ATERF1(1)--------->RVE1(1)     --------->ZAT6     <---------RAP2.3(2)--------->DEAR3(2)<------NtERF2       <---------ARR11(3) ------>LBD16       <----------DOF2   --------->HSFB2a(2)   ------>NtERF2        --------->ARR11(3) - ----->RAP2.6(2)   <---------AtLEC2   <---------HSFB2a(2)  <---------ETT(2)      --------->GLK1(2)--- -MYB52(1)         <---------ANAC58<---------YAB1          --------->DEAR3(1)   <---------GLK1(2)---- -----LBD16        <---------ANAC58------>ZmHOX2a(1)     <-----------HVH21   --------->YAB1--------->ANAC46   cggactaagtctagacgctgtgcttggcggcgagatccttatagaaccgccatctctaccgtcgccaccacctttaccatcaaaatctcttgtaccgcac  2254700                                                                              <---------GLK1(2)                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                        ----------->HVH21                                                                       <-------MYC4                                                                       ------->MYC4                                                                       ------->PIF5                                                                       <-------MYC3                                                                       <-------PIF5                                                                       ------->MYC3                                                                       <-------MYC2                                                                       ------->MYC2                                                                      <---------bZIP60(2)                                         --------->ANAC58             --------->TGA1a                                         <----------ID1               <---------O2                                      --------->ARR14(2)              --------->O2                                      <---------ARR14(2)              <---------TGA1a                                    <------ZmHOX2a(1)                 --------->ANAC46                                    ==================================HOX2a_HOX2a                              --------->TGA1a                         --------->PIF3(3)                              <---------O2                         ---------------->PIF3(2)                              --------->O2                        <----------------PIF3(2)      --------->ANAC46        <---------TGA1a---------->DOF2   ------>ZmHOX2a(2)      --------->ANAC58        <---------ANAC55(2)             <------ZmHOX2a(2)      --------->ANAC58        <---------ANAC55(1)            <---------ARR14(2)      --------->LBD16    --------->MYB46(3)        --------->ANAC55(2)            --------->ARR14(2)     <---------ANAC58    ---------->DOF2           <---------ANAC58               <---------ARR11(3)     <---------ANAC58    ====================================bZIP_DOF             --------->ARR11(3)     <---------ANAC46 ---->DEAR3(2)                ==========================bZIP_DOF  --------->SPL7    --------->ANAC55(2) ---ALFIN1                    <---------ANAC58       <---------ZAT18  <---------PIF3(3) --ZAT14                  --------->YAB1 --------->ANAC46=======================bZIP_DOF    <-------- ->ZAT18                 <---------YAB1  --------->ANAC58---------->DOF2--------->ALFIN1    <-------- --SPL7    <---------ALFIN1--------->TOE2(2) ===================================bZIP_DOF    --------- -------->SPL7  <---------DAG2==========================bZIP_DOF <---------PCF5    <---------LBD16 ------>ORA47(1)========================bZIP_DOF     --------->ZAT18<---------ALFIN1<---------ANAC55(1) ----->DEAR3(1) <----------DOF2     =================================HOX2a_HOX2a  <---------At5g28300   cgtccaacaagccaaaccctttttgatatcatacgtgaggaatacgccaaagaagggcacaaagatcggaccacgtggcagattttccgtgagaaactcc  2254800                                                     <---------ARR14(2)                                                     --------->ARR11(3)                                                     --------->ARR14(2)                                                     <---------ARR11(3)                                                    --------->GLK1(1)                                                    <---------GLK1(1)                                                    <----------TaMYB80                                                   --------->ARR14(2)                  <---------AtLEC2                 ---------->TaMYB80                  <---------ANAC46                 <---------ARR14(2)        ------->TEIL                            <---------ANAC46        --------->MYB52(1)                  --------->ZAT2       --------->MYB52(1)                   <---------ZAT2     <---------MYB52(2)      <---------CCA1(2) <---------LBD16--------->TOE2(3) -HSFC1(2)      <---------YAB1        <---------ARR14(2) ------>ZmHOX2a(1) -HSFB2a(1)  --------->ARR14(2)       --------->ARR14(2)--------->TOE2(3)                           - >HSFC1(2)   <---------ARR14(2)      <---------CCA1(2)  --------->TOE1(3)                    --------   gtcttaaacgaaccggttctgcttggacctcgtctcttcatatccctgcttcggatatccttatccctaatcccaaacacattggaacagcgttccggtc  2254900                                                                                                    <                                                                                                    <                                                                                            ------>ZmHOX2a(2)                                                                                           --------->GLK1(1)                        <------ZmHOX2a(2)                                                  <------ZmHOX2a(2)                        --------->CCA1(2)                                                 <---------ARR14(3)                       <---------ARR14(2)                   --------->ARR14(2)            <---------ARR11(3)                       --------->AGP1                  <---------ZAT2                     <---------ARR14(2)                       <---------AGP1                  ----------->RAV1(2)                --------->ARR14(3)                       --------->ARR14(2)            <---------ALFIN1                     --------->ARR11(3)                       <---------ARR11(3)          ========================HOX2a_HOX2a    <----------                       --------->ARR14(3)          <------ZmHOX2a(2)                      --------->ARR14(2)                --------->TOE2(2)--------->ANAC58 --------->ARR14(2)                      <---------ARR11(1)       <---------DEAR3(2)------>ZmHOX2a(2)        <---------ARR14(2)                     <---------CCA1(2)       ----------->GT1 <---------ARR14(3)         --------->ARR11(3)                  <---------LBD16    ------>NtERF2      --------->ARR11(3)         --------->AGP1                   --------->ANAC46<-    --------->LBD16   --------->GLK1(1)      <-----------HVH21          --------->ANAC58 <---------ARR14(1)   --------->DEAR3(1) <---------GLK1(1)     <---------bZIP60(1)         --------->ANAC58----------->ARR10   --------->ANAC46 --------->LBD16         --------->bZIP60(1)     <------ZmHOX2a(1) --------->LBD16 -------->ANAC46--------->TOE1(2)--------->ANAC58<---------At4g35610===============================HOX2a_HOX2a ->LBD16    <-----------GT1      --------->ANAC46--------->At4g35610==============================HOX2a_HOX2a   tcactccgccggtttaaacatccgagatctggttcacgctataccgatgtcagatccacctggttcttcaggacgcgctatgttcacgcgcggatcttca  2255000  Previous    Next  AGI:  At3g07120.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G13100.3); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G13100.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN64493.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 2254485    to: 2255748    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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