Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ARR11(3)     <---------ARR11(3)     --------->AHL20(1)    <---------AHL20(2)  --------->AHL20(2)                          --------->AtLEC2  <---------AHL20(2)                          --------->ANAC58 -------->AHL20(2)                            --------->ANAC58                          --------->LBD16 --------AHL20(1)                     --------->ARR14(3)                            --------->GLK1(2) ------->AHL20(1)                     <---------ARR11(3)           <---------------AtSPL8         --- ---->AHL20(2)         --------->YAB1 --------->ARR11(3)     --------------->AGL15 <---------GLK1(2) -->AHL20(2)          <---------ATHB12--------->ARR14(2)     <---------------AGL15 --------->ARR14(2) -->AHL20(1)        --------->WOX13(1)--------->GLK1(2) <---------ANAC58           <---------ARR14(2) ->YAB1      <---------MYB52(1)       <---------ARR14(3)<---------ANAC58   ---------->DOF2        ---   atatatatatattcagtttgttcaatcacagaattagcaaaatcttccaagcacatttgcttccacaatatagtacatgaagccagattccgaaactctg  2240600                                                                                       --------->AHL20(1)                                                                                       <---------AHL20(2)                                                                                       <---------AHL20(1)                                                                                 <------MYB83                                     --------->LBD16                             <------MYB46(1)                      --------->ANAC58                                           ----------->GT1             --------->ANAC58       <---------LBD16                           <-------GAMYB             --------->ANAC58    --------->ANAC46                        --------->WRKY12  --------->AHL20(2)          ------->GAMYB     <-----------ARR10              <---------ARR11(3)<-----------RAV1(1)         --------->ANAC46   <---------ARR11(3)       --------->ARR11(3)  --------->WRKY38(1)---------         --------->ANAC58   --------->ARR14(2)       <---------ARR11(3)<---------At4g35610 <---------AHL20(2)         --------->ANAC58   --------->ARR11(3)      <---------CCA1(2)  --------->At4g35610--------->AHL20(2) ------>ANAC58        --------->ANAC58        --------->ZAT6  <----------DOF2<---------MYB46(3) ------>ANAC58      --------->DEAR3(1) <------ZmHOX2a(1)<----------DOF2<-------GAMYB   --------->AHL20(2)   aagccagtacaacgcaagaacaccgagcaatatctactccaggaattgactctagtatctttatctttagctctgttgactgttggtaataaattaatca  2240700                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               <---------AGP1                                                               --------->AGP1                                                               --------->ARR14(2)                                                               <---------ARR11(1)                                                               <-----------ARR10                                                               <---------ARR14(2)                                                               <---------ARR11(3)                                                              <---------ARR14(1)                                                              <---------CCA1(2)                                                             --------->LBD16                 <---------ANAC58                          <---------LBD16                 <---------ANAC46                    --------->YAB1                 <---------ANAC58                    --------->ATHB12               <---------AtLEC2  <---------ANAC46                                   <--------HAHB4                <------NtERF2  <---------ANAC58                                   <---------ICU4         <---------bZIP60(2)  <---------ANAC58         --------->HSFB2a(2)    --------->WOX13(1)        <---------O2 <---------YAB1 >WOX13(1)      --------->MYB52(2) <-----------HVH21<---------ATHB12     ----------->HVH21  <--------   agtttcgtcgaactgggttccttgtatgtctagagcctgtcgaagactgttccaatcatttgccggatctatgttttgacgaggctgcatgatcaatatt  2240800                                                                                             --------                                                                                      <----------DOF2                                                                                      ------>ZmHOX2a(1)                    <---------CCA1(2)                                          ---------->DOF2      <                <---------ANAC58             --------->At4g35610             --------->ANAC58-------- -YAB1          <---------ANAC58             <---------At4g35610             --------->ANAC58--------   gaagagactagagagagttcgtgtctcttgagtcttgactaatactcagcaaaactacaagaagtctaaatagaagaacaagaaagtcctttaatacgac  2240900                          <---------ANAC46 <---------TOE2(3)      <---------ANAC46                                ----------->GT1 <---------TOE1(3) <---------ANAC58                              <------------CBF ->ANAC58       <----------DOF2                                --------->ARR11(3)                   < -----------RAV1(2)<---------ANAC58                         <---------TOE1(3)              --------->YAB1 ->ANAC46      <---------ANAC58                             <---------TOE2(3)  ---------->DOF2      - ->ANAC58      <---------ANAC58                            <-----------GT1  --------->YAB1<-------TEIL   attcaggttatagggtttctttcgtcttgtgtattaaacaaaattgggctacaaatgtttttaacgatattgggccgataataaagcccatattcatact  2241000     ------------>CBF    --------->LBD16    ------>NtERF2                                                                       <---------ARR11(3)   --------->ANAC58                                                                     --------->ARR11(3)   --------->ANAC46                                                                    --------->CCA1(1)   ------->GAMYB                          *TSS                                         --------->RVE1(1)   --------->ANAC58                    <------NtERF2                               <---------AHL20(2)  --------->MYB46(3)                  <---------At4g35610    <---------DAG2        --------->AHL20(2) ---------ARR14(2)              <------------CBF             <----------DOF2 ----------->GT1 -------->ARR14(2)             --------->ATHB12             <---------DAG2<----------DOF2           <   cacatccgccaatctctcttctctctcgctctctcattggcgctgtttatctgaattcgatacctttttgttttttctttggtaaataaatatctgattt  2241100                                                                    =================================                                          <---------GLK1(1)         =================================                                    <------ZmHOX2a(2)               ==================HOX2a_HOX2a                                   <---------ARR14(2)               ------>ZmHOX2a(1)                                   --------->ARR14(2)           --------->ZAT18                   ---                           ----------->HVH21             <---------TOE2(3)     <------ZmHOX2a(2) <---             <---------MYB52(1) <------NtERF2            <---------TOE1(3)     <---------ATHB12 <----         <<<<<<<<<<<<<<<<<LFY  ------>NtERF2  <-----------RAV1(1) <---------ANAC46       <---------MYB46(3) ----------DOF2<---------MYB46(3)--------->DEAR3(1)   ----------->HVH21  <-----------GT1 --------->MYB52(2)   cgcttttgaatcgccattggttgaacaatttgacgccgatctagatttctgtcgctgtgaaggtagtgtcctgtttttccgatcaattggtttgttccga  2241200                                                                  <---------ANAC58                                                      ------>ZmHOX2a(2)         <---------DOF5.7(2)                         <------ZmHOX2a(2)        --------->ARR14(2)                          --------->AGP1<---------ANAC58        <---------ARR14(2)                          <---------ARR11(3)                         ------       --------->DOF5.7(2)                         <---------GLK1(1) <-------GAMYB<---------ZAT6 ====HOX2a_HOX2a                                   --------->GLK1(1)--------->ALFIN1  <---------AHL20(2) ===HOX2a_HOX2a                        <---------ANAC58       --------->ATHB12    ----------->GT1   - --->ZmHOX2a(2)        <---------YAB1  <---------ANAC58      <-------TEIL       <---------ANAC58    < ---ZmHOX2a(2)<----------DOF2         <---------TOE2(3)<----------DOF2          <---------ANAC58 <--- -----MYB52(1)<---------DAG2         <-----------GT1--------->ARR11(3) <---------REM1(1)      <------   tcgtttctcgtttacgctttttgttatccttgagaaattttacgttgcaagagagatctttgattcatgggtgttgaagcattcgtgttaaaatgtatga  2241300  --------->YAB1              <---------ARR11(3)  ------>ZmHOX2a(2)    <---------At4g35610 --->ATHB12            --------->At4g35610          <-------TEIL -------->ARR11(3)   <---------ZAT18               --------->GLK1(2)                    <-------GAMYB ---------ARR11(3) <-----------HVH21            <---------TOE2(3)                    <---------ANAC58 ------WOX13(1)  ------>ZmHOX2a(2)        <---------YAB1  <---------------AtSPL3     <---------ANAC58 ---YAB1        <------ZmHOX2a(2)<---------ANAC46  --------->CCA1(2)  ---------->DOF2<---------ANAC46   ttgatcttaatcagtgagatcggtgagctcaagttctgtgttttgtaattgagattcgaagaggtatgtcaacaaagttatggagatgggtgttagggct  2241400                                                                 XXXXXXXXXXXXXXXXXXXX>MIR870                                                                <---------At4g35610                                                         <---------MYB46(3)                                                         <---------ANAC46                                                        <---------AtMYB61              <---------MYB52(1)<---------ANAC46        --------->ALFIN1             <---------At4g35610<---------ANAC58--------->ZAT14 --------->ZAT2             <-------GAMYB      <---------ANAC58<---------ZAT18 --------->At4g35610          <---------At5g28300   <---------RAP2.6(2)   <-----------RAV1(1) <-----------GT1 <----------DOF2 <-----------GT1               <---------LBD16  <---------ZAT14 <---------ZAT2 <---------MYB52(1)----   gatatacctatttgccgttgccacgatttggattgcggctagttttgtagtccagtctgtggtggaagctggtgtttctccgttcttgatcactttcatt  2241500  Previous    Next  AGI:  At3g07080.1    Description:  membrane protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46109.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 2241042    to: 2243130    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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