Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ANAC58     <------ZmHOX2a(1)  <---------ANAC58   --------->LBD16 --------->ZAT2   <---------TOE1(2)    <---------ANAC58  --------->HSFB2a(2)   <---------ANAC46  <---------LBD16  <---------At4g35610  <-----------RAV1(2)   <---------bZIP60(2)   --------->YAB1  <---------HSFB2a(2)  <------NtERF2   <---------ANAC58 <---------LBD16   --------->At4g35610 <---------ANAC46          --------->TOE2(3) --------->bZIP60(2) -----DAG2         <---------ZAT2      <---------ANAC58          <---------DAG2    <---------CCA1(2) ----GT1 --------->ATHB12      --------->ANAC58               <-----------GT1 ------>ZmHOX2a(1)<-----   tttcccaggagtgattgtgagagctggcgtgccaagccttggcttaaatcatagacattcaatgttaccttatgcgcttcctgccatatcacatatatca  2244400                                                                                                    -                                                                                                   --                            ------->GAMYB                                                          --                           --------->ANAC46                                                       ---              --------->MYB52(1)          ------->TEIL                --------->TOE2(3)           ---        --------->YAB1     --------->ANAC58                    <-----------ARR10                  <--       <---------ATHB12    --------->ANAC58                    --------->GLK1(2)                  ---     --------->WOX13(1) <---------WRKY38(1)       ----------->GT1--------->YAB1           ------>ZmHOX2a(1) ------GT1  <---------MYB52(2)   --------->AHL20(2)     ---------->DOF2            ---------->DOF2---   ccaatttcaatcaaactaacaacgaggcaacgcaattaactacgaaccagaaatgaaaaaaagagaatcatacctcagccattgtcaaagtccttgaaac  2244500       ----------->RAV1(2)      -------->P      --------->MYB52(1)    <---------MYB46(2)    <---------MYB111(2)  <---------DOF5.7(2) -------->DOF5.7(2)                                                                 --------->MYB46(3) ------->TOE2(3)                                   <---------ARR11(3)            --------->LBD16 ------->TOE1(3)                                   --------->ARR11(3)      --------->ATHB12 ------>ANAC55(1)                                 --------->YAB1           <---------ICU4 ------>ANAC58                                   <---------ATHB12         <---------YAB1 -------ANAC55(2)              --------->YAB1    --------->ICU4           --------->ICU4 ------>ANAC58           --------->YAB1     --------->YAB1        ----------->RAV1(1) ------>ANAC46      --------->AHL20(2)<-----------GT1------>ZmHOX2a(2)  --------->YAB1           ----   acgttaactacctgaagaaaaaaaaaatcaaaatcaaaatttacaatcgcaatgatctaagacctgagcaacaagaatgattccgaacaaactatatcag  2244600                     --------->TOE2(3)                   --------->ARR14(2)                   <---------ARR14(2)                                              ----------------->AGL3                   --------->ARR11(3)                                       ----------->GT1                   <---------ARR11(3)                                --------->ANAC46  <---------ARR14(2)                   <-----------ARR10                                 <---------------AGL15                  --------->GLK1(1)                                  --------------->AGL15--------->HSFB2a(2)               --------->LBD16                                       --------->ANAC58  --------->ARR14(2)              --------->ANAC46                                       --------->ANAC58  --------->GLK1(2)           <---------ARR14(2)   --------->ARR14(2)                  ----------------->AGL3<---------HSFB2a(2)          <---------GLK1(1)     <---------ARR14(2)                  ================================MADS_MADS        <---------GLK1(2)      ------>MYB83                         <---------LBD16----------------->AGL2    ---------->DOF2--------->GLK1(2)                              --------->ARR14(2)<---------------AGL15 ------>MYB83<---------LBD16   ------>MYB46(1)             --------->ARR11(3)    --------->GLK1(2)  < ------>MYB46(1)  <---------CCA1(2)--------->TOE2(3)   ---------->DOF2--------->LBD16  <---------ARR11(1) ----->AGP1--------->ARR14(2)<---------MYB59    --------->LBD16   <---------ARR14(2)--------------->AGL15   acctacaaaagaatttccgcaaatcttaagaccaaatccataatcgattccgaacaaaaaagaactagtatccgcaaatagaaaatccaaatctagaaac  2244700                                                                     --------->ANAC55(2)                                                                     --------->ANAC55(1)                                                                     --------->ANAC46                   <---------AHL20(2)                                --------->ANAC58             <---------WOX13(1)                          <-------TEIL<---------ANAC55(2)           --------->ATHB51                           --------->ANAC55(2)                         ---           --------->ATHB12                           --------->ANAC58              --------->ANAC58          <---------YAB1                              --------->ANAC58--------->TOE2(3)           <--        --------->ANAC55(1)                           <---------ANAC55(2)           --------->ANAC58        --------->ANAC46                      --------->CCA1(2)      --------->ANAC58            ----        --------->ANAC55(2)       --------->DAG2     --------------->AtSPL3      --------->At4g35610        <---------ANAC55(2)      ---------->DOF2     <---------------AtSPL8      <---------SPL7  <--- <---------HSFB2a(2)         <----------ID1  <---------ARR14(2)     <-------TEIL <---------At4g35610 ---------LBD16   --------->AHL20(2)       ----------->ARR10  --------->YAB1     <------NtERF2 ------   aatcgggaacacataattgataaaattgatagcgagaaagcgagggagatttgatcacgtacaaacaaaatacgtaaactggccgctcggaaaattgtcg  2244800                                                                                     ------>ZmHOX2a(1)                                                                                --------->KAN4(2)                                                                                <---------GLK1(2)       --------->ARR14(2)                                                      <---------HSFC1(2)       <---------ARR14(2)                                                      <---------HSFB2a(1)       --------->GLK1(2)                                                  <-------TEIL      --------->GLK1(1)                                                  --------->GLK1(2)      <---------CCA1(2)          <---------MYB46(3)                      --------->CCA1(2)      <---------GLK1(1)     ------------>CBF                            --------->ARR11(1)     <-----   --------->LBD16        *TSS  <---------ATHB12                        <---------ARR14(2)  <--------  --------->ANAC46  <---------ANAC46                                    --------->ARR14(2)  <-------- <---------LBD16    <---------ANAC58                        --------->ANAC58   --------->HSFB2a(1) ------>CCA1(2)     <---------ANAC58                        --------->ANAC58   --------->HSFC1(2) -------GLK1(1)  <---------GLK1(1)                   ---------->DOF2   --------->HSFB2a(1)  --------- ----->ARR14(2)  --------->GLK1(1)             --------->MYB52(2)      <---------HSFC1(2)--------->ANAC46 ------ARR14(2) <---------ARR11(3)             <---------MYB46(3)      <---------HSFB2a(1)  --------- --->ETT(2)     --------->ARR11(3)             ----------->GT1  <------------CBF<---------ARR14(2)   atatgcgcaaatctgaaagatttcttggatagcaatggttcagagaggtttgttataaaggcaagctattgggagattcgaagattcctctacgacgtcg  2244900                                                                                             <-------                                                                                             <-------                                                                                         <-----------GT1                                                                                       <-----------GT1                        <---------ETT(2)                     ------>MYB83      --------->bZIP60(2)                        ----------->HVH21                    ------>MYB46(1)   --------->ANAC58         --------->WRKY45                               <-----------GT1        --------->O2 ---------         --------->WRKY38(1)                         --------------->AtSPL8    <---------O2 ---------         ----------->HVH21     <----------DOF2       <---------------AtSPL8    --------->ANAC58  <---------At4g35610   --------->MYB46(3)          ---------->DOF2            <---------TGA1a ----ANAC46             --------->ETT(2)            =====================================bZIP_DOF --- -O2     --------->WRKY12------>NtERF2           --------->HSFC1(1)            ====================== -bZIP60(1)          --------->TOE1(2)           <---------HSFC1(1)            --------->TGA1a  <---- >O2   <----------DOF2  --------->DEAR3(1)       --------->HSFB2a(2)           ====================== >bZIP60(1)         --------->DEAR3(2)           <---------HSFB2a(2)  --------->ARR11(3)<-----------GT1   tttaagctactttgacccctataccgacgaccgcttttattctgtaaccttctagaaagtaccatccaataagacattgccacgtctattttccccgtcc  2245000        ------>MYB83        ------>MYB46(1)      ------->GAMYB      --------->DEAR3(1)     --------->DEAR3(2)     --------->MYB46(3) ----HVH21 --SPL7--------->ORA47(1)           ----------->GT1          <<<<<<<<<GATA-1          <------MYB46(1) >DEAR3(1)    --------->GLK1(2)     <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    ------------>AtMYB77 >ANAC46-------->P             <---------At5g28300          <-----------GT1   <------ZmHOX2a(1) ------>LBD16 <---------ARR11(3)  <---------At4g35610     <---------AHL20(2)  ======================= =============MYC_MYB      <---------ICU4             ------>ZmHOX2a(1) <---------WOX13(1)  --------- -----LBD16  <---------GLK1(2) ---------->DOF2   <---------GLK1(1)    --------->ATHB12<------MYB83 <- ================MYC_MYB--------->YAB1           --------->GLK1(1)   <---------YAB1 <---------MYB52(1)   cggttcaaccgaccagaatctttgaatcagaattacagcagttaaaaattgaaatcctaatttatctatttgtgattgcaggaacagttggtcttacagc  2245100                                                                                                   <-                                                                                                   --                                                  <---------ANAC58                                 --     <---------At5g28300                          <---------ANAC58                               ----    --------->YAB1                               <-------TEIL                     --------->AHL20(2)   <---------ATHB12                          <---------ATHB12               --------->ANAC46     ----   --------->MYB46(3)                       ------>MYB46(1)        <---------TOE1(2)             <--- --------->WOX13(1)                         ------>MYB83 --------->AtLEC2 <-----------GT1     ------- =====HOX2a_HOX2a          <---------DAG2  --------->MYB52(1)      <---------TOE1(3)      --------->YAB1 ->DOF2                    <----------DOF2--------->TOE2(2)        <---------TOE2(3)  <---------AHL20(2) -----ZmHOX2a(2)         ------->TEIL     --------->TOE1(2)   <-----------ARR10 --------->TOE2(3)<---   gatcaatcaccgtattgtttatgtatgaactttaccgatgtataccaacgatgcgtttcatccaaatctaaggttttcacaacattatttattcataaaa  2245200              --------->ZAT6                          <-------TEIL          <---------AHL20(2)                   <------ZmHOX2a(1)  <---------AHL20(2)                         --------->MYB59                                 <------- --------AHL20(1)                     <---------------AGL15                                --------->ANAC58 ------->AHL20(2)                     --------->TOE1(3)                                    --------->ANAC58 ------->AHL20(1)                     --------------->AGL15                            --------->DEAR3(2) ----->AHL20(1)                       ----------------->AG                        <---------HSFB2a(2) ----->ARR11(3)                       ----------------->AGL1                 <---------AHL20(2) ------AHL20(1)                       --------->TOE2(3)             ------->GAMYB --------->HSFB2a(2) -->AHL20(2)<-----------GT1        <-----------GT1  <---------GLK1(2)       --------->AHL20(2)------- ------ARR11(3)             ----------->GT1 <---------ICU4        <---------At4g35610<<<<<<<ZML2   atattttaaaattttaacagtagcatcttcttgttaataaccctaattaggacagattcatgaactgcaactcccaaaataaatctagaacagacgcaca  2245300  Previous    Next  AGI:  At3g07090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46108.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580) Range:  from: 2243004    to: 2244826    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g07100.1    Description:  protein transport protein Sec24, putative. Identical to Protein transport protein Sec24-like At3g07100 [Arabidopsis Thaliana] (GB:Q9SFU0;GB:Q56WS8;GB:Q8L7A7); similar to CEF (CLONE EIGHTY-FOUR), transporter [Arabidopsis thaliana] (TAIR:AT3G44340.1); similar to hypothetical protein OsI_014124 [Oryza sativa (indica cultivar-group)] (GB:EAY92891.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ51900.1); similar to hypothetical protein OsJ_013037 [Oryza sativa (japonica cultivar-group)] (GB:EAZ29554.1); contains InterPro domain Sec23/Sec24 trunk region; (InterPro:IPR006896); contains InterPro domain Zinc finger, Sec23 Range:  from: 2245170    to: 2250705    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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